RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
CSTF2-203ENST00000415585 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
CSTF2-203ENST00000415585 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
CSTF2-203ENST00000415585 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
CSTF2-203ENST00000415585 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
CSTF2-203ENST00000415585 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
CSTF2-203ENST00000415585 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
CSTF2-203ENST00000415585 ABCC9O60706 1549 aa22.77■■□□□ 1.24
CSTF2-203ENST00000415585 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
CSTF2-203ENST00000415585 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
CSTF2-203ENST00000415585 NACADO15069 1562 aa22.29■■□□□ 1.16
CSTF2-203ENST00000415585 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
CSTF2-203ENST00000415585 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
CSTF2-203ENST00000415585 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
CSTF2-203ENST00000415585 HRCP23327 699 aa21.8■■□□□ 1.08
CSTF2-203ENST00000415585 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
CSTF2-203ENST00000415585 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
CSTF2-203ENST00000415585 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
CSTF2-203ENST00000415585 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
CSTF2-203ENST00000415585 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
CSTF2-203ENST00000415585 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
CSTF2-203ENST00000415585 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
CSTF2-203ENST00000415585 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
CSTF2-203ENST00000415585 WIZO95785 1651 aa21.47■■□□□ 1.03
CSTF2-203ENST00000415585 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.01
CSTF2-203ENST00000415585 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
CSTF2-203ENST00000415585 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
CSTF2-203ENST00000415585 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
CSTF2-203ENST00000415585 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
CSTF2-203ENST00000415585 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
CSTF2-203ENST00000415585 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
CSTF2-203ENST00000415585 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
CSTF2-203ENST00000415585 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
CSTF2-203ENST00000415585 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
CSTF2-203ENST00000415585 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
CSTF2-203ENST00000415585 ZEB1P37275 1124 aaPredicted RBP20.93■□□□□ 0.94
CSTF2-203ENST00000415585 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
CSTF2-203ENST00000415585 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
CSTF2-203ENST00000415585 SOGA1O94964 1423 aa20.74■□□□□ 0.91
CSTF2-203ENST00000415585 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
CSTF2-203ENST00000415585 EEA1Q15075 1411 aa20.69■□□□□ 0.9
CSTF2-203ENST00000415585 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
CSTF2-203ENST00000415585 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
CSTF2-203ENST00000415585 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.9
CSTF2-203ENST00000415585 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
CSTF2-203ENST00000415585 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
CSTF2-203ENST00000415585 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
CSTF2-203ENST00000415585 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
CSTF2-203ENST00000415585 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
CSTF2-203ENST00000415585 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
CSTF2-203ENST00000415585 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
CSTF2-203ENST00000415585 UBTFP17480 764 aaKnown RBP20.5■□□□□ 0.87
CSTF2-203ENST00000415585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
CSTF2-203ENST00000415585 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
CSTF2-203ENST00000415585 KIF21BO75037 1637 aa20.44■□□□□ 0.86
CSTF2-203ENST00000415585 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
CSTF2-203ENST00000415585 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
CSTF2-203ENST00000415585 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
CSTF2-203ENST00000415585 CLIP1P30622 1438 aa20.27■□□□□ 0.84
CSTF2-203ENST00000415585 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
CSTF2-203ENST00000415585 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
CSTF2-203ENST00000415585 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
CSTF2-203ENST00000415585 CFTRP13569 1480 aa20.22■□□□□ 0.83
CSTF2-203ENST00000415585 VPS8Q8N3P4 1428 aa20.2■□□□□ 0.82
CSTF2-203ENST00000415585 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
CSTF2-203ENST00000415585 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
CSTF2-203ENST00000415585 CUX1P39880 1505 aa20.09■□□□□ 0.81
CSTF2-203ENST00000415585 PRXQ9BXM0 1461 aa20.08■□□□□ 0.81
CSTF2-203ENST00000415585 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
CSTF2-203ENST00000415585 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
CSTF2-203ENST00000415585 APLP2Q06481 763 aa20.05■□□□□ 0.8
CSTF2-203ENST00000415585 NESP48681 1621 aa20.05■□□□□ 0.8
CSTF2-203ENST00000415585 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
CSTF2-203ENST00000415585 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
CSTF2-203ENST00000415585 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
CSTF2-203ENST00000415585 ARAP1Q96P48 1450 aa19.98■□□□□ 0.79
CSTF2-203ENST00000415585 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
CSTF2-203ENST00000415585 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
CSTF2-203ENST00000415585 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
CSTF2-203ENST00000415585 ACIN1Q9UKV3 1341 aaKnown RBP19.9■□□□□ 0.78
CSTF2-203ENST00000415585 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
CSTF2-203ENST00000415585 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
CSTF2-203ENST00000415585 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
CSTF2-203ENST00000415585 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
CSTF2-203ENST00000415585 CENPBP07199 599 aaPredicted RBP19.79■□□□□ 0.76
CSTF2-203ENST00000415585 CUX2O14529 1486 aa19.77■□□□□ 0.76
CSTF2-203ENST00000415585 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
CSTF2-203ENST00000415585 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
CSTF2-203ENST00000415585 IGF1RP08069 1367 aa19.74■□□□□ 0.75
CSTF2-203ENST00000415585 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
CSTF2-203ENST00000415585 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
CSTF2-203ENST00000415585 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
CSTF2-203ENST00000415585 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
CSTF2-203ENST00000415585 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
CSTF2-203ENST00000415585 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
CSTF2-203ENST00000415585 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
CSTF2-203ENST00000415585 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
CSTF2-203ENST00000415585 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
CSTF2-203ENST00000415585 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.74
CSTF2-203ENST00000415585 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms