RNA–Protein interactions for RNA: ENST00000367868.3

GPA33-201, Transcript of glycoprotein A33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPA33, Length 2,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-201ENST00000367868 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
GPA33-201ENST00000367868 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
GPA33-201ENST00000367868 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
GPA33-201ENST00000367868 HRCP23327 699 aa22.64■■□□□ 1.22
GPA33-201ENST00000367868 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
GPA33-201ENST00000367868 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
GPA33-201ENST00000367868 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
GPA33-201ENST00000367868 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
GPA33-201ENST00000367868 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
GPA33-201ENST00000367868 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
GPA33-201ENST00000367868 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
GPA33-201ENST00000367868 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
GPA33-201ENST00000367868 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
GPA33-201ENST00000367868 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
GPA33-201ENST00000367868 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
GPA33-201ENST00000367868 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1.01
GPA33-201ENST00000367868 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1
GPA33-201ENST00000367868 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
GPA33-201ENST00000367868 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
GPA33-201ENST00000367868 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
GPA33-201ENST00000367868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
GPA33-201ENST00000367868 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
GPA33-201ENST00000367868 ACIN1Q9UKV3 1341 aaKnown RBP20.86■□□□□ 0.93
GPA33-201ENST00000367868 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
GPA33-201ENST00000367868 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
GPA33-201ENST00000367868 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.92
GPA33-201ENST00000367868 ABCC9O60706 1549 aa20.75■□□□□ 0.91
GPA33-201ENST00000367868 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
GPA33-201ENST00000367868 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
GPA33-201ENST00000367868 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
GPA33-201ENST00000367868 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
GPA33-201ENST00000367868 CENPBP07199 599 aaPredicted RBP20.6■□□□□ 0.89
GPA33-201ENST00000367868 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
GPA33-201ENST00000367868 MYT1Q01538 1121 aa20.34■□□□□ 0.85
GPA33-201ENST00000367868 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
GPA33-201ENST00000367868 ZNF316A6NFI3 1004 aaPredicted RBP20.26■□□□□ 0.83
GPA33-201ENST00000367868 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
GPA33-201ENST00000367868 MIER1Q8N108 512 aa20.21■□□□□ 0.83
GPA33-201ENST00000367868 WIZO95785 1651 aa20.17■□□□□ 0.82
GPA33-201ENST00000367868 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
GPA33-201ENST00000367868 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
GPA33-201ENST00000367868 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
GPA33-201ENST00000367868 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
GPA33-201ENST00000367868 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
GPA33-201ENST00000367868 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
GPA33-201ENST00000367868 SOGA1O94964 1423 aa20.01■□□□□ 0.79
GPA33-201ENST00000367868 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
GPA33-201ENST00000367868 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
GPA33-201ENST00000367868 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
GPA33-201ENST00000367868 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.78
GPA33-201ENST00000367868 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
GPA33-201ENST00000367868 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
GPA33-201ENST00000367868 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
GPA33-201ENST00000367868 NACADO15069 1562 aa19.7■□□□□ 0.74
GPA33-201ENST00000367868 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
GPA33-201ENST00000367868 APLP2Q06481 763 aa19.68■□□□□ 0.74
GPA33-201ENST00000367868 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
GPA33-201ENST00000367868 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
GPA33-201ENST00000367868 TSHZ2Q9NRE2 1034 aa19.63■□□□□ 0.73
GPA33-201ENST00000367868 CLIP1P30622 1438 aa19.61■□□□□ 0.73
GPA33-201ENST00000367868 EEA1Q15075 1411 aa19.61■□□□□ 0.73
GPA33-201ENST00000367868 BCANQ96GW7 911 aa19.59■□□□□ 0.73
GPA33-201ENST00000367868 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
GPA33-201ENST00000367868 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
GPA33-201ENST00000367868 ANP32EQ9BTT0 268 aa19.51■□□□□ 0.71
GPA33-201ENST00000367868 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
GPA33-201ENST00000367868 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
GPA33-201ENST00000367868 DHX57Q6P158 1386 aaKnown RBP19.49■□□□□ 0.71
GPA33-201ENST00000367868 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
GPA33-201ENST00000367868 ITGAEP38570 1179 aa19.44■□□□□ 0.7
GPA33-201ENST00000367868 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
GPA33-201ENST00000367868 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.7
GPA33-201ENST00000367868 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
GPA33-201ENST00000367868 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
GPA33-201ENST00000367868 FKBP8Q14318 412 aa19.37■□□□□ 0.69
GPA33-201ENST00000367868 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
GPA33-201ENST00000367868 KIF21BO75037 1637 aa19.35■□□□□ 0.69
GPA33-201ENST00000367868 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.67
GPA33-201ENST00000367868 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
GPA33-201ENST00000367868 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
GPA33-201ENST00000367868 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
GPA33-201ENST00000367868 RBM19Q9Y4C8 960 aaKnown RBP19.2■□□□□ 0.66
GPA33-201ENST00000367868 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
GPA33-201ENST00000367868 NEFLP07196 543 aa19.15■□□□□ 0.66
GPA33-201ENST00000367868 SIN3AQ96ST3 1273 aa19.14■□□□□ 0.65
GPA33-201ENST00000367868 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
GPA33-201ENST00000367868 CCNB3Q8WWL7 1395 aa19.11■□□□□ 0.65
GPA33-201ENST00000367868 RAB3GAP2Q9H2M9 1393 aa19.1■□□□□ 0.65
GPA33-201ENST00000367868 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
GPA33-201ENST00000367868 MSH5O43196 834 aa19.02■□□□□ 0.64
GPA33-201ENST00000367868 IRX6P78412 446 aaPredicted RBP19.02■□□□□ 0.64
GPA33-201ENST00000367868 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
GPA33-201ENST00000367868 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
GPA33-201ENST00000367868 FAM50AQ14320 339 aaKnown RBP19■□□□□ 0.63
GPA33-201ENST00000367868 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
GPA33-201ENST00000367868 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
GPA33-201ENST00000367868 CUX2O14529 1486 aa18.97■□□□□ 0.63
GPA33-201ENST00000367868 ANP32CO43423 234 aa18.96■□□□□ 0.63
GPA33-201ENST00000367868 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
GPA33-201ENST00000367868 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms