RNA–Protein interactions for RNA: ENST00000246104.6

SCRT2-201, Transcript of scratch family transcriptional repressor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT2, Length 3,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2-201ENST00000246104 NISCHQ9Y2I1 1504 aa41.86■■■■■ 4.29
SCRT2-201ENST00000246104 SHROOM4Q9ULL8 1493 aa38.68■■■■□ 3.78
SCRT2-201ENST00000246104 SUPT5HO00267 1087 aaKnown RBP38.35■■■■□ 3.73
SCRT2-201ENST00000246104 DCAF8L2P0C7V8 631 aa37.47■■■■□ 3.59
SCRT2-201ENST00000246104 PCGF6Q9BYE7 350 aa37.17■■■■□ 3.54
SCRT2-201ENST00000246104 PPARGC1BQ86YN6 1023 aaKnown RBP37.04■■■■□ 3.52
SCRT2-201ENST00000246104 HRCP23327 699 aa36.75■■■■□ 3.47
SCRT2-201ENST00000246104 CHIC1Q5VXU3 224 aa36.56■■■■□ 3.44
SCRT2-201ENST00000246104 MYO15BQ96JP2 1530 aa36.5■■■■□ 3.43
SCRT2-201ENST00000246104 LOC105371045A0A1W2PR82 267 aa36.42■■■■□ 3.42
SCRT2-201ENST00000246104 EHMT2Q96KQ7 1210 aa36.39■■■■□ 3.42
SCRT2-201ENST00000246104 FAM9AQ8IZU1 332 aaPredicted RBP35.82■■■■□ 3.32
SCRT2-201ENST00000246104 ZCCHC6Q5VYS8 1495 aaKnown RBP35.33■■■■□ 3.25
SCRT2-201ENST00000246104 TRIM26Q12899 539 aaPredicted RBP35.27■■■■□ 3.24
SCRT2-201ENST00000246104 TTBK1Q5TCY1 1321 aaPredicted RBP35.23■■■■□ 3.23
SCRT2-201ENST00000246104 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
SCRT2-201ENST00000246104 SCAF1Q9H7N4 1312 aaKnown RBP34.79■■■■□ 3.16
SCRT2-201ENST00000246104 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.16
SCRT2-201ENST00000246104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.69■■■■□ 3.14
SCRT2-201ENST00000246104 CCER1Q8TC90 406 aaPredicted RBP34.46■■■■□ 3.11
SCRT2-201ENST00000246104 ZEB1P37275 1124 aaPredicted RBP34.43■■■■□ 3.1
SCRT2-201ENST00000246104 YTHDC1Q96MU7 727 aaKnown RBP34.25■■■■□ 3.07
SCRT2-201ENST00000246104 NEUROD1Q13562 356 aa34.18■■■■□ 3.06
SCRT2-201ENST00000246104 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
SCRT2-201ENST00000246104 GTF3C3Q9Y5Q9 886 aa34.06■■■■□ 3.04
SCRT2-201ENST00000246104 PELP1Q8IZL8 1130 aaKnown RBP34.02■■■■□ 3.04
SCRT2-201ENST00000246104 DIEXFQ68CQ4 756 aaKnown RBP33.92■■■■□ 3.02
SCRT2-201ENST00000246104 ACIN1Q9UKV3 1341 aaKnown RBP33.9■■■■□ 3.02
SCRT2-201ENST00000246104 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
SCRT2-201ENST00000246104 RANGAP1P46060 587 aaPredicted RBP33.88■■■■□ 3.01
SCRT2-201ENST00000246104 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
SCRT2-201ENST00000246104 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
SCRT2-201ENST00000246104 CENPBP07199 599 aaPredicted RBP33.65■■■□□ 2.98
SCRT2-201ENST00000246104 UBTFP17480 764 aaKnown RBP33.58■■■□□ 2.97
SCRT2-201ENST00000246104 HNRNPUL2Q1KMD3 747 aaKnown RBP33.58■■■□□ 2.97
SCRT2-201ENST00000246104 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
SCRT2-201ENST00000246104 ABCC9O60706 1549 aa33.41■■■□□ 2.94
SCRT2-201ENST00000246104 MIER1Q8N108 512 aa33.2■■■□□ 2.91
SCRT2-201ENST00000246104 ZNF316A6NFI3 1004 aaPredicted RBP33.13■■■□□ 2.89
SCRT2-201ENST00000246104 MROH2BQ7Z745 1585 aa33.06■■■□□ 2.88
SCRT2-201ENST00000246104 ABCC8Q09428 1581 aa32.93■■■□□ 2.86
SCRT2-201ENST00000246104 WIZO95785 1651 aa32.9■■■□□ 2.86
SCRT2-201ENST00000246104 SOGA1O94964 1423 aa32.89■■■□□ 2.86
SCRT2-201ENST00000246104 CEP162Q5TB80 1403 aa32.85■■■□□ 2.85
SCRT2-201ENST00000246104 CCDC88BA6NC98 1476 aa32.84■■■□□ 2.85
SCRT2-201ENST00000246104 APLP2Q06481 763 aa32.82■■■□□ 2.84
SCRT2-201ENST00000246104 ITGAEP38570 1179 aa32.8■■■□□ 2.84
SCRT2-201ENST00000246104 CSRNP3Q8WYN3 585 aa32.79■■■□□ 2.84
SCRT2-201ENST00000246104 PABPN1Q86U42 306 aaKnown RBP eCLIP32.76■■■□□ 2.84
SCRT2-201ENST00000246104 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
SCRT2-201ENST00000246104 BCANQ96GW7 911 aa32.66■■■□□ 2.82
SCRT2-201ENST00000246104 TNIKQ9UKE5 1360 aa32.32■■■□□ 2.76
SCRT2-201ENST00000246104 KCNH8Q96L42 1107 aa32.32■■■□□ 2.76
SCRT2-201ENST00000246104 HIRIP3Q9BW71 556 aaPredicted RBP32.24■■■□□ 2.75
SCRT2-201ENST00000246104 MYT1Q01538 1121 aa32.22■■■□□ 2.75
SCRT2-201ENST00000246104 SUPT16HQ9Y5B9 1047 aaKnown RBP32.2■■■□□ 2.75
SCRT2-201ENST00000246104 ATP1B4Q9UN42 357 aaPredicted RBP32.17■■■□□ 2.74
SCRT2-201ENST00000246104 CLIP1P30622 1438 aa32.15■■■□□ 2.74
SCRT2-201ENST00000246104 WRNQ14191 1432 aaPredicted RBP eCLIP32.15■■■□□ 2.74
SCRT2-201ENST00000246104 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
SCRT2-201ENST00000246104 KANK4Q5T7N3 995 aaPredicted RBP32.05■■■□□ 2.72
SCRT2-201ENST00000246104 BAZ1AQ9NRL2 1556 aaPredicted RBP32.03■■■□□ 2.72
SCRT2-201ENST00000246104 DDX10Q13206 875 aaKnown RBP31.94■■■□□ 2.7
SCRT2-201ENST00000246104 FKBP8Q14318 412 aa31.93■■■□□ 2.7
SCRT2-201ENST00000246104 NACADO15069 1562 aa31.9■■■□□ 2.7
SCRT2-201ENST00000246104 TRIM52Q96A61 297 aa31.9■■■□□ 2.7
SCRT2-201ENST00000246104 TSHZ2Q9NRE2 1034 aa31.89■■■□□ 2.7
SCRT2-201ENST00000246104 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
SCRT2-201ENST00000246104 RAPGEF2Q9Y4G8 1499 aa31.83■■■□□ 2.69
SCRT2-201ENST00000246104 P3H3Q8IVL6 736 aa31.81■■■□□ 2.68
SCRT2-201ENST00000246104 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
SCRT2-201ENST00000246104 FAM50AQ14320 339 aaKnown RBP31.78■■■□□ 2.68
SCRT2-201ENST00000246104 SIN3AQ96ST3 1273 aa31.77■■■□□ 2.68
SCRT2-201ENST00000246104 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.67
SCRT2-201ENST00000246104 IRX6P78412 446 aaPredicted RBP31.72■■■□□ 2.67
SCRT2-201ENST00000246104 VPS8Q8N3P4 1428 aa31.72■■■□□ 2.67
SCRT2-201ENST00000246104 DHX57Q6P158 1386 aaKnown RBP31.71■■■□□ 2.67
SCRT2-201ENST00000246104 CNGB1Q14028 1251 aaPredicted RBP31.71■■■□□ 2.67
SCRT2-201ENST00000246104 CEP164Q9UPV0 1460 aa31.68■■■□□ 2.66
SCRT2-201ENST00000246104 EEA1Q15075 1411 aa31.65■■■□□ 2.66
SCRT2-201ENST00000246104 SMARCA4P51532 1647 aa31.63■■■□□ 2.65
SCRT2-201ENST00000246104 NEFLP07196 543 aa31.57■■■□□ 2.64
SCRT2-201ENST00000246104 ANP32EQ9BTT0 268 aa31.55■■■□□ 2.64
SCRT2-201ENST00000246104 SYNJ1O43426 1573 aa31.52■■■□□ 2.64
SCRT2-201ENST00000246104 SENP3-EIF4A1A0A087X0R7 540 aa31.46■■■□□ 2.63
SCRT2-201ENST00000246104 KIF21BO75037 1637 aa31.4■■■□□ 2.62
SCRT2-201ENST00000246104 BCL11AQ9H165 835 aa31.34■■■□□ 2.61
SCRT2-201ENST00000246104 RBM19Q9Y4C8 960 aaKnown RBP31.29■■■□□ 2.6
SCRT2-201ENST00000246104 RAB3GAP2Q9H2M9 1393 aa31.29■■■□□ 2.6
SCRT2-201ENST00000246104 CCNB3Q8WWL7 1395 aa31.26■■■□□ 2.6
SCRT2-201ENST00000246104 ANP32CO43423 234 aa31.25■■■□□ 2.59
SCRT2-201ENST00000246104 ERICH6Q7L0X2 663 aa31.2■■■□□ 2.59
SCRT2-201ENST00000246104 ARAP1Q96P48 1450 aa31.2■■■□□ 2.58
SCRT2-201ENST00000246104 HNRNPUQ00839 825 aaKnown RBP eCLIP31.19■■■□□ 2.58
SCRT2-201ENST00000246104 ARID3CA6NKF2 412 aa31.15■■■□□ 2.58
SCRT2-201ENST00000246104 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
SCRT2-201ENST00000246104 CLSPNQ9HAW4 1339 aa31.09■■■□□ 2.57
SCRT2-201ENST00000246104 POLR3GLQ9BT43 218 aa31.09■■■□□ 2.57
SCRT2-201ENST00000246104 CHIC2Q9UKJ5 165 aa30.99■■■□□ 2.55
SCRT2-201ENST00000246104 FAM9BQ8IZU0 186 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms