RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
TROAP-213ENST00000550709 CCDC180Q9P1Z9 1646 aa29.13■■■□□ 2.25
TROAP-213ENST00000550709 ABCC9O60706 1549 aa28.72■■■□□ 2.19
TROAP-213ENST00000550709 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
TROAP-213ENST00000550709 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
TROAP-213ENST00000550709 NACADO15069 1562 aa27.49■■□□□ 1.99
TROAP-213ENST00000550709 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
TROAP-213ENST00000550709 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
TROAP-213ENST00000550709 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
TROAP-213ENST00000550709 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
TROAP-213ENST00000550709 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
TROAP-213ENST00000550709 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
TROAP-213ENST00000550709 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
TROAP-213ENST00000550709 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
TROAP-213ENST00000550709 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
TROAP-213ENST00000550709 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
TROAP-213ENST00000550709 CC2D2AQ9P2K1 1620 aa25.86■■□□□ 1.73
TROAP-213ENST00000550709 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
TROAP-213ENST00000550709 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
TROAP-213ENST00000550709 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
TROAP-213ENST00000550709 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
TROAP-213ENST00000550709 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
TROAP-213ENST00000550709 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
TROAP-213ENST00000550709 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
TROAP-213ENST00000550709 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
TROAP-213ENST00000550709 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
TROAP-213ENST00000550709 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
TROAP-213ENST00000550709 HMGXB3Q12766 1538 aa25.23■■□□□ 1.63
TROAP-213ENST00000550709 WIZO95785 1651 aa25.14■■□□□ 1.62
TROAP-213ENST00000550709 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
TROAP-213ENST00000550709 NESP48681 1621 aa24.85■■□□□ 1.57
TROAP-213ENST00000550709 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
TROAP-213ENST00000550709 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
TROAP-213ENST00000550709 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
TROAP-213ENST00000550709 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
TROAP-213ENST00000550709 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
TROAP-213ENST00000550709 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
TROAP-213ENST00000550709 CFTRP13569 1480 aa24.56■■□□□ 1.52
TROAP-213ENST00000550709 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
TROAP-213ENST00000550709 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
TROAP-213ENST00000550709 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
TROAP-213ENST00000550709 CUX2O14529 1486 aa24.35■■□□□ 1.49
TROAP-213ENST00000550709 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
TROAP-213ENST00000550709 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
TROAP-213ENST00000550709 WDR62O43379 1518 aa24.18■■□□□ 1.46
TROAP-213ENST00000550709 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
TROAP-213ENST00000550709 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
TROAP-213ENST00000550709 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
TROAP-213ENST00000550709 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
TROAP-213ENST00000550709 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
TROAP-213ENST00000550709 CUX1P39880 1505 aa23.89■■□□□ 1.41
TROAP-213ENST00000550709 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
TROAP-213ENST00000550709 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
TROAP-213ENST00000550709 SOGA1O94964 1423 aa23.81■■□□□ 1.4
TROAP-213ENST00000550709 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
TROAP-213ENST00000550709 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
TROAP-213ENST00000550709 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
TROAP-213ENST00000550709 WRNQ14191 1432 aaPredicted RBP eCLIP23.8■■□□□ 1.4
TROAP-213ENST00000550709 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
TROAP-213ENST00000550709 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.394e-8■■■■□ 24.6
TROAP-213ENST00000550709 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
TROAP-213ENST00000550709 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
TROAP-213ENST00000550709 DNAJC5Q9H3Z4 198 aa23.65■■□□□ 1.38
TROAP-213ENST00000550709 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
TROAP-213ENST00000550709 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
TROAP-213ENST00000550709 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
TROAP-213ENST00000550709 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
TROAP-213ENST00000550709 FBLN2P98095 1184 aa23.53■■□□□ 1.36
TROAP-213ENST00000550709 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
TROAP-213ENST00000550709 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
TROAP-213ENST00000550709 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
TROAP-213ENST00000550709 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
TROAP-213ENST00000550709 WDR97A6NE52 1622 aa23.43■■□□□ 1.34
TROAP-213ENST00000550709 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
TROAP-213ENST00000550709 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
TROAP-213ENST00000550709 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
TROAP-213ENST00000550709 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
TROAP-213ENST00000550709 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
TROAP-213ENST00000550709 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
TROAP-213ENST00000550709 PBRM1Q86U86 1689 aa23.27■■□□□ 1.32
TROAP-213ENST00000550709 IGF1RP08069 1367 aa23.24■■□□□ 1.31
TROAP-213ENST00000550709 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
TROAP-213ENST00000550709 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
TROAP-213ENST00000550709 CHD1O14646 1710 aa23.22■■□□□ 1.31
TROAP-213ENST00000550709 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
TROAP-213ENST00000550709 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
TROAP-213ENST00000550709 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
TROAP-213ENST00000550709 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
TROAP-213ENST00000550709 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
TROAP-213ENST00000550709 NUP160Q12769 1436 aa23.05■■□□□ 1.28
TROAP-213ENST00000550709 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
TROAP-213ENST00000550709 ARHGEF11O15085 1522 aa23.02■■□□□ 1.28
TROAP-213ENST00000550709 CEP170Q5SW79 1584 aa23■■□□□ 1.27
TROAP-213ENST00000550709 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
TROAP-213ENST00000550709 CUL7Q14999 1698 aa22.98■■□□□ 1.27
TROAP-213ENST00000550709 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
TROAP-213ENST00000550709 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
TROAP-213ENST00000550709 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
TROAP-213ENST00000550709 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
TROAP-213ENST00000550709 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms