RNA–Protein interactions for RNA: ENST00000466490.6

SRPRB-201, Transcript of SRP receptor subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRPRB, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-201ENST00000466490 NISCHQ9Y2I1 1504 aa25.93■■□□□ 1.74
SRPRB-201ENST00000466490 HRCP23327 699 aa22.75■■□□□ 1.23
SRPRB-201ENST00000466490 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.2
SRPRB-201ENST00000466490 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
SRPRB-201ENST00000466490 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
SRPRB-201ENST00000466490 PCGF6Q9BYE7 350 aa22.23■■□□□ 1.15
SRPRB-201ENST00000466490 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
SRPRB-201ENST00000466490 PPARGC1BQ86YN6 1023 aaKnown RBP22.11■■□□□ 1.13
SRPRB-201ENST00000466490 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
SRPRB-201ENST00000466490 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
SRPRB-201ENST00000466490 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
SRPRB-201ENST00000466490 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
SRPRB-201ENST00000466490 TRIM26Q12899 539 aaPredicted RBP21.68■■□□□ 1.06
SRPRB-201ENST00000466490 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
SRPRB-201ENST00000466490 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
SRPRB-201ENST00000466490 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
SRPRB-201ENST00000466490 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
SRPRB-201ENST00000466490 MYT1Q01538 1121 aa21.07■□□□□ 0.96
SRPRB-201ENST00000466490 ABCC9O60706 1549 aa20.97■□□□□ 0.95
SRPRB-201ENST00000466490 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
SRPRB-201ENST00000466490 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
SRPRB-201ENST00000466490 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
SRPRB-201ENST00000466490 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
SRPRB-201ENST00000466490 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
SRPRB-201ENST00000466490 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
SRPRB-201ENST00000466490 GTF3C3Q9Y5Q9 886 aa20.73■□□□□ 0.91
SRPRB-201ENST00000466490 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
SRPRB-201ENST00000466490 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
SRPRB-201ENST00000466490 CCER1Q8TC90 406 aaPredicted RBP20.64■□□□□ 0.9
SRPRB-201ENST00000466490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
SRPRB-201ENST00000466490 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
SRPRB-201ENST00000466490 SCRIBQ14160 1630 aa20.48■□□□□ 0.87
SRPRB-201ENST00000466490 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
SRPRB-201ENST00000466490 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
SRPRB-201ENST00000466490 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
SRPRB-201ENST00000466490 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
SRPRB-201ENST00000466490 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
SRPRB-201ENST00000466490 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
SRPRB-201ENST00000466490 WIZO95785 1651 aa20.14■□□□□ 0.81
SRPRB-201ENST00000466490 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
SRPRB-201ENST00000466490 MIER1Q8N108 512 aa20.09■□□□□ 0.81
SRPRB-201ENST00000466490 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.81
SRPRB-201ENST00000466490 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
SRPRB-201ENST00000466490 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
SRPRB-201ENST00000466490 CLSPNQ9HAW4 1339 aa19.97■□□□□ 0.79
SRPRB-201ENST00000466490 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
SRPRB-201ENST00000466490 NACADO15069 1562 aa19.93■□□□□ 0.78
SRPRB-201ENST00000466490 EEA1Q15075 1411 aa19.93■□□□□ 0.78
SRPRB-201ENST00000466490 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
SRPRB-201ENST00000466490 SOGA1O94964 1423 aa19.87■□□□□ 0.77
SRPRB-201ENST00000466490 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
SRPRB-201ENST00000466490 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
SRPRB-201ENST00000466490 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
SRPRB-201ENST00000466490 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
SRPRB-201ENST00000466490 SUPT16HQ9Y5B9 1047 aaKnown RBP19.8■□□□□ 0.76
SRPRB-201ENST00000466490 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
SRPRB-201ENST00000466490 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
SRPRB-201ENST00000466490 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
SRPRB-201ENST00000466490 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
SRPRB-201ENST00000466490 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
SRPRB-201ENST00000466490 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
SRPRB-201ENST00000466490 KIF21BO75037 1637 aa19.62■□□□□ 0.73
SRPRB-201ENST00000466490 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
SRPRB-201ENST00000466490 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
SRPRB-201ENST00000466490 CLIP1P30622 1438 aa19.6■□□□□ 0.73
SRPRB-201ENST00000466490 APLP2Q06481 763 aa19.55■□□□□ 0.72
SRPRB-201ENST00000466490 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
SRPRB-201ENST00000466490 BCL11AQ9H165 835 aa19.52■□□□□ 0.71
SRPRB-201ENST00000466490 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
SRPRB-201ENST00000466490 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
SRPRB-201ENST00000466490 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
SRPRB-201ENST00000466490 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
SRPRB-201ENST00000466490 CUX2O14529 1486 aa19.31■□□□□ 0.68
SRPRB-201ENST00000466490 RRBP1Q9P2E9 1410 aaKnown RBP19.28■□□□□ 0.68
SRPRB-201ENST00000466490 FKBP8Q14318 412 aa19.26■□□□□ 0.67
SRPRB-201ENST00000466490 BCANQ96GW7 911 aa19.25■□□□□ 0.67
SRPRB-201ENST00000466490 KCNH8Q96L42 1107 aa19.25■□□□□ 0.67
SRPRB-201ENST00000466490 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
SRPRB-201ENST00000466490 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
SRPRB-201ENST00000466490 PEG3Q9GZU2 1588 aa19.21■□□□□ 0.67
SRPRB-201ENST00000466490 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
SRPRB-201ENST00000466490 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
SRPRB-201ENST00000466490 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
SRPRB-201ENST00000466490 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
SRPRB-201ENST00000466490 NEFLP07196 543 aa19.17■□□□□ 0.66
SRPRB-201ENST00000466490 CCNB3Q8WWL7 1395 aa19.14■□□□□ 0.65
SRPRB-201ENST00000466490 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
SRPRB-201ENST00000466490 MAPKBP1O60336 1514 aa19.11■□□□□ 0.65
SRPRB-201ENST00000466490 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
SRPRB-201ENST00000466490 DDX10Q13206 875 aaKnown RBP19.07■□□□□ 0.64
SRPRB-201ENST00000466490 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
SRPRB-201ENST00000466490 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
SRPRB-201ENST00000466490 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
SRPRB-201ENST00000466490 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
SRPRB-201ENST00000466490 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
SRPRB-201ENST00000466490 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
SRPRB-201ENST00000466490 MSH5O43196 834 aa19.01■□□□□ 0.63
SRPRB-201ENST00000466490 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
SRPRB-201ENST00000466490 ITGAEP38570 1179 aa18.98■□□□□ 0.63
SRPRB-201ENST00000466490 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms