RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 NISCHQ9Y2I1 1504 aa58.07■■■■■ 6.89
CDKN2B-202ENST00000380142 ABCC9O60706 1549 aa52.56■■■■■ 6
CDKN2B-202ENST00000380142 CCDC180Q9P1Z9 1646 aa52.27■■■■■ 5.96
CDKN2B-202ENST00000380142 RB1CC1Q8TDY2 1594 aa49.84■■■■■ 5.57
CDKN2B-202ENST00000380142 DNAJC5BQ9UF47 199 aa49.69■■■■■ 5.55
CDKN2B-202ENST00000380142 NACADO15069 1562 aa49.43■■■■■ 5.5
CDKN2B-202ENST00000380142 DCAF8L2P0C7V8 631 aa49■■■■■ 5.43
CDKN2B-202ENST00000380142 UNC13AQ9UPW8 1703 aa48.96■■■■■ 5.43
CDKN2B-202ENST00000380142 PABPN1Q86U42 306 aaKnown RBP eCLIP48.86■■■■■ 5.41
CDKN2B-202ENST00000380142 MYO15BQ96JP2 1530 aa48.65■■■■■ 5.38
CDKN2B-202ENST00000380142 BICRAQ9NZM4 1560 aa48.56■■■■■ 5.36
CDKN2B-202ENST00000380142 ZCCHC6Q5VYS8 1495 aaKnown RBP48.08■■■■■ 5.29
CDKN2B-202ENST00000380142 DCAF1Q9Y4B6 1507 aa47.92■■■■■ 5.26
CDKN2B-202ENST00000380142 SHROOM4Q9ULL8 1493 aa47.67■■■■■ 5.22
CDKN2B-202ENST00000380142 SCRIBQ14160 1630 aa47.62■■■■■ 5.21
CDKN2B-202ENST00000380142 CC2D2AQ9P2K1 1620 aa47.51■■■■■ 5.2
CDKN2B-202ENST00000380142 CECR2Q9BXF3 1484 aa47.34■■■■■ 5.17
CDKN2B-202ENST00000380142 EIF4G1Q04637 1599 aaKnown RBP47.31■■■■■ 5.16
CDKN2B-202ENST00000380142 DNAJC5Q9H3Z4 198 aa45.72■■■■■ 4.91
CDKN2B-202ENST00000380142 NCAPD3P42695 1498 aa45.66■■■■■ 4.9
CDKN2B-202ENST00000380142 ATAD2BQ9ULI0 1458 aa45.49■■■■■ 4.87
CDKN2B-202ENST00000380142 SMARCA4P51532 1647 aa45.41■■■■■ 4.86
CDKN2B-202ENST00000380142 CUX2O14529 1486 aa45.36■■■■■ 4.85
CDKN2B-202ENST00000380142 HMGXB3Q12766 1538 aa45.29■■■■■ 4.84
CDKN2B-202ENST00000380142 ERCC6Q03468 1493 aa45.29■■■■■ 4.84
CDKN2B-202ENST00000380142 SMARCA2P51531 1590 aa45.28■■■■■ 4.84
CDKN2B-202ENST00000380142 NESP48681 1621 aa45.12■■■■■ 4.81
CDKN2B-202ENST00000380142 BAZ1AQ9NRL2 1556 aaPredicted RBP45.06■■■■■ 4.8
CDKN2B-202ENST00000380142 BAZ1BQ9UIG0 1483 aaKnown RBP44.98■■■■■ 4.79
CDKN2B-202ENST00000380142 PEG3Q9GZU2 1588 aa44.96■■■■■ 4.79
CDKN2B-202ENST00000380142 MROH2BQ7Z745 1585 aa44.8■■■■■ 4.76
CDKN2B-202ENST00000380142 THOC2Q8NI27 1593 aaKnown RBP44.75■■■■■ 4.75
CDKN2B-202ENST00000380142 LAMC3Q9Y6N6 1575 aa44.67■■■■■ 4.74
CDKN2B-202ENST00000380142 KIF21AQ7Z4S6 1674 aa44.57■■■■■ 4.73
CDKN2B-202ENST00000380142 PDS5BQ9NTI5 1447 aa44.33■■■■■ 4.69
CDKN2B-202ENST00000380142 WIZO95785 1651 aa44.28■■■■■ 4.68
CDKN2B-202ENST00000380142 CADPSQ9ULU8 1353 aa44.22■■■■■ 4.67
CDKN2B-202ENST00000380142 MRC2Q9UBG0 1479 aa44.05■■■■■ 4.64
CDKN2B-202ENST00000380142 WDR62O43379 1518 aa44■■■■■ 4.63
CDKN2B-202ENST00000380142 CEP164Q9UPV0 1460 aa43.78■■■■■ 4.6
CDKN2B-202ENST00000380142 FANCD2Q9BXW9 1451 aa43.74■■■■■ 4.59
CDKN2B-202ENST00000380142 RSF1Q96T23 1441 aaPredicted RBP43.71■■■■■ 4.59
CDKN2B-202ENST00000380142 CFTRP13569 1480 aa43.69■■■■■ 4.58
CDKN2B-202ENST00000380142 TOP2AP11388 1531 aaKnown RBP43.61■■■■■ 4.57
CDKN2B-202ENST00000380142 TRIM41Q8WV44 630 aa43.53■■■■■ 4.56
CDKN2B-202ENST00000380142 URB2Q14146 1524 aaKnown RBP43.48■■■■■ 4.55
CDKN2B-202ENST00000380142 PRDM2Q13029 1718 aa43.34■■■■■ 4.53
CDKN2B-202ENST00000380142 OSCARQ8IYS5 282 aa43.18■■■■■ 4.5
CDKN2B-202ENST00000380142 CCDC88BA6NC98 1476 aa43.13■■■■■ 4.5
CDKN2B-202ENST00000380142 ZNF608Q9ULD9 1512 aaPredicted RBP42.99■■■■■ 4.47
CDKN2B-202ENST00000380142 IFT140Q96RY7 1462 aa42.93■■■■■ 4.46
CDKN2B-202ENST00000380142 TOPBP1Q92547 1522 aa42.92■■■■■ 4.46
CDKN2B-202ENST00000380142 RIMBP3CA6NJZ7 1639 aa42.83■■■■■ 4.45
CDKN2B-202ENST00000380142 RIMBP3BA6NNM3 1639 aa42.83■■■■■ 4.45
CDKN2B-202ENST00000380142 RIMBP3Q9UFD9 1639 aa42.83■■■■■ 4.45
CDKN2B-202ENST00000380142 EIF4G3O43432 1585 aaKnown RBP42.73■■■■■ 4.43
CDKN2B-202ENST00000380142 DNMBPQ6XZF7 1577 aa42.71■■■■■ 4.43
CDKN2B-202ENST00000380142 ABCC8Q09428 1581 aa42.68■■■■■ 4.42
CDKN2B-202ENST00000380142 TARBP1Q13395 1621 aaKnown RBP42.62■■■■■ 4.41
CDKN2B-202ENST00000380142 ARHGEF11O15085 1522 aa42.61■■■■■ 4.41
CDKN2B-202ENST00000380142 CHD1O14646 1710 aa42.54■■■■■ 4.4
CDKN2B-202ENST00000380142 AQRO60306 1485 aaKnown RBP eCLIP42.52■■■■■ 4.4
CDKN2B-202ENST00000380142 POLA1P09884 1462 aaPredicted RBP42.45■■■■■ 4.39
CDKN2B-202ENST00000380142 RAD54L2Q9Y4B4 1467 aa42.33■■■■■ 4.37
CDKN2B-202ENST00000380142 CYB5RLQ6IPT4 315 aa42.23■■■■■ 4.35
CDKN2B-202ENST00000380142 ARAP1Q96P48 1450 aa42.2■■■■■ 4.35
CDKN2B-202ENST00000380142 SOGA1O94964 1423 aa42.19■■■■■ 4.34
CDKN2B-202ENST00000380142 TDRD9Q8NDG6 1382 aaKnown RBP42.18■■■■■ 4.34
CDKN2B-202ENST00000380142 FBLN2P98095 1184 aa42.17■■■■■ 4.34
CDKN2B-202ENST00000380142 FGD5Q6ZNL6 1462 aa42.14■■■■■ 4.34
CDKN2B-202ENST00000380142 CUX1P39880 1505 aa42.1■■■■■ 4.33
CDKN2B-202ENST00000380142 SNAPC4Q5SXM2 1469 aa42.07■■■■■ 4.33
CDKN2B-202ENST00000380142 WDR97A6NE52 1622 aa42.05■■■■■ 4.32
CDKN2B-202ENST00000380142 CLASP1Q7Z460 1538 aa42■■■■■ 4.31
CDKN2B-202ENST00000380142 MAGI1Q96QZ7 1491 aaPredicted RBP41.9■■■■■ 4.3
CDKN2B-202ENST00000380142 GRIN2BQ13224 1484 aa41.86■■■■■ 4.29
CDKN2B-202ENST00000380142 SYNJ1O43426 1573 aa41.84■■■■■ 4.29
CDKN2B-202ENST00000380142 CHMP7Q8WUX9 453 aaPredicted RBP41.81■■■■■ 4.28
CDKN2B-202ENST00000380142 PBRM1Q86U86 1689 aa41.8■■■■■ 4.28
CDKN2B-202ENST00000380142 TRHP20396 242 aaPredicted RBP41.79■■■■■ 4.28
CDKN2B-202ENST00000380142 SYNJ2O15056 1496 aa41.77■■■■■ 4.28
CDKN2B-202ENST00000380142 GAPVD1Q14C86 1478 aa41.69■■■■■ 4.26
CDKN2B-202ENST00000380142 ABCA5Q8WWZ7 1642 aa41.66■■■■■ 4.26
CDKN2B-202ENST00000380142 ABCA10Q8WWZ4 1543 aa41.63■■■■■ 4.25
CDKN2B-202ENST00000380142 SUPT5HO00267 1087 aaKnown RBP41.44■■■■■ 4.22
CDKN2B-202ENST00000380142 ERCC6L2Q5T890 1561 aa41.38■■■■■ 4.22
CDKN2B-202ENST00000380142 GRIN2AQ12879 1464 aa41.36■■■■■ 4.21
CDKN2B-202ENST00000380142 ADAMTS12P58397 1594 aa41.35■■■■■ 4.21
CDKN2B-202ENST00000380142 BIVM-ERCC5R4GMW8 1640 aa41.35■■■■■ 4.21
CDKN2B-202ENST00000380142 WRNQ14191 1432 aaPredicted RBP eCLIP41.31■■■■■ 4.2
CDKN2B-202ENST00000380142 TOP2BQ02880 1626 aa41.3■■■■■ 4.2
CDKN2B-202ENST00000380142 CEP170Q5SW79 1584 aa41.3■■■■■ 4.2
CDKN2B-202ENST00000380142 NUP160Q12769 1436 aa41.26■■■■■ 4.19
CDKN2B-202ENST00000380142 SHROOM2Q13796 1616 aa41.18■■■■■ 4.18
CDKN2B-202ENST00000380142 FHAD1B1AJZ9 1412 aa41.13■■■■■ 4.17
CDKN2B-202ENST00000380142 ERICH3Q5RHP9 1530 aa41.08■■■■■ 4.17
CDKN2B-202ENST00000380142 KIF13AQ9H1H9 1805 aa40.86■■■■■ 4.13
CDKN2B-202ENST00000380142 PRG4Q92954 1404 aaPredicted RBP40.84■■■■■ 4.13
CDKN2B-202ENST00000380142 RUSC2Q8N2Y8 1516 aa40.78■■■■■ 4.12
CDKN2B-202ENST00000380142 JPH4Q96JJ6 628 aa40.76■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms