RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
MUC1-223ENST00000611571 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
MUC1-223ENST00000611571 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
MUC1-223ENST00000611571 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
MUC1-223ENST00000611571 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.26
MUC1-223ENST00000611571 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
MUC1-223ENST00000611571 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
MUC1-223ENST00000611571 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
MUC1-223ENST00000611571 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
MUC1-223ENST00000611571 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
MUC1-223ENST00000611571 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
MUC1-223ENST00000611571 HRCP23327 699 aa21.58■■□□□ 1.05
MUC1-223ENST00000611571 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
MUC1-223ENST00000611571 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
MUC1-223ENST00000611571 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
MUC1-223ENST00000611571 APLP2Q06481 763 aa21.38■■□□□ 1.01
MUC1-223ENST00000611571 TRIM26Q12899 539 aaPredicted RBP21.28■■□□□ 1
MUC1-223ENST00000611571 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
MUC1-223ENST00000611571 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
MUC1-223ENST00000611571 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
MUC1-223ENST00000611571 CENPBP07199 599 aaPredicted RBP21.14■□□□□ 0.98
MUC1-223ENST00000611571 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
MUC1-223ENST00000611571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
MUC1-223ENST00000611571 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
MUC1-223ENST00000611571 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
MUC1-223ENST00000611571 ITGAEP38570 1179 aa20.72■□□□□ 0.91
MUC1-223ENST00000611571 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
MUC1-223ENST00000611571 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
MUC1-223ENST00000611571 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
MUC1-223ENST00000611571 NEFLP07196 543 aa20.35■□□□□ 0.85
MUC1-223ENST00000611571 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
MUC1-223ENST00000611571 MYO15BQ96JP2 1530 aa20.34■□□□□ 0.85
MUC1-223ENST00000611571 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
MUC1-223ENST00000611571 ABCC9O60706 1549 aa20.23■□□□□ 0.83
MUC1-223ENST00000611571 POLR3GLQ9BT43 218 aa20.15■□□□□ 0.82
MUC1-223ENST00000611571 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.81
MUC1-223ENST00000611571 BCANQ96GW7 911 aa20.14■□□□□ 0.81
MUC1-223ENST00000611571 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
MUC1-223ENST00000611571 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
MUC1-223ENST00000611571 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
MUC1-223ENST00000611571 MYT1Q01538 1121 aa20.02■□□□□ 0.8
MUC1-223ENST00000611571 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
MUC1-223ENST00000611571 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
MUC1-223ENST00000611571 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
MUC1-223ENST00000611571 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
MUC1-223ENST00000611571 P3H3Q8IVL6 736 aa19.83■□□□□ 0.76
MUC1-223ENST00000611571 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
MUC1-223ENST00000611571 MIER1Q8N108 512 aa19.73■□□□□ 0.75
MUC1-223ENST00000611571 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
MUC1-223ENST00000611571 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
MUC1-223ENST00000611571 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
MUC1-223ENST00000611571 ANP32CO43423 234 aa19.6■□□□□ 0.73
MUC1-223ENST00000611571 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
MUC1-223ENST00000611571 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
MUC1-223ENST00000611571 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
MUC1-223ENST00000611571 FKBP8Q14318 412 aa19.54■□□□□ 0.72
MUC1-223ENST00000611571 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
MUC1-223ENST00000611571 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
MUC1-223ENST00000611571 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
MUC1-223ENST00000611571 IRX6P78412 446 aaPredicted RBP19.35■□□□□ 0.69
MUC1-223ENST00000611571 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
MUC1-223ENST00000611571 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
MUC1-223ENST00000611571 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
MUC1-223ENST00000611571 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
MUC1-223ENST00000611571 FBLN2P98095 1184 aa19.29■□□□□ 0.68
MUC1-223ENST00000611571 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
MUC1-223ENST00000611571 CHIC2Q9UKJ5 165 aa19.29■□□□□ 0.68
MUC1-223ENST00000611571 FAM9BQ8IZU0 186 aa19.28■□□□□ 0.68
MUC1-223ENST00000611571 CLIP1P30622 1438 aa19.27■□□□□ 0.68
MUC1-223ENST00000611571 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
MUC1-223ENST00000611571 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
MUC1-223ENST00000611571 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
MUC1-223ENST00000611571 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
MUC1-223ENST00000611571 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
MUC1-223ENST00000611571 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
MUC1-223ENST00000611571 NPM2Q86SE8 214 aaKnown RBP19.18■□□□□ 0.66
MUC1-223ENST00000611571 SOGA1O94964 1423 aa19.14■□□□□ 0.65
MUC1-223ENST00000611571 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
MUC1-223ENST00000611571 BCL11AQ9H165 835 aa19.08■□□□□ 0.65
MUC1-223ENST00000611571 RB1CC1Q8TDY2 1594 aa19.07■□□□□ 0.64
MUC1-223ENST00000611571 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
MUC1-223ENST00000611571 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
MUC1-223ENST00000611571 NBR1Q14596 966 aa19.03■□□□□ 0.64
MUC1-223ENST00000611571 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.63
MUC1-223ENST00000611571 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
MUC1-223ENST00000611571 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
MUC1-223ENST00000611571 SUPT16HQ9Y5B9 1047 aaKnown RBP19.01■□□□□ 0.63
MUC1-223ENST00000611571 ANP32AP39687 249 aaKnown RBP18.95■□□□□ 0.62
MUC1-223ENST00000611571 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
MUC1-223ENST00000611571 KANK4Q5T7N3 995 aaPredicted RBP18.94■□□□□ 0.62
MUC1-223ENST00000611571 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
MUC1-223ENST00000611571 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
MUC1-223ENST00000611571 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
MUC1-223ENST00000611571 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
MUC1-223ENST00000611571 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
MUC1-223ENST00000611571 TMC1Q8TDI8 760 aa18.88■□□□□ 0.61
MUC1-223ENST00000611571 EEA1Q15075 1411 aa18.86■□□□□ 0.61
MUC1-223ENST00000611571 KCNH8Q96L42 1107 aa18.84■□□□□ 0.61
MUC1-223ENST00000611571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
MUC1-223ENST00000611571 CANXP27824 592 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms