RNA–Protein interactions for RNA: ENST00000520835.5

IKBKB-218, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2 BASIC

Gene IKBKB, Length 2,403 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-218ENST00000520835 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
IKBKB-218ENST00000520835 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
IKBKB-218ENST00000520835 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
IKBKB-218ENST00000520835 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
IKBKB-218ENST00000520835 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
IKBKB-218ENST00000520835 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
IKBKB-218ENST00000520835 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
IKBKB-218ENST00000520835 HRCP23327 699 aa22.33■■□□□ 1.17
IKBKB-218ENST00000520835 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
IKBKB-218ENST00000520835 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
IKBKB-218ENST00000520835 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
IKBKB-218ENST00000520835 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
IKBKB-218ENST00000520835 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.08
IKBKB-218ENST00000520835 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
IKBKB-218ENST00000520835 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
IKBKB-218ENST00000520835 ABCC9O60706 1549 aa21.45■■□□□ 1.02
IKBKB-218ENST00000520835 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
IKBKB-218ENST00000520835 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
IKBKB-218ENST00000520835 TRIM41Q8WV44 630 aa21.27■■□□□ 1
IKBKB-218ENST00000520835 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
IKBKB-218ENST00000520835 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
IKBKB-218ENST00000520835 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
IKBKB-218ENST00000520835 MYT1Q01538 1121 aa21.08■□□□□ 0.97
IKBKB-218ENST00000520835 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.96
IKBKB-218ENST00000520835 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
IKBKB-218ENST00000520835 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
IKBKB-218ENST00000520835 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
IKBKB-218ENST00000520835 WIZO95785 1651 aa20.81■□□□□ 0.92
IKBKB-218ENST00000520835 NACADO15069 1562 aa20.77■□□□□ 0.92
IKBKB-218ENST00000520835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
IKBKB-218ENST00000520835 EIF4G1Q04637 1599 aaKnown RBP20.61■□□□□ 0.89
IKBKB-218ENST00000520835 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
IKBKB-218ENST00000520835 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
IKBKB-218ENST00000520835 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
IKBKB-218ENST00000520835 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
IKBKB-218ENST00000520835 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
IKBKB-218ENST00000520835 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
IKBKB-218ENST00000520835 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
IKBKB-218ENST00000520835 SOGA1O94964 1423 aa20.41■□□□□ 0.86
IKBKB-218ENST00000520835 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.86
IKBKB-218ENST00000520835 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
IKBKB-218ENST00000520835 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
IKBKB-218ENST00000520835 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
IKBKB-218ENST00000520835 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
IKBKB-218ENST00000520835 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
IKBKB-218ENST00000520835 SMARCA4P51532 1647 aa20.33■□□□□ 0.84
IKBKB-218ENST00000520835 TNIKQ9UKE5 1360 aa20.29■□□□□ 0.84
IKBKB-218ENST00000520835 GTF3C3Q9Y5Q9 886 aa20.28■□□□□ 0.84
IKBKB-218ENST00000520835 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
IKBKB-218ENST00000520835 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
IKBKB-218ENST00000520835 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
IKBKB-218ENST00000520835 CENPBP07199 599 aaPredicted RBP20.15■□□□□ 0.82
IKBKB-218ENST00000520835 ZNF316A6NFI3 1004 aaPredicted RBP20.13■□□□□ 0.81
IKBKB-218ENST00000520835 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
IKBKB-218ENST00000520835 EEA1Q15075 1411 aa20.09■□□□□ 0.81
IKBKB-218ENST00000520835 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
IKBKB-218ENST00000520835 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
IKBKB-218ENST00000520835 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
IKBKB-218ENST00000520835 MIER1Q8N108 512 aa20.01■□□□□ 0.79
IKBKB-218ENST00000520835 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
IKBKB-218ENST00000520835 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
IKBKB-218ENST00000520835 CLIP1P30622 1438 aa19.91■□□□□ 0.78
IKBKB-218ENST00000520835 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
IKBKB-218ENST00000520835 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
IKBKB-218ENST00000520835 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
IKBKB-218ENST00000520835 RAPGEF2Q9Y4G8 1499 aa19.84■□□□□ 0.77
IKBKB-218ENST00000520835 KIF21BO75037 1637 aa19.83■□□□□ 0.77
IKBKB-218ENST00000520835 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.77
IKBKB-218ENST00000520835 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
IKBKB-218ENST00000520835 APLP2Q06481 763 aa19.73■□□□□ 0.75
IKBKB-218ENST00000520835 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
IKBKB-218ENST00000520835 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
IKBKB-218ENST00000520835 DHX57Q6P158 1386 aaKnown RBP19.64■□□□□ 0.74
IKBKB-218ENST00000520835 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
IKBKB-218ENST00000520835 ARAP1Q96P48 1450 aa19.58■□□□□ 0.73
IKBKB-218ENST00000520835 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
IKBKB-218ENST00000520835 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
IKBKB-218ENST00000520835 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
IKBKB-218ENST00000520835 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
IKBKB-218ENST00000520835 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
IKBKB-218ENST00000520835 RRBP1Q9P2E9 1410 aaKnown RBP19.43■□□□□ 0.7
IKBKB-218ENST00000520835 CUX1P39880 1505 aa19.43■□□□□ 0.7
IKBKB-218ENST00000520835 ITGAEP38570 1179 aa19.41■□□□□ 0.7
IKBKB-218ENST00000520835 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
IKBKB-218ENST00000520835 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
IKBKB-218ENST00000520835 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
IKBKB-218ENST00000520835 CUX2O14529 1486 aa19.35■□□□□ 0.69
IKBKB-218ENST00000520835 KIF27Q86VH2 1401 aa19.32■□□□□ 0.68
IKBKB-218ENST00000520835 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
IKBKB-218ENST00000520835 RAB3GAP2Q9H2M9 1393 aa19.28■□□□□ 0.68
IKBKB-218ENST00000520835 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
IKBKB-218ENST00000520835 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
IKBKB-218ENST00000520835 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
IKBKB-218ENST00000520835 TSHZ2Q9NRE2 1034 aa19.24■□□□□ 0.67
IKBKB-218ENST00000520835 CFTRP13569 1480 aa19.23■□□□□ 0.67
IKBKB-218ENST00000520835 SIN3AQ96ST3 1273 aa19.21■□□□□ 0.67
IKBKB-218ENST00000520835 IGF1RP08069 1367 aa19.2■□□□□ 0.66
IKBKB-218ENST00000520835 PHLDB1Q86UU1 1377 aa19.16■□□□□ 0.66
IKBKB-218ENST00000520835 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
IKBKB-218ENST00000520835 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms