RNA–Protein interactions for RNA: ENST00000303145.11

MDM1-201, Transcript of Mdm1 nuclear protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MDM1, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-201ENST00000303145 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
MDM1-201ENST00000303145 HRCP23327 699 aa22.78■■□□□ 1.24
MDM1-201ENST00000303145 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
MDM1-201ENST00000303145 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
MDM1-201ENST00000303145 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
MDM1-201ENST00000303145 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
MDM1-201ENST00000303145 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
MDM1-201ENST00000303145 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
MDM1-201ENST00000303145 PPARGC1BQ86YN6 1023 aaKnown RBP22.13■■□□□ 1.13
MDM1-201ENST00000303145 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
MDM1-201ENST00000303145 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
MDM1-201ENST00000303145 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.08
MDM1-201ENST00000303145 TRIM26Q12899 539 aaPredicted RBP21.69■■□□□ 1.06
MDM1-201ENST00000303145 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
MDM1-201ENST00000303145 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
MDM1-201ENST00000303145 ABCC9O60706 1549 aa21.42■■□□□ 1.02
MDM1-201ENST00000303145 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
MDM1-201ENST00000303145 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
MDM1-201ENST00000303145 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
MDM1-201ENST00000303145 MYT1Q01538 1121 aa20.96■□□□□ 0.95
MDM1-201ENST00000303145 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
MDM1-201ENST00000303145 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
MDM1-201ENST00000303145 NEUROD1Q13562 356 aa20.86■□□□□ 0.93
MDM1-201ENST00000303145 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
MDM1-201ENST00000303145 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
MDM1-201ENST00000303145 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
MDM1-201ENST00000303145 CENPBP07199 599 aaPredicted RBP20.69■□□□□ 0.9
MDM1-201ENST00000303145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.9
MDM1-201ENST00000303145 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
MDM1-201ENST00000303145 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
MDM1-201ENST00000303145 CCER1Q8TC90 406 aaPredicted RBP20.61■□□□□ 0.89
MDM1-201ENST00000303145 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
MDM1-201ENST00000303145 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
MDM1-201ENST00000303145 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
MDM1-201ENST00000303145 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
MDM1-201ENST00000303145 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
MDM1-201ENST00000303145 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
MDM1-201ENST00000303145 WIZO95785 1651 aa20.3■□□□□ 0.84
MDM1-201ENST00000303145 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
MDM1-201ENST00000303145 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
MDM1-201ENST00000303145 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
MDM1-201ENST00000303145 NACADO15069 1562 aa20.13■□□□□ 0.81
MDM1-201ENST00000303145 YTHDC1Q96MU7 727 aaKnown RBP20.11■□□□□ 0.81
MDM1-201ENST00000303145 MIER1Q8N108 512 aa20.11■□□□□ 0.81
MDM1-201ENST00000303145 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
MDM1-201ENST00000303145 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
MDM1-201ENST00000303145 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
MDM1-201ENST00000303145 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
MDM1-201ENST00000303145 EEA1Q15075 1411 aa20.02■□□□□ 0.8
MDM1-201ENST00000303145 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
MDM1-201ENST00000303145 SOGA1O94964 1423 aa19.98■□□□□ 0.79
MDM1-201ENST00000303145 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
MDM1-201ENST00000303145 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
MDM1-201ENST00000303145 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
MDM1-201ENST00000303145 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
MDM1-201ENST00000303145 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
MDM1-201ENST00000303145 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
MDM1-201ENST00000303145 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
MDM1-201ENST00000303145 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
MDM1-201ENST00000303145 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
MDM1-201ENST00000303145 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
MDM1-201ENST00000303145 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
MDM1-201ENST00000303145 KIF21BO75037 1637 aa19.77■□□□□ 0.76
MDM1-201ENST00000303145 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
MDM1-201ENST00000303145 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
MDM1-201ENST00000303145 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
MDM1-201ENST00000303145 TSHZ2Q9NRE2 1034 aa19.69■□□□□ 0.74
MDM1-201ENST00000303145 CLIP1P30622 1438 aa19.68■□□□□ 0.74
MDM1-201ENST00000303145 ANP32EQ9BTT0 268 aa19.68■□□□□ 0.74
MDM1-201ENST00000303145 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
MDM1-201ENST00000303145 DHX57Q6P158 1386 aaKnown RBP19.62■□□□□ 0.73
MDM1-201ENST00000303145 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
MDM1-201ENST00000303145 APLP2Q06481 763 aa19.49■□□□□ 0.71
MDM1-201ENST00000303145 BCL11AQ9H165 835 aa19.49■□□□□ 0.71
MDM1-201ENST00000303145 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
MDM1-201ENST00000303145 CUX2O14529 1486 aa19.45■□□□□ 0.7
MDM1-201ENST00000303145 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
MDM1-201ENST00000303145 RRBP1Q9P2E9 1410 aaKnown RBP19.4■□□□□ 0.7
MDM1-201ENST00000303145 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
MDM1-201ENST00000303145 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
MDM1-201ENST00000303145 KCNH8Q96L42 1107 aa19.3■□□□□ 0.68
MDM1-201ENST00000303145 TOP2BQ02880 1626 aa19.27■□□□□ 0.67
MDM1-201ENST00000303145 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
MDM1-201ENST00000303145 KANK4Q5T7N3 995 aaPredicted RBP19.25■□□□□ 0.67
MDM1-201ENST00000303145 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
MDM1-201ENST00000303145 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
MDM1-201ENST00000303145 FKBP8Q14318 412 aa19.24■□□□□ 0.67
MDM1-201ENST00000303145 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
MDM1-201ENST00000303145 BCANQ96GW7 911 aa19.22■□□□□ 0.67
MDM1-201ENST00000303145 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
MDM1-201ENST00000303145 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
MDM1-201ENST00000303145 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
MDM1-201ENST00000303145 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
MDM1-201ENST00000303145 RAB3GAP2Q9H2M9 1393 aa19.13■□□□□ 0.65
MDM1-201ENST00000303145 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
MDM1-201ENST00000303145 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
MDM1-201ENST00000303145 NEFLP07196 543 aa19.09■□□□□ 0.65
MDM1-201ENST00000303145 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.65
MDM1-201ENST00000303145 CCER2I3L3R5 266 aa19.08■□□□□ 0.65
MDM1-201ENST00000303145 DDX10Q13206 875 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms