RNA–Protein interactions for RNA: ENST00000265909.8

SNX19-201, Transcript of sorting nexin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX19, Length 6,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-201ENST00000265909 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
SNX19-201ENST00000265909 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
SNX19-201ENST00000265909 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
SNX19-201ENST00000265909 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
SNX19-201ENST00000265909 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
SNX19-201ENST00000265909 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
SNX19-201ENST00000265909 APLP2Q06481 763 aa22.79■■□□□ 1.24
SNX19-201ENST00000265909 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
SNX19-201ENST00000265909 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
SNX19-201ENST00000265909 ERICH6Q7L0X2 663 aa22.55■■□□□ 1.2
SNX19-201ENST00000265909 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
SNX19-201ENST00000265909 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
SNX19-201ENST00000265909 YTHDC1Q96MU7 727 aaKnown RBP22.09■■□□□ 1.13
SNX19-201ENST00000265909 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
SNX19-201ENST00000265909 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
SNX19-201ENST00000265909 MYT1Q01538 1121 aa21.95■■□□□ 1.1
SNX19-201ENST00000265909 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
SNX19-201ENST00000265909 NEFLP07196 543 aa21.78■■□□□ 1.08
SNX19-201ENST00000265909 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
SNX19-201ENST00000265909 NISCHQ9Y2I1 1504 aa21.74■■□□□ 1.07
SNX19-201ENST00000265909 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
SNX19-201ENST00000265909 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
SNX19-201ENST00000265909 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
SNX19-201ENST00000265909 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
SNX19-201ENST00000265909 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
SNX19-201ENST00000265909 ITGAEP38570 1179 aa21.51■■□□□ 1.03
SNX19-201ENST00000265909 ZEB1P37275 1124 aaPredicted RBP21.47■■□□□ 1.03
SNX19-201ENST00000265909 DAXXQ9UER7 740 aaPredicted RBP21.46■■□□□ 1.03
SNX19-201ENST00000265909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
SNX19-201ENST00000265909 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
SNX19-201ENST00000265909 SLC4A1APQ9BWU0 796 aaKnown RBP21.4■■□□□ 1.02
SNX19-201ENST00000265909 CLSPNQ9HAW4 1339 aa21.03■□□□□ 0.96
SNX19-201ENST00000265909 BCL11AQ9H165 835 aa20.98■□□□□ 0.95
SNX19-201ENST00000265909 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
SNX19-201ENST00000265909 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
SNX19-201ENST00000265909 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
SNX19-201ENST00000265909 HRCP23327 699 aa20.81■□□□□ 0.92
SNX19-201ENST00000265909 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
SNX19-201ENST00000265909 RTL5Q5HYW3 569 aaPredicted RBP20.77■□□□□ 0.92
SNX19-201ENST00000265909 BCANQ96GW7 911 aa20.74■□□□□ 0.91
SNX19-201ENST00000265909 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
SNX19-201ENST00000265909 TRIM52Q96A61 297 aa20.66■□□□□ 0.9
SNX19-201ENST00000265909 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
SNX19-201ENST00000265909 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.9
SNX19-201ENST00000265909 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
SNX19-201ENST00000265909 DIEXFQ68CQ4 756 aaKnown RBP20.46■□□□□ 0.87
SNX19-201ENST00000265909 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
SNX19-201ENST00000265909 CANXP27824 592 aaKnown RBP20.4■□□□□ 0.86
SNX19-201ENST00000265909 FBLN2P98095 1184 aa20.39■□□□□ 0.85
SNX19-201ENST00000265909 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
SNX19-201ENST00000265909 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
SNX19-201ENST00000265909 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
SNX19-201ENST00000265909 ANP32CO43423 234 aa20.2■□□□□ 0.82
SNX19-201ENST00000265909 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
SNX19-201ENST00000265909 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
SNX19-201ENST00000265909 NEFMP07197 916 aa20.12■□□□□ 0.81
SNX19-201ENST00000265909 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
SNX19-201ENST00000265909 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
SNX19-201ENST00000265909 EIF5BO60841 1220 aaKnown RBP19.99■□□□□ 0.79
SNX19-201ENST00000265909 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
SNX19-201ENST00000265909 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
SNX19-201ENST00000265909 ARXQ96QS3 562 aa19.96■□□□□ 0.79
SNX19-201ENST00000265909 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
SNX19-201ENST00000265909 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
SNX19-201ENST00000265909 A0A0G2JS52 829 aa19.93■□□□□ 0.78
SNX19-201ENST00000265909 HSP90AA1P07900 732 aaKnown RBP19.92■□□□□ 0.78
SNX19-201ENST00000265909 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
SNX19-201ENST00000265909 ANP32AP39687 249 aaKnown RBP19.91■□□□□ 0.78
SNX19-201ENST00000265909 STAG3Q9UJ98 1225 aa19.89■□□□□ 0.77
SNX19-201ENST00000265909 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
SNX19-201ENST00000265909 ANP32BQ92688 251 aaKnown RBP19.78■□□□□ 0.76
SNX19-201ENST00000265909 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
SNX19-201ENST00000265909 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
SNX19-201ENST00000265909 FKBP8Q14318 412 aa19.73■□□□□ 0.75
SNX19-201ENST00000265909 NBR1Q14596 966 aa19.72■□□□□ 0.75
SNX19-201ENST00000265909 ABCC9O60706 1549 aa19.69■□□□□ 0.74
SNX19-201ENST00000265909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNX19-201ENST00000265909 TULP1O00294 542 aaPredicted RBP19.64■□□□□ 0.73
SNX19-201ENST00000265909 HNRNPUQ00839 825 aaKnown RBP eCLIP19.62■□□□□ 0.73
SNX19-201ENST00000265909 UPF2Q9HAU5 1272 aaKnown RBP19.61■□□□□ 0.73
SNX19-201ENST00000265909 TPRNQ4KMQ1 711 aa19.58■□□□□ 0.72
SNX19-201ENST00000265909 IRX6P78412 446 aaPredicted RBP19.56■□□□□ 0.72
SNX19-201ENST00000265909 C14orf37Q86TY3 774 aa19.56■□□□□ 0.72
SNX19-201ENST00000265909 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
SNX19-201ENST00000265909 CHIC2Q9UKJ5 165 aa19.55■□□□□ 0.72
SNX19-201ENST00000265909 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
SNX19-201ENST00000265909 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
SNX19-201ENST00000265909 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
SNX19-201ENST00000265909 CDK11BP21127 795 aaKnown RBP19.51■□□□□ 0.71
SNX19-201ENST00000265909 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
SNX19-201ENST00000265909 HIRIP3Q9BW71 556 aaPredicted RBP19.46■□□□□ 0.71
SNX19-201ENST00000265909 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
SNX19-201ENST00000265909 CCDC136Q96JN2 1154 aa19.44■□□□□ 0.7
SNX19-201ENST00000265909 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNX19-201ENST00000265909 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
SNX19-201ENST00000265909 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
SNX19-201ENST00000265909 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
SNX19-201ENST00000265909 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
SNX19-201ENST00000265909 HAP1P54257 671 aaPredicted RBP19.3■□□□□ 0.68
SNX19-201ENST00000265909 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms