RNA–Protein interactions for RNA: ENST00000634255.1

LINC01649-202, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5 BASIC

Gene LINC01649, Length 1,743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-202ENST00000634255 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
LINC01649-202ENST00000634255 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
LINC01649-202ENST00000634255 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
LINC01649-202ENST00000634255 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
LINC01649-202ENST00000634255 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
LINC01649-202ENST00000634255 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
LINC01649-202ENST00000634255 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
LINC01649-202ENST00000634255 ABCC9O60706 1549 aa23.66■■□□□ 1.38
LINC01649-202ENST00000634255 NACADO15069 1562 aa23.63■■□□□ 1.37
LINC01649-202ENST00000634255 SCRIBQ14160 1630 aa23.39■■□□□ 1.34
LINC01649-202ENST00000634255 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.34
LINC01649-202ENST00000634255 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
LINC01649-202ENST00000634255 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
LINC01649-202ENST00000634255 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
LINC01649-202ENST00000634255 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
LINC01649-202ENST00000634255 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
LINC01649-202ENST00000634255 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
LINC01649-202ENST00000634255 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
LINC01649-202ENST00000634255 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.21
LINC01649-202ENST00000634255 WIZO95785 1651 aa22.5■■□□□ 1.19
LINC01649-202ENST00000634255 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
LINC01649-202ENST00000634255 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
LINC01649-202ENST00000634255 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
LINC01649-202ENST00000634255 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
LINC01649-202ENST00000634255 SMARCA2P51531 1590 aa22.1■■□□□ 1.13
LINC01649-202ENST00000634255 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
LINC01649-202ENST00000634255 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
LINC01649-202ENST00000634255 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
LINC01649-202ENST00000634255 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
LINC01649-202ENST00000634255 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
LINC01649-202ENST00000634255 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
LINC01649-202ENST00000634255 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
LINC01649-202ENST00000634255 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
LINC01649-202ENST00000634255 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
LINC01649-202ENST00000634255 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
LINC01649-202ENST00000634255 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
LINC01649-202ENST00000634255 EEA1Q15075 1411 aa21.5■■□□□ 1.03
LINC01649-202ENST00000634255 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
LINC01649-202ENST00000634255 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
LINC01649-202ENST00000634255 CFTRP13569 1480 aa21.4■■□□□ 1.02
LINC01649-202ENST00000634255 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
LINC01649-202ENST00000634255 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
LINC01649-202ENST00000634255 SOGA1O94964 1423 aa21.35■■□□□ 1.01
LINC01649-202ENST00000634255 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
LINC01649-202ENST00000634255 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
LINC01649-202ENST00000634255 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
LINC01649-202ENST00000634255 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
LINC01649-202ENST00000634255 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
LINC01649-202ENST00000634255 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
LINC01649-202ENST00000634255 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
LINC01649-202ENST00000634255 KIF21BO75037 1637 aa21.17■□□□□ 0.98
LINC01649-202ENST00000634255 CUX1P39880 1505 aa21.17■□□□□ 0.98
LINC01649-202ENST00000634255 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
LINC01649-202ENST00000634255 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
LINC01649-202ENST00000634255 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
LINC01649-202ENST00000634255 CEP162Q5TB80 1403 aa21.07■□□□□ 0.96
LINC01649-202ENST00000634255 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
LINC01649-202ENST00000634255 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
LINC01649-202ENST00000634255 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
LINC01649-202ENST00000634255 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
LINC01649-202ENST00000634255 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
LINC01649-202ENST00000634255 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
LINC01649-202ENST00000634255 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
LINC01649-202ENST00000634255 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
LINC01649-202ENST00000634255 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.93
LINC01649-202ENST00000634255 NESP48681 1621 aa20.88■□□□□ 0.93
LINC01649-202ENST00000634255 HRCP23327 699 aa20.87■□□□□ 0.93
LINC01649-202ENST00000634255 CLIP1P30622 1438 aa20.83■□□□□ 0.92
LINC01649-202ENST00000634255 CUX2O14529 1486 aa20.82■□□□□ 0.92
LINC01649-202ENST00000634255 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
LINC01649-202ENST00000634255 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
LINC01649-202ENST00000634255 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
LINC01649-202ENST00000634255 IGF1RP08069 1367 aa20.74■□□□□ 0.91
LINC01649-202ENST00000634255 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
LINC01649-202ENST00000634255 VPS8Q8N3P4 1428 aa20.71■□□□□ 0.91
LINC01649-202ENST00000634255 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
LINC01649-202ENST00000634255 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
LINC01649-202ENST00000634255 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
LINC01649-202ENST00000634255 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
LINC01649-202ENST00000634255 WDR97A6NE52 1622 aa20.65■□□□□ 0.9
LINC01649-202ENST00000634255 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
LINC01649-202ENST00000634255 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
LINC01649-202ENST00000634255 CUL7Q14999 1698 aa20.61■□□□□ 0.89
LINC01649-202ENST00000634255 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
LINC01649-202ENST00000634255 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
LINC01649-202ENST00000634255 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
LINC01649-202ENST00000634255 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
LINC01649-202ENST00000634255 APLP2Q06481 763 aa20.53■□□□□ 0.88
LINC01649-202ENST00000634255 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.87
LINC01649-202ENST00000634255 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
LINC01649-202ENST00000634255 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
LINC01649-202ENST00000634255 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
LINC01649-202ENST00000634255 GAPVD1Q14C86 1478 aa20.47■□□□□ 0.87
LINC01649-202ENST00000634255 CTTNBP2Q8WZ74 1663 aa20.42■□□□□ 0.86
LINC01649-202ENST00000634255 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
LINC01649-202ENST00000634255 WDR62O43379 1518 aa20.4■□□□□ 0.86
LINC01649-202ENST00000634255 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
LINC01649-202ENST00000634255 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
LINC01649-202ENST00000634255 MAP3K1Q13233 1512 aa20.34■□□□□ 0.85
LINC01649-202ENST00000634255 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms