RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
SRRM1-201ENST00000323848 DCAF8L2P0C7V8 631 aa25.02■■□□□ 1.6
SRRM1-201ENST00000323848 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
SRRM1-201ENST00000323848 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
SRRM1-201ENST00000323848 EHMT2Q96KQ7 1210 aa23.07■■□□□ 1.28
SRRM1-201ENST00000323848 FAM9AQ8IZU1 332 aaPredicted RBP22.61■■□□□ 1.21
SRRM1-201ENST00000323848 ABCC9O60706 1549 aa22.38■■□□□ 1.17
SRRM1-201ENST00000323848 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
SRRM1-201ENST00000323848 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
SRRM1-201ENST00000323848 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.14
SRRM1-201ENST00000323848 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
SRRM1-201ENST00000323848 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
SRRM1-201ENST00000323848 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
SRRM1-201ENST00000323848 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.117e-8■□□□□ 9.1
SRRM1-201ENST00000323848 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
SRRM1-201ENST00000323848 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
SRRM1-201ENST00000323848 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
SRRM1-201ENST00000323848 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
SRRM1-201ENST00000323848 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
SRRM1-201ENST00000323848 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
SRRM1-201ENST00000323848 APLP2Q06481 763 aa21.17■□□□□ 0.98
SRRM1-201ENST00000323848 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
SRRM1-201ENST00000323848 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
SRRM1-201ENST00000323848 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
SRRM1-201ENST00000323848 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
SRRM1-201ENST00000323848 HRCP23327 699 aa21.08■□□□□ 0.96
SRRM1-201ENST00000323848 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
SRRM1-201ENST00000323848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
SRRM1-201ENST00000323848 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
SRRM1-201ENST00000323848 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
SRRM1-201ENST00000323848 ITGAEP38570 1179 aa20.84■□□□□ 0.93
SRRM1-201ENST00000323848 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
SRRM1-201ENST00000323848 NACADO15069 1562 aa20.78■□□□□ 0.92
SRRM1-201ENST00000323848 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
SRRM1-201ENST00000323848 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
SRRM1-201ENST00000323848 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
SRRM1-201ENST00000323848 WIZO95785 1651 aa20.55■□□□□ 0.88
SRRM1-201ENST00000323848 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
SRRM1-201ENST00000323848 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
SRRM1-201ENST00000323848 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
SRRM1-201ENST00000323848 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
SRRM1-201ENST00000323848 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
SRRM1-201ENST00000323848 SOGA1O94964 1423 aa20.38■□□□□ 0.85
SRRM1-201ENST00000323848 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
SRRM1-201ENST00000323848 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
SRRM1-201ENST00000323848 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
SRRM1-201ENST00000323848 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
SRRM1-201ENST00000323848 FBLN2P98095 1184 aa20.22■□□□□ 0.83
SRRM1-201ENST00000323848 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
SRRM1-201ENST00000323848 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
SRRM1-201ENST00000323848 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
SRRM1-201ENST00000323848 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
SRRM1-201ENST00000323848 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
SRRM1-201ENST00000323848 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
SRRM1-201ENST00000323848 CLIP1P30622 1438 aa20.04■□□□□ 0.8
SRRM1-201ENST00000323848 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
SRRM1-201ENST00000323848 ATAD2BQ9ULI0 1458 aa19.98■□□□□ 0.79
SRRM1-201ENST00000323848 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
SRRM1-201ENST00000323848 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
SRRM1-201ENST00000323848 TNIKQ9UKE5 1360 aa19.9■□□□□ 0.78
SRRM1-201ENST00000323848 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
SRRM1-201ENST00000323848 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
SRRM1-201ENST00000323848 TRIM52Q96A61 297 aa19.83■□□□□ 0.76
SRRM1-201ENST00000323848 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
SRRM1-201ENST00000323848 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
SRRM1-201ENST00000323848 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
SRRM1-201ENST00000323848 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
SRRM1-201ENST00000323848 HIRIP3Q9BW71 556 aaPredicted RBP19.77■□□□□ 0.75
SRRM1-201ENST00000323848 CEP164Q9UPV0 1460 aa19.76■□□□□ 0.75
SRRM1-201ENST00000323848 EEA1Q15075 1411 aa19.76■□□□□ 0.75
SRRM1-201ENST00000323848 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
SRRM1-201ENST00000323848 CUX2O14529 1486 aa19.75■□□□□ 0.75
SRRM1-201ENST00000323848 KIF27Q86VH2 1401 aa19.75■□□□□ 0.75
SRRM1-201ENST00000323848 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
SRRM1-201ENST00000323848 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
SRRM1-201ENST00000323848 MYT1LQ9UL68 1186 aa19.72■□□□□ 0.75
SRRM1-201ENST00000323848 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
SRRM1-201ENST00000323848 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
SRRM1-201ENST00000323848 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
SRRM1-201ENST00000323848 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
SRRM1-201ENST00000323848 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
SRRM1-201ENST00000323848 UNC13AQ9UPW8 1703 aa19.58■□□□□ 0.72
SRRM1-201ENST00000323848 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
SRRM1-201ENST00000323848 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
SRRM1-201ENST00000323848 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
SRRM1-201ENST00000323848 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
SRRM1-201ENST00000323848 MIER1Q8N108 512 aa19.54■□□□□ 0.72
SRRM1-201ENST00000323848 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
SRRM1-201ENST00000323848 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
SRRM1-201ENST00000323848 MTUS2Q5JR59 1369 aa19.52■□□□□ 0.72
SRRM1-201ENST00000323848 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
SRRM1-201ENST00000323848 NESP48681 1621 aa19.48■□□□□ 0.71
SRRM1-201ENST00000323848 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
SRRM1-201ENST00000323848 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
SRRM1-201ENST00000323848 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
SRRM1-201ENST00000323848 BCANQ96GW7 911 aa19.4■□□□□ 0.7
SRRM1-201ENST00000323848 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
SRRM1-201ENST00000323848 ACIN1Q9UKV3 1341 aaKnown RBP19.38■□□□□ 0.69
SRRM1-201ENST00000323848 FHOD3Q2V2M9 1422 aa19.38■□□□□ 0.69
SRRM1-201ENST00000323848 IGF1RP08069 1367 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms