RNA–Protein interactions for RNA: ENST00000538346.5

PDE1B-203, Transcript of phosphodiesterase 1B, humanhuman

TSL 2 BASIC

Gene PDE1B, Length 1,711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-203ENST00000538346 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
PDE1B-203ENST00000538346 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
PDE1B-203ENST00000538346 ABCC9O60706 1549 aa24.27■■□□□ 1.48
PDE1B-203ENST00000538346 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
PDE1B-203ENST00000538346 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
PDE1B-203ENST00000538346 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
PDE1B-203ENST00000538346 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
PDE1B-203ENST00000538346 NACADO15069 1562 aa23.49■■□□□ 1.35
PDE1B-203ENST00000538346 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
PDE1B-203ENST00000538346 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
PDE1B-203ENST00000538346 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
PDE1B-203ENST00000538346 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
PDE1B-203ENST00000538346 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
PDE1B-203ENST00000538346 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
PDE1B-203ENST00000538346 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
PDE1B-203ENST00000538346 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
PDE1B-203ENST00000538346 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
PDE1B-203ENST00000538346 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
PDE1B-203ENST00000538346 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
PDE1B-203ENST00000538346 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
PDE1B-203ENST00000538346 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
PDE1B-203ENST00000538346 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
PDE1B-203ENST00000538346 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
PDE1B-203ENST00000538346 WIZO95785 1651 aa21.99■■□□□ 1.11
PDE1B-203ENST00000538346 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
PDE1B-203ENST00000538346 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
PDE1B-203ENST00000538346 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
PDE1B-203ENST00000538346 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
PDE1B-203ENST00000538346 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
PDE1B-203ENST00000538346 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
PDE1B-203ENST00000538346 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
PDE1B-203ENST00000538346 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
PDE1B-203ENST00000538346 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
PDE1B-203ENST00000538346 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
PDE1B-203ENST00000538346 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
PDE1B-203ENST00000538346 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
PDE1B-203ENST00000538346 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
PDE1B-203ENST00000538346 HRCP23327 699 aa21.34■■□□□ 1.01
PDE1B-203ENST00000538346 ABCC8Q09428 1581 aa21.33■■□□□ 1
PDE1B-203ENST00000538346 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
PDE1B-203ENST00000538346 NESP48681 1621 aa21.15■□□□□ 0.98
PDE1B-203ENST00000538346 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
PDE1B-203ENST00000538346 EEA1Q15075 1411 aa21.1■□□□□ 0.97
PDE1B-203ENST00000538346 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
PDE1B-203ENST00000538346 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.97
PDE1B-203ENST00000538346 CFTRP13569 1480 aa21.06■□□□□ 0.96
PDE1B-203ENST00000538346 SOGA1O94964 1423 aa21.06■□□□□ 0.96
PDE1B-203ENST00000538346 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
PDE1B-203ENST00000538346 SYNJ1O43426 1573 aa21■□□□□ 0.95
PDE1B-203ENST00000538346 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
PDE1B-203ENST00000538346 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
PDE1B-203ENST00000538346 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
PDE1B-203ENST00000538346 TNIKQ9UKE5 1360 aa20.92■□□□□ 0.94
PDE1B-203ENST00000538346 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
PDE1B-203ENST00000538346 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.93
PDE1B-203ENST00000538346 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
PDE1B-203ENST00000538346 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
PDE1B-203ENST00000538346 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
PDE1B-203ENST00000538346 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
PDE1B-203ENST00000538346 TOP2BQ02880 1626 aa20.84■□□□□ 0.93
PDE1B-203ENST00000538346 KIF21BO75037 1637 aa20.82■□□□□ 0.92
PDE1B-203ENST00000538346 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
PDE1B-203ENST00000538346 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
PDE1B-203ENST00000538346 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
PDE1B-203ENST00000538346 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
PDE1B-203ENST00000538346 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
PDE1B-203ENST00000538346 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
PDE1B-203ENST00000538346 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
PDE1B-203ENST00000538346 CUX1P39880 1505 aa20.65■□□□□ 0.9
PDE1B-203ENST00000538346 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.89
PDE1B-203ENST00000538346 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
PDE1B-203ENST00000538346 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
PDE1B-203ENST00000538346 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
PDE1B-203ENST00000538346 WDR62O43379 1518 aa20.57■□□□□ 0.88
PDE1B-203ENST00000538346 CLIP1P30622 1438 aa20.55■□□□□ 0.88
PDE1B-203ENST00000538346 ERICH3Q5RHP9 1530 aa20.55■□□□□ 0.88
PDE1B-203ENST00000538346 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
PDE1B-203ENST00000538346 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
PDE1B-203ENST00000538346 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
PDE1B-203ENST00000538346 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
PDE1B-203ENST00000538346 VPS8Q8N3P4 1428 aa20.47■□□□□ 0.87
PDE1B-203ENST00000538346 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
PDE1B-203ENST00000538346 CUX2O14529 1486 aa20.41■□□□□ 0.86
PDE1B-203ENST00000538346 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
PDE1B-203ENST00000538346 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.85
PDE1B-203ENST00000538346 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
PDE1B-203ENST00000538346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
PDE1B-203ENST00000538346 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
PDE1B-203ENST00000538346 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
PDE1B-203ENST00000538346 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
PDE1B-203ENST00000538346 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
PDE1B-203ENST00000538346 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
PDE1B-203ENST00000538346 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
PDE1B-203ENST00000538346 IGF1RP08069 1367 aa20.26■□□□□ 0.83
PDE1B-203ENST00000538346 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
PDE1B-203ENST00000538346 APLP2Q06481 763 aa20.23■□□□□ 0.83
PDE1B-203ENST00000538346 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
PDE1B-203ENST00000538346 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
PDE1B-203ENST00000538346 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
PDE1B-203ENST00000538346 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms