RNA–Protein interactions for RNA: ENST00000568793.5

HACD3-210, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-210ENST00000568793 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
HACD3-210ENST00000568793 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
HACD3-210ENST00000568793 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.64
HACD3-210ENST00000568793 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
HACD3-210ENST00000568793 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
HACD3-210ENST00000568793 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
HACD3-210ENST00000568793 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
HACD3-210ENST00000568793 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
HACD3-210ENST00000568793 ABCC9O60706 1549 aa24.32■■□□□ 1.48
HACD3-210ENST00000568793 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
HACD3-210ENST00000568793 NACADO15069 1562 aa24.12■■□□□ 1.45
HACD3-210ENST00000568793 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
HACD3-210ENST00000568793 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
HACD3-210ENST00000568793 SUPT5HO00267 1087 aaKnown RBP23.57■■□□□ 1.36
HACD3-210ENST00000568793 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
HACD3-210ENST00000568793 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
HACD3-210ENST00000568793 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
HACD3-210ENST00000568793 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
HACD3-210ENST00000568793 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
HACD3-210ENST00000568793 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
HACD3-210ENST00000568793 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
HACD3-210ENST00000568793 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
HACD3-210ENST00000568793 WIZO95785 1651 aa22.87■■□□□ 1.25
HACD3-210ENST00000568793 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
HACD3-210ENST00000568793 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
HACD3-210ENST00000568793 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
HACD3-210ENST00000568793 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
HACD3-210ENST00000568793 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
HACD3-210ENST00000568793 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
HACD3-210ENST00000568793 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.17
HACD3-210ENST00000568793 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
HACD3-210ENST00000568793 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
HACD3-210ENST00000568793 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
HACD3-210ENST00000568793 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
HACD3-210ENST00000568793 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
HACD3-210ENST00000568793 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
HACD3-210ENST00000568793 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
HACD3-210ENST00000568793 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
HACD3-210ENST00000568793 CFTRP13569 1480 aa21.78■■□□□ 1.08
HACD3-210ENST00000568793 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
HACD3-210ENST00000568793 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
HACD3-210ENST00000568793 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
HACD3-210ENST00000568793 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
HACD3-210ENST00000568793 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
HACD3-210ENST00000568793 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
HACD3-210ENST00000568793 EEA1Q15075 1411 aa21.64■■□□□ 1.05
HACD3-210ENST00000568793 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
HACD3-210ENST00000568793 SOGA1O94964 1423 aa21.58■■□□□ 1.05
HACD3-210ENST00000568793 CUX1P39880 1505 aa21.52■■□□□ 1.04
HACD3-210ENST00000568793 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
HACD3-210ENST00000568793 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
HACD3-210ENST00000568793 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
HACD3-210ENST00000568793 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.03
HACD3-210ENST00000568793 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
HACD3-210ENST00000568793 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
HACD3-210ENST00000568793 NESP48681 1621 aa21.4■■□□□ 1.02
HACD3-210ENST00000568793 KIF21BO75037 1637 aa21.36■■□□□ 1.01
HACD3-210ENST00000568793 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
HACD3-210ENST00000568793 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
HACD3-210ENST00000568793 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
HACD3-210ENST00000568793 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
HACD3-210ENST00000568793 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
HACD3-210ENST00000568793 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
HACD3-210ENST00000568793 KIF27Q86VH2 1401 aa21.27■□□□□ 0.99
HACD3-210ENST00000568793 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
HACD3-210ENST00000568793 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
HACD3-210ENST00000568793 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
HACD3-210ENST00000568793 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
HACD3-210ENST00000568793 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
HACD3-210ENST00000568793 CUX2O14529 1486 aa21.16■□□□□ 0.98
HACD3-210ENST00000568793 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
HACD3-210ENST00000568793 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
HACD3-210ENST00000568793 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
HACD3-210ENST00000568793 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.97
HACD3-210ENST00000568793 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
HACD3-210ENST00000568793 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
HACD3-210ENST00000568793 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
HACD3-210ENST00000568793 IGF1RP08069 1367 aa21.02■□□□□ 0.96
HACD3-210ENST00000568793 MRC2Q9UBG0 1479 aa21■□□□□ 0.95
HACD3-210ENST00000568793 PCGF6Q9BYE7 350 aa20.99■□□□□ 0.95
HACD3-210ENST00000568793 CLIP1P30622 1438 aa20.98■□□□□ 0.95
HACD3-210ENST00000568793 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
HACD3-210ENST00000568793 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
HACD3-210ENST00000568793 CUL7Q14999 1698 aa20.93■□□□□ 0.94
HACD3-210ENST00000568793 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
HACD3-210ENST00000568793 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
HACD3-210ENST00000568793 WDR62O43379 1518 aa20.89■□□□□ 0.94
HACD3-210ENST00000568793 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
HACD3-210ENST00000568793 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
HACD3-210ENST00000568793 VPS8Q8N3P4 1428 aa20.83■□□□□ 0.93
HACD3-210ENST00000568793 TDRD9Q8NDG6 1382 aaKnown RBP20.81■□□□□ 0.92
HACD3-210ENST00000568793 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
HACD3-210ENST00000568793 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
HACD3-210ENST00000568793 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
HACD3-210ENST00000568793 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
HACD3-210ENST00000568793 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
HACD3-210ENST00000568793 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
HACD3-210ENST00000568793 PPARGC1BQ86YN6 1023 aaKnown RBP20.74■□□□□ 0.91
HACD3-210ENST00000568793 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
HACD3-210ENST00000568793 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■■■■□ 23.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms