Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAB11FIP4Q86YS3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.31■■□□□ 1.8
RAB11FIP4Q86YS3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAB11FIP4Q86YS3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
RAB11FIP4Q86YS3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 DUSP8P5-201ENST00000422884 1815 ntBASIC26.29■■□□□ 1.8
RAB11FIP4Q86YS3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 AL512631.2-201ENST00000604634 923 ntBASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RAB11FIP4Q86YS3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 AC131281.2-201ENST00000520478 145 ntBASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 MIR4466-201ENST00000606121 54 ntBASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAB11FIP4Q86YS3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 AC092068.2-201ENST00000590491 1708 ntBASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.26■■□□□ 1.79
RAB11FIP4Q86YS3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RAB11FIP4Q86YS3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAB11FIP4Q86YS3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.25■■□□□ 1.79
RAB11FIP4Q86YS3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.25■■□□□ 1.79
RAB11FIP4Q86YS3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.25■■□□□ 1.79
RAB11FIP4Q86YS3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAB11FIP4Q86YS3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 AL353803.4-201ENST00000565882 1934 ntBASIC26.24■■□□□ 1.79
RAB11FIP4Q86YS3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.23■■□□□ 1.79
RAB11FIP4Q86YS3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 C17orf82-201ENST00000623772 1530 ntBASIC26.22■■□□□ 1.79
RAB11FIP4Q86YS3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAB11FIP4Q86YS3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RAB11FIP4Q86YS3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RAB11FIP4Q86YS3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RAB11FIP4Q86YS3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.2■■□□□ 1.78
RAB11FIP4Q86YS3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RAB11FIP4Q86YS3 AC144652.1-201ENST00000609974 1624 ntBASIC26.2■■□□□ 1.78
RAB11FIP4Q86YS3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.2■■□□□ 1.78
RAB11FIP4Q86YS3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
RAB11FIP4Q86YS3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RAB11FIP4Q86YS3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RAB11FIP4Q86YS3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RAB11FIP4Q86YS3 DUSP8P3-201ENST00000399571 1760 ntBASIC26.18■■□□□ 1.78
RAB11FIP4Q86YS3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms