RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
TNFSF13B-206ENST00000542136 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
TNFSF13B-206ENST00000542136 ABCC9O60706 1549 aa28.88■■■□□ 2.21
TNFSF13B-206ENST00000542136 NACADO15069 1562 aa27.92■■■□□ 2.06
TNFSF13B-206ENST00000542136 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
TNFSF13B-206ENST00000542136 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
TNFSF13B-206ENST00000542136 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
TNFSF13B-206ENST00000542136 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
TNFSF13B-206ENST00000542136 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
TNFSF13B-206ENST00000542136 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
TNFSF13B-206ENST00000542136 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
TNFSF13B-206ENST00000542136 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
TNFSF13B-206ENST00000542136 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
TNFSF13B-206ENST00000542136 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
TNFSF13B-206ENST00000542136 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
TNFSF13B-206ENST00000542136 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
TNFSF13B-206ENST00000542136 CC2D2AQ9P2K1 1620 aa26.16■■□□□ 1.78
TNFSF13B-206ENST00000542136 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
TNFSF13B-206ENST00000542136 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
TNFSF13B-206ENST00000542136 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
TNFSF13B-206ENST00000542136 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
TNFSF13B-206ENST00000542136 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
TNFSF13B-206ENST00000542136 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
TNFSF13B-206ENST00000542136 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
TNFSF13B-206ENST00000542136 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
TNFSF13B-206ENST00000542136 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
TNFSF13B-206ENST00000542136 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
TNFSF13B-206ENST00000542136 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
TNFSF13B-206ENST00000542136 WIZO95785 1651 aa25.36■■□□□ 1.65
TNFSF13B-206ENST00000542136 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
TNFSF13B-206ENST00000542136 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
TNFSF13B-206ENST00000542136 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
TNFSF13B-206ENST00000542136 NESP48681 1621 aa25■■□□□ 1.59
TNFSF13B-206ENST00000542136 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
TNFSF13B-206ENST00000542136 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
TNFSF13B-206ENST00000542136 CFTRP13569 1480 aa24.87■■□□□ 1.57
TNFSF13B-206ENST00000542136 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
TNFSF13B-206ENST00000542136 CUX2O14529 1486 aa24.73■■□□□ 1.55
TNFSF13B-206ENST00000542136 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
TNFSF13B-206ENST00000542136 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
TNFSF13B-206ENST00000542136 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
TNFSF13B-206ENST00000542136 THOC2Q8NI27 1593 aaKnown RBP24.64■■□□□ 1.54
TNFSF13B-206ENST00000542136 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
TNFSF13B-206ENST00000542136 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
TNFSF13B-206ENST00000542136 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
TNFSF13B-206ENST00000542136 WDR62O43379 1518 aa24.51■■□□□ 1.51
TNFSF13B-206ENST00000542136 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
TNFSF13B-206ENST00000542136 ABCC8Q09428 1581 aa24.39■■□□□ 1.5
TNFSF13B-206ENST00000542136 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
TNFSF13B-206ENST00000542136 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
TNFSF13B-206ENST00000542136 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
TNFSF13B-206ENST00000542136 CUX1P39880 1505 aa24.08■■□□□ 1.45
TNFSF13B-206ENST00000542136 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
TNFSF13B-206ENST00000542136 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
TNFSF13B-206ENST00000542136 SOGA1O94964 1423 aa24■■□□□ 1.43
TNFSF13B-206ENST00000542136 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
TNFSF13B-206ENST00000542136 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
TNFSF13B-206ENST00000542136 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
TNFSF13B-206ENST00000542136 DNAJC5Q9H3Z4 198 aa23.94■■□□□ 1.42
TNFSF13B-206ENST00000542136 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
TNFSF13B-206ENST00000542136 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
TNFSF13B-206ENST00000542136 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
TNFSF13B-206ENST00000542136 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
TNFSF13B-206ENST00000542136 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
TNFSF13B-206ENST00000542136 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
TNFSF13B-206ENST00000542136 AQRO60306 1485 aaKnown RBP eCLIP23.84■■□□□ 1.41
TNFSF13B-206ENST00000542136 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
TNFSF13B-206ENST00000542136 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
TNFSF13B-206ENST00000542136 OSCARQ8IYS5 282 aa23.73■■□□□ 1.39
TNFSF13B-206ENST00000542136 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
TNFSF13B-206ENST00000542136 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
TNFSF13B-206ENST00000542136 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
TNFSF13B-206ENST00000542136 MAGI1Q96QZ7 1491 aaPredicted RBP23.67■■□□□ 1.38
TNFSF13B-206ENST00000542136 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
TNFSF13B-206ENST00000542136 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
TNFSF13B-206ENST00000542136 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
TNFSF13B-206ENST00000542136 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
TNFSF13B-206ENST00000542136 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
TNFSF13B-206ENST00000542136 CHD1O14646 1710 aa23.53■■□□□ 1.36
TNFSF13B-206ENST00000542136 FBLN2P98095 1184 aa23.52■■□□□ 1.36
TNFSF13B-206ENST00000542136 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
TNFSF13B-206ENST00000542136 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
TNFSF13B-206ENST00000542136 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
TNFSF13B-206ENST00000542136 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
TNFSF13B-206ENST00000542136 IGF1RP08069 1367 aa23.41■■□□□ 1.34
TNFSF13B-206ENST00000542136 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
TNFSF13B-206ENST00000542136 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
TNFSF13B-206ENST00000542136 NUP160Q12769 1436 aa23.32■■□□□ 1.32
TNFSF13B-206ENST00000542136 CUL7Q14999 1698 aa23.32■■□□□ 1.32
TNFSF13B-206ENST00000542136 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
TNFSF13B-206ENST00000542136 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
TNFSF13B-206ENST00000542136 RIMBP3CA6NJZ7 1639 aa23.23■■□□□ 1.31
TNFSF13B-206ENST00000542136 RIMBP3BA6NNM3 1639 aa23.23■■□□□ 1.31
TNFSF13B-206ENST00000542136 RIMBP3Q9UFD9 1639 aa23.23■■□□□ 1.31
TNFSF13B-206ENST00000542136 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
TNFSF13B-206ENST00000542136 RUSC2Q8N2Y8 1516 aa23.19■■□□□ 1.3
TNFSF13B-206ENST00000542136 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
TNFSF13B-206ENST00000542136 EEA1Q15075 1411 aa23.13■■□□□ 1.29
TNFSF13B-206ENST00000542136 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
TNFSF13B-206ENST00000542136 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms