RNA–Protein interactions for RNA: ENST00000397572.4

MYCBP-201, Transcript of MYC binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYCBP, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP-201ENST00000397572 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
MYCBP-201ENST00000397572 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
MYCBP-201ENST00000397572 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
MYCBP-201ENST00000397572 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
MYCBP-201ENST00000397572 HRCP23327 699 aa22.3■■□□□ 1.16
MYCBP-201ENST00000397572 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
MYCBP-201ENST00000397572 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
MYCBP-201ENST00000397572 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
MYCBP-201ENST00000397572 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
MYCBP-201ENST00000397572 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
MYCBP-201ENST00000397572 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
MYCBP-201ENST00000397572 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
MYCBP-201ENST00000397572 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
MYCBP-201ENST00000397572 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
MYCBP-201ENST00000397572 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
MYCBP-201ENST00000397572 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
MYCBP-201ENST00000397572 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
MYCBP-201ENST00000397572 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
MYCBP-201ENST00000397572 ABCC9O60706 1549 aa21.16■□□□□ 0.98
MYCBP-201ENST00000397572 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
MYCBP-201ENST00000397572 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
MYCBP-201ENST00000397572 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
MYCBP-201ENST00000397572 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
MYCBP-201ENST00000397572 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
MYCBP-201ENST00000397572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
MYCBP-201ENST00000397572 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
MYCBP-201ENST00000397572 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
MYCBP-201ENST00000397572 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
MYCBP-201ENST00000397572 TTBK1Q5TCY1 1321 aaPredicted RBP20.57■□□□□ 0.88
MYCBP-201ENST00000397572 WIZO95785 1651 aa20.52■□□□□ 0.87
MYCBP-201ENST00000397572 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
MYCBP-201ENST00000397572 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
MYCBP-201ENST00000397572 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
MYCBP-201ENST00000397572 NACADO15069 1562 aa20.41■□□□□ 0.86
MYCBP-201ENST00000397572 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
MYCBP-201ENST00000397572 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
MYCBP-201ENST00000397572 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
MYCBP-201ENST00000397572 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
MYCBP-201ENST00000397572 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
MYCBP-201ENST00000397572 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
MYCBP-201ENST00000397572 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
MYCBP-201ENST00000397572 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
MYCBP-201ENST00000397572 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
MYCBP-201ENST00000397572 SOGA1O94964 1423 aa20.19■□□□□ 0.82
MYCBP-201ENST00000397572 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
MYCBP-201ENST00000397572 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
MYCBP-201ENST00000397572 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
MYCBP-201ENST00000397572 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
MYCBP-201ENST00000397572 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
MYCBP-201ENST00000397572 RUSC2Q8N2Y8 1516 aa20.06■□□□□ 0.8
MYCBP-201ENST00000397572 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
MYCBP-201ENST00000397572 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
MYCBP-201ENST00000397572 SMARCA4P51532 1647 aa20■□□□□ 0.79
MYCBP-201ENST00000397572 EEA1Q15075 1411 aa19.98■□□□□ 0.79
MYCBP-201ENST00000397572 MIER1Q8N108 512 aa19.96■□□□□ 0.79
MYCBP-201ENST00000397572 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
MYCBP-201ENST00000397572 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
MYCBP-201ENST00000397572 APLP2Q06481 763 aa19.86■□□□□ 0.77
MYCBP-201ENST00000397572 MYT1Q01538 1121 aa19.82■□□□□ 0.76
MYCBP-201ENST00000397572 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
MYCBP-201ENST00000397572 CLIP1P30622 1438 aa19.81■□□□□ 0.76
MYCBP-201ENST00000397572 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
MYCBP-201ENST00000397572 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
MYCBP-201ENST00000397572 VPS8Q8N3P4 1428 aa19.71■□□□□ 0.75
MYCBP-201ENST00000397572 SYNJ1O43426 1573 aa19.69■□□□□ 0.74
MYCBP-201ENST00000397572 KIF21BO75037 1637 aa19.66■□□□□ 0.74
MYCBP-201ENST00000397572 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
MYCBP-201ENST00000397572 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
MYCBP-201ENST00000397572 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
MYCBP-201ENST00000397572 KANK4Q5T7N3 995 aaPredicted RBP19.48■□□□□ 0.71
MYCBP-201ENST00000397572 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
MYCBP-201ENST00000397572 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
MYCBP-201ENST00000397572 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
MYCBP-201ENST00000397572 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
MYCBP-201ENST00000397572 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
MYCBP-201ENST00000397572 ITGAEP38570 1179 aa19.43■□□□□ 0.7
MYCBP-201ENST00000397572 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
MYCBP-201ENST00000397572 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
MYCBP-201ENST00000397572 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
MYCBP-201ENST00000397572 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
MYCBP-201ENST00000397572 KCNH8Q96L42 1107 aa19.28■□□□□ 0.68
MYCBP-201ENST00000397572 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
MYCBP-201ENST00000397572 RRBP1Q9P2E9 1410 aaKnown RBP19.27■□□□□ 0.67
MYCBP-201ENST00000397572 TSHZ2Q9NRE2 1034 aa19.22■□□□□ 0.67
MYCBP-201ENST00000397572 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
MYCBP-201ENST00000397572 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
MYCBP-201ENST00000397572 BCANQ96GW7 911 aa19.2■□□□□ 0.66
MYCBP-201ENST00000397572 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
MYCBP-201ENST00000397572 RAB3GAP2Q9H2M9 1393 aa19.18■□□□□ 0.66
MYCBP-201ENST00000397572 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
MYCBP-201ENST00000397572 CUX2O14529 1486 aa19.14■□□□□ 0.66
MYCBP-201ENST00000397572 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.66
MYCBP-201ENST00000397572 CUX1P39880 1505 aa19.13■□□□□ 0.65
MYCBP-201ENST00000397572 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
MYCBP-201ENST00000397572 SIN3AQ96ST3 1273 aa19.1■□□□□ 0.65
MYCBP-201ENST00000397572 FKBP8Q14318 412 aa19.1■□□□□ 0.65
MYCBP-201ENST00000397572 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
MYCBP-201ENST00000397572 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
MYCBP-201ENST00000397572 MAPKBP1O60336 1514 aa19.06■□□□□ 0.64
MYCBP-201ENST00000397572 SETD5Q9C0A6 1442 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms