RNA–Protein interactions for RNA: ENST00000560818.1

AC016044.1-201, humanhuman

TSL 4 BASIC

Gene AC016044.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016044.1-201ENST00000560818 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
AC016044.1-201ENST00000560818 ABCC9O60706 1549 aa32.2■■■□□ 2.74
AC016044.1-201ENST00000560818 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
AC016044.1-201ENST00000560818 RB1CC1Q8TDY2 1594 aa30.61■■■□□ 2.49
AC016044.1-201ENST00000560818 NACADO15069 1562 aa30.4■■■□□ 2.46
AC016044.1-201ENST00000560818 DNAJC5BQ9UF47 199 aa30.32■■■□□ 2.44
AC016044.1-201ENST00000560818 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
AC016044.1-201ENST00000560818 MYO15BQ96JP2 1530 aa30■■■□□ 2.39
AC016044.1-201ENST00000560818 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
AC016044.1-201ENST00000560818 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
AC016044.1-201ENST00000560818 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
AC016044.1-201ENST00000560818 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
AC016044.1-201ENST00000560818 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
AC016044.1-201ENST00000560818 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
AC016044.1-201ENST00000560818 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
AC016044.1-201ENST00000560818 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
AC016044.1-201ENST00000560818 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
AC016044.1-201ENST00000560818 EIF4G1Q04637 1599 aaKnown RBP29■■■□□ 2.23
AC016044.1-201ENST00000560818 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
AC016044.1-201ENST00000560818 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
AC016044.1-201ENST00000560818 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
AC016044.1-201ENST00000560818 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
AC016044.1-201ENST00000560818 SMARCA2P51531 1590 aa27.89■■■□□ 2.05
AC016044.1-201ENST00000560818 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
AC016044.1-201ENST00000560818 CUX2O14529 1486 aa27.8■■■□□ 2.04
AC016044.1-201ENST00000560818 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
AC016044.1-201ENST00000560818 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
AC016044.1-201ENST00000560818 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
AC016044.1-201ENST00000560818 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
AC016044.1-201ENST00000560818 NESP48681 1621 aa27.63■■■□□ 2.01
AC016044.1-201ENST00000560818 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
AC016044.1-201ENST00000560818 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
AC016044.1-201ENST00000560818 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
AC016044.1-201ENST00000560818 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
AC016044.1-201ENST00000560818 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
AC016044.1-201ENST00000560818 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
AC016044.1-201ENST00000560818 WIZO95785 1651 aa27.17■■□□□ 1.94
AC016044.1-201ENST00000560818 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
AC016044.1-201ENST00000560818 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
AC016044.1-201ENST00000560818 WDR62O43379 1518 aa26.99■■□□□ 1.91
AC016044.1-201ENST00000560818 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
AC016044.1-201ENST00000560818 CFTRP13569 1480 aa26.92■■□□□ 1.9
AC016044.1-201ENST00000560818 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
AC016044.1-201ENST00000560818 TOP2AP11388 1531 aaKnown RBP26.87■■□□□ 1.89
AC016044.1-201ENST00000560818 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
AC016044.1-201ENST00000560818 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
AC016044.1-201ENST00000560818 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
AC016044.1-201ENST00000560818 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
AC016044.1-201ENST00000560818 PRDM2Q13029 1718 aa26.48■■□□□ 1.83
AC016044.1-201ENST00000560818 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
AC016044.1-201ENST00000560818 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
AC016044.1-201ENST00000560818 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
AC016044.1-201ENST00000560818 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
AC016044.1-201ENST00000560818 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
AC016044.1-201ENST00000560818 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
AC016044.1-201ENST00000560818 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
AC016044.1-201ENST00000560818 AQRO60306 1485 aaKnown RBP eCLIP26.13■■□□□ 1.77
AC016044.1-201ENST00000560818 RIMBP3CA6NJZ7 1639 aa26.13■■□□□ 1.77
AC016044.1-201ENST00000560818 RIMBP3BA6NNM3 1639 aa26.13■■□□□ 1.77
AC016044.1-201ENST00000560818 RIMBP3Q9UFD9 1639 aa26.13■■□□□ 1.77
AC016044.1-201ENST00000560818 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
AC016044.1-201ENST00000560818 ARHGEF11O15085 1522 aa26.08■■□□□ 1.77
AC016044.1-201ENST00000560818 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
AC016044.1-201ENST00000560818 SOGA1O94964 1423 aa26.01■■□□□ 1.75
AC016044.1-201ENST00000560818 FBLN2P98095 1184 aa25.97■■□□□ 1.75
AC016044.1-201ENST00000560818 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
AC016044.1-201ENST00000560818 CHD1O14646 1710 aa25.94■■□□□ 1.74
AC016044.1-201ENST00000560818 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
AC016044.1-201ENST00000560818 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
AC016044.1-201ENST00000560818 CUX1P39880 1505 aa25.89■■□□□ 1.74
AC016044.1-201ENST00000560818 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
AC016044.1-201ENST00000560818 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
AC016044.1-201ENST00000560818 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
AC016044.1-201ENST00000560818 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
AC016044.1-201ENST00000560818 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
AC016044.1-201ENST00000560818 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
AC016044.1-201ENST00000560818 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
AC016044.1-201ENST00000560818 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
AC016044.1-201ENST00000560818 SYNJ2O15056 1496 aa25.71■■□□□ 1.71
AC016044.1-201ENST00000560818 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
AC016044.1-201ENST00000560818 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
AC016044.1-201ENST00000560818 ABCA10Q8WWZ4 1543 aa25.65■■□□□ 1.7
AC016044.1-201ENST00000560818 TRHP20396 242 aaPredicted RBP25.64■■□□□ 1.7
AC016044.1-201ENST00000560818 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
AC016044.1-201ENST00000560818 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
AC016044.1-201ENST00000560818 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
AC016044.1-201ENST00000560818 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
AC016044.1-201ENST00000560818 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
AC016044.1-201ENST00000560818 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
AC016044.1-201ENST00000560818 ADAMTS12P58397 1594 aa25.39■■□□□ 1.66
AC016044.1-201ENST00000560818 NUP160Q12769 1436 aa25.38■■□□□ 1.65
AC016044.1-201ENST00000560818 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
AC016044.1-201ENST00000560818 CEP170Q5SW79 1584 aa25.34■■□□□ 1.65
AC016044.1-201ENST00000560818 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
AC016044.1-201ENST00000560818 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
AC016044.1-201ENST00000560818 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
AC016044.1-201ENST00000560818 JPH4Q96JJ6 628 aa25.14■■□□□ 1.62
AC016044.1-201ENST00000560818 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
AC016044.1-201ENST00000560818 RUSC2Q8N2Y8 1516 aa25.03■■□□□ 1.6
AC016044.1-201ENST00000560818 IGF1RP08069 1367 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms