RNA–Protein interactions for RNA: ENST00000596881.1

FAM90A28P-201, Transcript of family with sequence similarity 90 member A28, pseudogene, humanhuman

TSL 5 BASIC

Gene FAM90A28P, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A28P-201ENST00000596881 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
FAM90A28P-201ENST00000596881 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
FAM90A28P-201ENST00000596881 ABCC9O60706 1549 aa26.52■■□□□ 1.84
FAM90A28P-201ENST00000596881 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
FAM90A28P-201ENST00000596881 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
FAM90A28P-201ENST00000596881 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
FAM90A28P-201ENST00000596881 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
FAM90A28P-201ENST00000596881 NACADO15069 1562 aa25.97■■□□□ 1.75
FAM90A28P-201ENST00000596881 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
FAM90A28P-201ENST00000596881 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
FAM90A28P-201ENST00000596881 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
FAM90A28P-201ENST00000596881 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
FAM90A28P-201ENST00000596881 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
FAM90A28P-201ENST00000596881 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
FAM90A28P-201ENST00000596881 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
FAM90A28P-201ENST00000596881 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
FAM90A28P-201ENST00000596881 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
FAM90A28P-201ENST00000596881 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
FAM90A28P-201ENST00000596881 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
FAM90A28P-201ENST00000596881 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
FAM90A28P-201ENST00000596881 WIZO95785 1651 aa24.17■■□□□ 1.46
FAM90A28P-201ENST00000596881 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
FAM90A28P-201ENST00000596881 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
FAM90A28P-201ENST00000596881 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.45
FAM90A28P-201ENST00000596881 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
FAM90A28P-201ENST00000596881 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
FAM90A28P-201ENST00000596881 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
FAM90A28P-201ENST00000596881 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
FAM90A28P-201ENST00000596881 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
FAM90A28P-201ENST00000596881 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
FAM90A28P-201ENST00000596881 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
FAM90A28P-201ENST00000596881 CCDC88BA6NC98 1476 aa23.65■■□□□ 1.38
FAM90A28P-201ENST00000596881 CFTRP13569 1480 aa23.3■■□□□ 1.32
FAM90A28P-201ENST00000596881 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
FAM90A28P-201ENST00000596881 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
FAM90A28P-201ENST00000596881 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
FAM90A28P-201ENST00000596881 NESP48681 1621 aa23.19■■□□□ 1.3
FAM90A28P-201ENST00000596881 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
FAM90A28P-201ENST00000596881 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
FAM90A28P-201ENST00000596881 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
FAM90A28P-201ENST00000596881 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
FAM90A28P-201ENST00000596881 KIF21AQ7Z4S6 1674 aa22.95■■□□□ 1.26
FAM90A28P-201ENST00000596881 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
FAM90A28P-201ENST00000596881 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
FAM90A28P-201ENST00000596881 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
FAM90A28P-201ENST00000596881 CUX1P39880 1505 aa22.84■■□□□ 1.25
FAM90A28P-201ENST00000596881 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
FAM90A28P-201ENST00000596881 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
FAM90A28P-201ENST00000596881 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
FAM90A28P-201ENST00000596881 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
FAM90A28P-201ENST00000596881 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
FAM90A28P-201ENST00000596881 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
FAM90A28P-201ENST00000596881 TOPBP1Q92547 1522 aa22.74■■□□□ 1.23
FAM90A28P-201ENST00000596881 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
FAM90A28P-201ENST00000596881 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
FAM90A28P-201ENST00000596881 WDR62O43379 1518 aa22.67■■□□□ 1.22
FAM90A28P-201ENST00000596881 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
FAM90A28P-201ENST00000596881 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
FAM90A28P-201ENST00000596881 CUX2O14529 1486 aa22.5■■□□□ 1.19
FAM90A28P-201ENST00000596881 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
FAM90A28P-201ENST00000596881 SOGA1O94964 1423 aa22.48■■□□□ 1.19
FAM90A28P-201ENST00000596881 TARBP1Q13395 1621 aaKnown RBP22.47■■□□□ 1.19
FAM90A28P-201ENST00000596881 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
FAM90A28P-201ENST00000596881 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
FAM90A28P-201ENST00000596881 RUSC2Q8N2Y8 1516 aa22.42■■□□□ 1.18
FAM90A28P-201ENST00000596881 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
FAM90A28P-201ENST00000596881 EEA1Q15075 1411 aa22.37■■□□□ 1.17
FAM90A28P-201ENST00000596881 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
FAM90A28P-201ENST00000596881 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
FAM90A28P-201ENST00000596881 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
FAM90A28P-201ENST00000596881 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
FAM90A28P-201ENST00000596881 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
FAM90A28P-201ENST00000596881 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
FAM90A28P-201ENST00000596881 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
FAM90A28P-201ENST00000596881 IGF1RP08069 1367 aa22.23■■□□□ 1.15
FAM90A28P-201ENST00000596881 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
FAM90A28P-201ENST00000596881 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
FAM90A28P-201ENST00000596881 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
FAM90A28P-201ENST00000596881 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
FAM90A28P-201ENST00000596881 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
FAM90A28P-201ENST00000596881 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
FAM90A28P-201ENST00000596881 KIF21BO75037 1637 aa22.13■■□□□ 1.13
FAM90A28P-201ENST00000596881 CUL7Q14999 1698 aa22.11■■□□□ 1.13
FAM90A28P-201ENST00000596881 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
FAM90A28P-201ENST00000596881 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
FAM90A28P-201ENST00000596881 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
FAM90A28P-201ENST00000596881 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
FAM90A28P-201ENST00000596881 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
FAM90A28P-201ENST00000596881 GOLGA3Q08378 1498 aa22.01■■□□□ 1.11
FAM90A28P-201ENST00000596881 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
FAM90A28P-201ENST00000596881 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
FAM90A28P-201ENST00000596881 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
FAM90A28P-201ENST00000596881 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
FAM90A28P-201ENST00000596881 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
FAM90A28P-201ENST00000596881 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
FAM90A28P-201ENST00000596881 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
FAM90A28P-201ENST00000596881 CHD1O14646 1710 aa21.83■■□□□ 1.08
FAM90A28P-201ENST00000596881 CTTNBP2Q8WZ74 1663 aa21.81■■□□□ 1.08
FAM90A28P-201ENST00000596881 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
FAM90A28P-201ENST00000596881 NUP160Q12769 1436 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms