RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
SMPDL3B-206ENST00000549094 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
SMPDL3B-206ENST00000549094 ABCC9O60706 1549 aa24.76■■□□□ 1.55
SMPDL3B-206ENST00000549094 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
SMPDL3B-206ENST00000549094 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
SMPDL3B-206ENST00000549094 NACADO15069 1562 aa23.84■■□□□ 1.41
SMPDL3B-206ENST00000549094 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
SMPDL3B-206ENST00000549094 MYO15BQ96JP2 1530 aa23.7■■□□□ 1.38
SMPDL3B-206ENST00000549094 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
SMPDL3B-206ENST00000549094 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.34
SMPDL3B-206ENST00000549094 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
SMPDL3B-206ENST00000549094 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
SMPDL3B-206ENST00000549094 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMPDL3B-206ENST00000549094 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
SMPDL3B-206ENST00000549094 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
SMPDL3B-206ENST00000549094 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
SMPDL3B-206ENST00000549094 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
SMPDL3B-206ENST00000549094 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
SMPDL3B-206ENST00000549094 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
SMPDL3B-206ENST00000549094 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
SMPDL3B-206ENST00000549094 HRCP23327 699 aa22.2■■□□□ 1.15
SMPDL3B-206ENST00000549094 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
SMPDL3B-206ENST00000549094 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
SMPDL3B-206ENST00000549094 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
SMPDL3B-206ENST00000549094 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
SMPDL3B-206ENST00000549094 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
SMPDL3B-206ENST00000549094 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
SMPDL3B-206ENST00000549094 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
SMPDL3B-206ENST00000549094 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
SMPDL3B-206ENST00000549094 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
SMPDL3B-206ENST00000549094 WIZO95785 1651 aa21.84■■□□□ 1.09
SMPDL3B-206ENST00000549094 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
SMPDL3B-206ENST00000549094 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
SMPDL3B-206ENST00000549094 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
SMPDL3B-206ENST00000549094 TRIM26Q12899 539 aaPredicted RBP21.51■■□□□ 1.03
SMPDL3B-206ENST00000549094 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
SMPDL3B-206ENST00000549094 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
SMPDL3B-206ENST00000549094 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
SMPDL3B-206ENST00000549094 NESP48681 1621 aa21.39■■□□□ 1.01
SMPDL3B-206ENST00000549094 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
SMPDL3B-206ENST00000549094 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
SMPDL3B-206ENST00000549094 ZEB1P37275 1124 aaPredicted RBP21.36■■□□□ 1.01
SMPDL3B-206ENST00000549094 CUX2O14529 1486 aa21.28■■□□□ 1
SMPDL3B-206ENST00000549094 CADPSQ9ULU8 1353 aa21.27■□□□□ 0.99
SMPDL3B-206ENST00000549094 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
SMPDL3B-206ENST00000549094 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
SMPDL3B-206ENST00000549094 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
SMPDL3B-206ENST00000549094 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
SMPDL3B-206ENST00000549094 CFTRP13569 1480 aa21.15■□□□□ 0.98
SMPDL3B-206ENST00000549094 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
SMPDL3B-206ENST00000549094 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
SMPDL3B-206ENST00000549094 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
SMPDL3B-206ENST00000549094 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
SMPDL3B-206ENST00000549094 WDR62O43379 1518 aa21■□□□□ 0.95
SMPDL3B-206ENST00000549094 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
SMPDL3B-206ENST00000549094 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.93
SMPDL3B-206ENST00000549094 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
SMPDL3B-206ENST00000549094 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
SMPDL3B-206ENST00000549094 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
SMPDL3B-206ENST00000549094 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
SMPDL3B-206ENST00000549094 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
SMPDL3B-206ENST00000549094 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
SMPDL3B-206ENST00000549094 CUX1P39880 1505 aa20.66■□□□□ 0.9
SMPDL3B-206ENST00000549094 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
SMPDL3B-206ENST00000549094 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
SMPDL3B-206ENST00000549094 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
SMPDL3B-206ENST00000549094 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
SMPDL3B-206ENST00000549094 EEA1Q15075 1411 aa20.56■□□□□ 0.88
SMPDL3B-206ENST00000549094 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
SMPDL3B-206ENST00000549094 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
SMPDL3B-206ENST00000549094 TARBP1Q13395 1621 aaKnown RBP20.51■□□□□ 0.87
SMPDL3B-206ENST00000549094 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
SMPDL3B-206ENST00000549094 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
SMPDL3B-206ENST00000549094 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
SMPDL3B-206ENST00000549094 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
SMPDL3B-206ENST00000549094 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
SMPDL3B-206ENST00000549094 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
SMPDL3B-206ENST00000549094 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
SMPDL3B-206ENST00000549094 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
SMPDL3B-206ENST00000549094 SOGA1O94964 1423 aa20.44■□□□□ 0.86
SMPDL3B-206ENST00000549094 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
SMPDL3B-206ENST00000549094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
SMPDL3B-206ENST00000549094 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
SMPDL3B-206ENST00000549094 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
SMPDL3B-206ENST00000549094 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
SMPDL3B-206ENST00000549094 GOLGA3Q08378 1498 aa20.33■□□□□ 0.85
SMPDL3B-206ENST00000549094 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMPDL3B-206ENST00000549094 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
SMPDL3B-206ENST00000549094 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
SMPDL3B-206ENST00000549094 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
SMPDL3B-206ENST00000549094 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
SMPDL3B-206ENST00000549094 CHD1O14646 1710 aa20.25■□□□□ 0.83
SMPDL3B-206ENST00000549094 KIF21BO75037 1637 aa20.25■□□□□ 0.83
SMPDL3B-206ENST00000549094 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
SMPDL3B-206ENST00000549094 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
SMPDL3B-206ENST00000549094 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
SMPDL3B-206ENST00000549094 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
SMPDL3B-206ENST00000549094 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
SMPDL3B-206ENST00000549094 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
SMPDL3B-206ENST00000549094 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms