RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.61
DNMT3B-202ENST00000328111 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
DNMT3B-202ENST00000328111 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
DNMT3B-202ENST00000328111 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
DNMT3B-202ENST00000328111 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
DNMT3B-202ENST00000328111 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
DNMT3B-202ENST00000328111 PCGF6Q9BYE7 350 aa22.05■■□□□ 1.12
DNMT3B-202ENST00000328111 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
DNMT3B-202ENST00000328111 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
DNMT3B-202ENST00000328111 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
DNMT3B-202ENST00000328111 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
DNMT3B-202ENST00000328111 APLP2Q06481 763 aa21.41■■□□□ 1.02
DNMT3B-202ENST00000328111 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
DNMT3B-202ENST00000328111 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
DNMT3B-202ENST00000328111 HRCP23327 699 aa21.23■□□□□ 0.99
DNMT3B-202ENST00000328111 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
DNMT3B-202ENST00000328111 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
DNMT3B-202ENST00000328111 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.99
DNMT3B-202ENST00000328111 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
DNMT3B-202ENST00000328111 ABCC9O60706 1549 aa20.99■□□□□ 0.95
DNMT3B-202ENST00000328111 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
DNMT3B-202ENST00000328111 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
DNMT3B-202ENST00000328111 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
DNMT3B-202ENST00000328111 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
DNMT3B-202ENST00000328111 PELP1Q8IZL8 1130 aaKnown RBP20.63■□□□□ 0.89
DNMT3B-202ENST00000328111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
DNMT3B-202ENST00000328111 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
DNMT3B-202ENST00000328111 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
DNMT3B-202ENST00000328111 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
DNMT3B-202ENST00000328111 ITGAEP38570 1179 aa20.48■□□□□ 0.87
DNMT3B-202ENST00000328111 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
DNMT3B-202ENST00000328111 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
DNMT3B-202ENST00000328111 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
DNMT3B-202ENST00000328111 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
DNMT3B-202ENST00000328111 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
DNMT3B-202ENST00000328111 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
DNMT3B-202ENST00000328111 NEFLP07196 543 aa20.02■□□□□ 0.79
DNMT3B-202ENST00000328111 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
DNMT3B-202ENST00000328111 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
DNMT3B-202ENST00000328111 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
DNMT3B-202ENST00000328111 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
DNMT3B-202ENST00000328111 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
DNMT3B-202ENST00000328111 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
DNMT3B-202ENST00000328111 POLR3GLQ9BT43 218 aa19.81■□□□□ 0.76
DNMT3B-202ENST00000328111 NACADO15069 1562 aa19.79■□□□□ 0.76
DNMT3B-202ENST00000328111 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
DNMT3B-202ENST00000328111 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
DNMT3B-202ENST00000328111 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
DNMT3B-202ENST00000328111 ACIN1Q9UKV3 1341 aaKnown RBP19.72■□□□□ 0.75
DNMT3B-202ENST00000328111 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
DNMT3B-202ENST00000328111 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
DNMT3B-202ENST00000328111 CLIP1P30622 1438 aa19.6■□□□□ 0.73
DNMT3B-202ENST00000328111 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
DNMT3B-202ENST00000328111 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
DNMT3B-202ENST00000328111 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
DNMT3B-202ENST00000328111 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
DNMT3B-202ENST00000328111 MYT1LQ9UL68 1186 aa19.54■□□□□ 0.72
DNMT3B-202ENST00000328111 EEA1Q15075 1411 aa19.54■□□□□ 0.72
DNMT3B-202ENST00000328111 FBLN2P98095 1184 aa19.51■□□□□ 0.71
DNMT3B-202ENST00000328111 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
DNMT3B-202ENST00000328111 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
DNMT3B-202ENST00000328111 BCANQ96GW7 911 aa19.49■□□□□ 0.71
DNMT3B-202ENST00000328111 ANP32CO43423 234 aa19.47■□□□□ 0.71
DNMT3B-202ENST00000328111 SOGA1O94964 1423 aa19.46■□□□□ 0.71
DNMT3B-202ENST00000328111 MYT1Q01538 1121 aa19.45■□□□□ 0.7
DNMT3B-202ENST00000328111 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
DNMT3B-202ENST00000328111 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
DNMT3B-202ENST00000328111 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
DNMT3B-202ENST00000328111 MIER1Q8N108 512 aa19.39■□□□□ 0.69
DNMT3B-202ENST00000328111 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
DNMT3B-202ENST00000328111 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
DNMT3B-202ENST00000328111 DDX10Q13206 875 aaKnown RBP19.34■□□□□ 0.69
DNMT3B-202ENST00000328111 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
DNMT3B-202ENST00000328111 WIZO95785 1651 aa19.3■□□□□ 0.68
DNMT3B-202ENST00000328111 ZNF777Q9ULD5 760 aaPredicted RBP19.29■□□□□ 0.68
DNMT3B-202ENST00000328111 CHIC2Q9UKJ5 165 aa19.27■□□□□ 0.68
DNMT3B-202ENST00000328111 TONSLQ96HA7 1378 aa19.27■□□□□ 0.67
DNMT3B-202ENST00000328111 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
DNMT3B-202ENST00000328111 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
DNMT3B-202ENST00000328111 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
DNMT3B-202ENST00000328111 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
DNMT3B-202ENST00000328111 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
DNMT3B-202ENST00000328111 FKBP8Q14318 412 aa19.11■□□□□ 0.65
DNMT3B-202ENST00000328111 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
DNMT3B-202ENST00000328111 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
DNMT3B-202ENST00000328111 HNRNPUQ00839 825 aaKnown RBP eCLIP19.07■□□□□ 0.64
DNMT3B-202ENST00000328111 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
DNMT3B-202ENST00000328111 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
DNMT3B-202ENST00000328111 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
DNMT3B-202ENST00000328111 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
DNMT3B-202ENST00000328111 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
DNMT3B-202ENST00000328111 CUX2O14529 1486 aa19■□□□□ 0.63
DNMT3B-202ENST00000328111 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
DNMT3B-202ENST00000328111 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
DNMT3B-202ENST00000328111 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
DNMT3B-202ENST00000328111 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
DNMT3B-202ENST00000328111 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
DNMT3B-202ENST00000328111 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
DNMT3B-202ENST00000328111 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
DNMT3B-202ENST00000328111 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms