RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 NISCHQ9Y2I1 1504 aa50.41■■■■■ 5.66
TNFRSF10B-202ENST00000347739 CCDC180Q9P1Z9 1646 aa43.87■■■■■ 4.61
TNFRSF10B-202ENST00000347739 ZCCHC6Q5VYS8 1495 aaKnown RBP42.44■■■■■ 4.38
TNFRSF10B-202ENST00000347739 DCAF1Q9Y4B6 1507 aa41.75■■■■■ 4.27
TNFRSF10B-202ENST00000347739 DCAF8L2P0C7V8 631 aa41.33■■■■■ 4.21
TNFRSF10B-202ENST00000347739 SHROOM4Q9ULL8 1493 aa41.21■■■■■ 4.19
TNFRSF10B-202ENST00000347739 MYO15BQ96JP2 1530 aa41.14■■■■■ 4.18
TNFRSF10B-202ENST00000347739 ABCC9O60706 1549 aa41.06■■■■■ 4.16
TNFRSF10B-202ENST00000347739 NACADO15069 1562 aa40.75■■■■■ 4.11
TNFRSF10B-202ENST00000347739 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
TNFRSF10B-202ENST00000347739 SCRIBQ14160 1630 aa40.3■■■■■ 4.04
TNFRSF10B-202ENST00000347739 SUPT5HO00267 1087 aaKnown RBP39.79■■■■□ 3.96
TNFRSF10B-202ENST00000347739 UNC13AQ9UPW8 1703 aa39.55■■■■□ 3.92
TNFRSF10B-202ENST00000347739 RSF1Q96T23 1441 aaPredicted RBP39.2■■■■□ 3.87
TNFRSF10B-202ENST00000347739 CECR2Q9BXF3 1484 aa39.1■■■■□ 3.85
TNFRSF10B-202ENST00000347739 BICRAQ9NZM4 1560 aa39.1■■■■□ 3.85
TNFRSF10B-202ENST00000347739 MROH2BQ7Z745 1585 aa38.93■■■■□ 3.82
TNFRSF10B-202ENST00000347739 BAZ1AQ9NRL2 1556 aaPredicted RBP38.92■■■■□ 3.82
TNFRSF10B-202ENST00000347739 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
TNFRSF10B-202ENST00000347739 SMARCA4P51532 1647 aa38.7■■■■□ 3.79
TNFRSF10B-202ENST00000347739 WIZO95785 1651 aa38.64■■■■□ 3.78
TNFRSF10B-202ENST00000347739 CHIC1Q5VXU3 224 aa38.33■■■■□ 3.73
TNFRSF10B-202ENST00000347739 TOP2AP11388 1531 aaKnown RBP38.28■■■■□ 3.72
TNFRSF10B-202ENST00000347739 PEG3Q9GZU2 1588 aa38.26■■■■□ 3.72
TNFRSF10B-202ENST00000347739 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
TNFRSF10B-202ENST00000347739 ATAD2BQ9ULI0 1458 aa37.95■■■■□ 3.67
TNFRSF10B-202ENST00000347739 EIF4G1Q04637 1599 aaKnown RBP37.88■■■■□ 3.65
TNFRSF10B-202ENST00000347739 CCDC88BA6NC98 1476 aa37.86■■■■□ 3.65
TNFRSF10B-202ENST00000347739 BAZ1BQ9UIG0 1483 aaKnown RBP37.75■■■■□ 3.63
TNFRSF10B-202ENST00000347739 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
TNFRSF10B-202ENST00000347739 NCAPD3P42695 1498 aa37.59■■■■□ 3.61
TNFRSF10B-202ENST00000347739 TRIM41Q8WV44 630 aa37.44■■■■□ 3.58
TNFRSF10B-202ENST00000347739 CC2D2AQ9P2K1 1620 aa37.23■■■■□ 3.55
TNFRSF10B-202ENST00000347739 ABCC8Q09428 1581 aa37.15■■■■□ 3.54
TNFRSF10B-202ENST00000347739 WRNQ14191 1432 aaPredicted RBP eCLIP36.89■■■■□ 3.5
TNFRSF10B-202ENST00000347739 CFTRP13569 1480 aa36.85■■■■□ 3.49
TNFRSF10B-202ENST00000347739 LOC105371045A0A1W2PR82 267 aa36.82■■■■□ 3.48
TNFRSF10B-202ENST00000347739 PRDM2Q13029 1718 aa36.75■■■■□ 3.47
TNFRSF10B-202ENST00000347739 SYNJ1O43426 1573 aa36.75■■■■□ 3.47
TNFRSF10B-202ENST00000347739 FAM9AQ8IZU1 332 aaPredicted RBP36.69■■■■□ 3.46
TNFRSF10B-202ENST00000347739 CADPSQ9ULU8 1353 aa36.62■■■■□ 3.45
TNFRSF10B-202ENST00000347739 TOP2BQ02880 1626 aa36.61■■■■□ 3.45
TNFRSF10B-202ENST00000347739 BIVM-ERCC5R4GMW8 1640 aa36.58■■■■□ 3.45
TNFRSF10B-202ENST00000347739 EEA1Q15075 1411 aa36.58■■■■□ 3.45
TNFRSF10B-202ENST00000347739 SOGA1O94964 1423 aa36.51■■■■□ 3.43
TNFRSF10B-202ENST00000347739 CUX1P39880 1505 aa36.4■■■■□ 3.42
TNFRSF10B-202ENST00000347739 RUSC2Q8N2Y8 1516 aa36.34■■■■□ 3.41
TNFRSF10B-202ENST00000347739 LAMC3Q9Y6N6 1575 aa36.28■■■■□ 3.4
TNFRSF10B-202ENST00000347739 CSRNP3Q8WYN3 585 aa36.25■■■■□ 3.39
TNFRSF10B-202ENST00000347739 FANCD2Q9BXW9 1451 aa36.22■■■■□ 3.39
TNFRSF10B-202ENST00000347739 NESP48681 1621 aa36.16■■■■□ 3.38
TNFRSF10B-202ENST00000347739 EHMT2Q96KQ7 1210 aa36.11■■■■□ 3.37
TNFRSF10B-202ENST00000347739 KIF21BO75037 1637 aa36.1■■■■□ 3.37
TNFRSF10B-202ENST00000347739 DNAJC5BQ9UF47 199 aa36.08■■■■□ 3.37
TNFRSF10B-202ENST00000347739 GOLGA3Q08378 1498 aa36.05■■■■□ 3.36
TNFRSF10B-202ENST00000347739 CEP164Q9UPV0 1460 aa36.04■■■■□ 3.36
TNFRSF10B-202ENST00000347739 TNIKQ9UKE5 1360 aa36■■■■□ 3.35
TNFRSF10B-202ENST00000347739 DNMBPQ6XZF7 1577 aa36■■■■□ 3.35
TNFRSF10B-202ENST00000347739 PDS5BQ9NTI5 1447 aa35.94■■■■□ 3.34
TNFRSF10B-202ENST00000347739 FGD5Q6ZNL6 1462 aa35.93■■■■□ 3.34
TNFRSF10B-202ENST00000347739 KIF27Q86VH2 1401 aa35.93■■■■□ 3.34
TNFRSF10B-202ENST00000347739 TOPBP1Q92547 1522 aa35.88■■■■□ 3.33
TNFRSF10B-202ENST00000347739 CEP162Q5TB80 1403 aa35.82■■■■□ 3.32
TNFRSF10B-202ENST00000347739 ERICH3Q5RHP9 1530 aa35.8■■■■□ 3.32
TNFRSF10B-202ENST00000347739 PRXQ9BXM0 1461 aa35.8■■■■□ 3.32
TNFRSF10B-202ENST00000347739 KIF21AQ7Z4S6 1674 aa35.79■■■■□ 3.32
TNFRSF10B-202ENST00000347739 UBTFP17480 764 aaKnown RBP35.77■■■■□ 3.32
TNFRSF10B-202ENST00000347739 RAPGEF2Q9Y4G8 1499 aa35.77■■■■□ 3.32
TNFRSF10B-202ENST00000347739 URB2Q14146 1524 aaKnown RBP35.76■■■■□ 3.32
TNFRSF10B-202ENST00000347739 CUX2O14529 1486 aa35.74■■■■□ 3.31
TNFRSF10B-202ENST00000347739 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
TNFRSF10B-202ENST00000347739 ABCA10Q8WWZ4 1543 aa35.66■■■■□ 3.3
TNFRSF10B-202ENST00000347739 RAD54L2Q9Y4B4 1467 aa35.57■■■■□ 3.28
TNFRSF10B-202ENST00000347739 WDR97A6NE52 1622 aa35.56■■■■□ 3.28
TNFRSF10B-202ENST00000347739 IGF1RP08069 1367 aa35.56■■■■□ 3.28
TNFRSF10B-202ENST00000347739 MRC2Q9UBG0 1479 aa35.47■■■■□ 3.27
TNFRSF10B-202ENST00000347739 PCGF6Q9BYE7 350 aa35.46■■■■□ 3.27
TNFRSF10B-202ENST00000347739 CLIP1P30622 1438 aa35.46■■■■□ 3.27
TNFRSF10B-202ENST00000347739 TRIM26Q12899 539 aaPredicted RBP35.46■■■■□ 3.27
TNFRSF10B-202ENST00000347739 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
TNFRSF10B-202ENST00000347739 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
TNFRSF10B-202ENST00000347739 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
TNFRSF10B-202ENST00000347739 CUL7Q14999 1698 aa35.34■■■■□ 3.25
TNFRSF10B-202ENST00000347739 WDR62O43379 1518 aa35.3■■■■□ 3.24
TNFRSF10B-202ENST00000347739 VPS8Q8N3P4 1428 aa35.22■■■■□ 3.23
TNFRSF10B-202ENST00000347739 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
TNFRSF10B-202ENST00000347739 ERCC6Q03468 1493 aa35.17■■■■□ 3.22
TNFRSF10B-202ENST00000347739 TDRD9Q8NDG6 1382 aaKnown RBP35.17■■■■□ 3.22
TNFRSF10B-202ENST00000347739 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.22
TNFRSF10B-202ENST00000347739 ARAP1Q96P48 1450 aa35.1■■■■□ 3.21
TNFRSF10B-202ENST00000347739 IFT140Q96RY7 1462 aa35.1■■■■□ 3.21
TNFRSF10B-202ENST00000347739 PBRM1Q86U86 1689 aa35.05■■■■□ 3.2
TNFRSF10B-202ENST00000347739 ARHGAP35Q9NRY4 1499 aa35.03■■■■□ 3.2
TNFRSF10B-202ENST00000347739 RANGAP1P46060 587 aaPredicted RBP35.02■■■■□ 3.2
TNFRSF10B-202ENST00000347739 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.19
TNFRSF10B-202ENST00000347739 CTTNBP2Q8WZ74 1663 aa35■■■■□ 3.19
TNFRSF10B-202ENST00000347739 AQRO60306 1485 aaKnown RBP eCLIP34.92■■■■□ 3.184e-7■■■■□ 26.3
TNFRSF10B-202ENST00000347739 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
TNFRSF10B-202ENST00000347739 ADAMTS12P58397 1594 aa34.87■■■■□ 3.17
TNFRSF10B-202ENST00000347739 ZNF608Q9ULD9 1512 aaPredicted RBP34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms