RNA–Protein interactions for RNA: ENST00000233154.8

NCK2-201, Transcript of NCK adaptor protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCK2, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2-201ENST00000233154 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
NCK2-201ENST00000233154 CCDC180Q9P1Z9 1646 aa40.11■■■■■ 4.01
NCK2-201ENST00000233154 SHROOM4Q9ULL8 1493 aa40■■■■□ 3.99
NCK2-201ENST00000233154 ZCCHC6Q5VYS8 1495 aaKnown RBP39.71■■■■□ 3.95
NCK2-201ENST00000233154 DCAF8L2P0C7V8 631 aa39.17■■■■□ 3.86
NCK2-201ENST00000233154 SUPT5HO00267 1087 aaKnown RBP39.03■■■■□ 3.84
NCK2-201ENST00000233154 DCAF1Q9Y4B6 1507 aa38.5■■■■□ 3.75
NCK2-201ENST00000233154 CHIC1Q5VXU3 224 aa37.74■■■■□ 3.63
NCK2-201ENST00000233154 SCRIBQ14160 1630 aa37.66■■■■□ 3.62
NCK2-201ENST00000233154 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
NCK2-201ENST00000233154 ABCC9O60706 1549 aa37.51■■■■□ 3.6
NCK2-201ENST00000233154 NACADO15069 1562 aa37.13■■■■□ 3.53
NCK2-201ENST00000233154 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
NCK2-201ENST00000233154 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
NCK2-201ENST00000233154 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
NCK2-201ENST00000233154 LOC105371045A0A1W2PR82 267 aa36.7■■■■□ 3.46
NCK2-201ENST00000233154 MROH2BQ7Z745 1585 aa36.6■■■■□ 3.45
NCK2-201ENST00000233154 WIZO95785 1651 aa36.43■■■■□ 3.42
NCK2-201ENST00000233154 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
NCK2-201ENST00000233154 PCGF6Q9BYE7 350 aa36.3■■■■□ 3.4
NCK2-201ENST00000233154 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
NCK2-201ENST00000233154 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
NCK2-201ENST00000233154 FAM9AQ8IZU1 332 aaPredicted RBP36.11■■■■□ 3.37
NCK2-201ENST00000233154 HRCP23327 699 aa36.01■■■■□ 3.36
NCK2-201ENST00000233154 SMARCA4P51532 1647 aa35.91■■■■□ 3.34
NCK2-201ENST00000233154 EHMT2Q96KQ7 1210 aa35.89■■■■□ 3.34
NCK2-201ENST00000233154 PABPN1Q86U42 306 aaKnown RBP eCLIP35.84■■■■□ 3.33
NCK2-201ENST00000233154 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.32
NCK2-201ENST00000233154 EIF4G1Q04637 1599 aaKnown RBP35.75■■■■□ 3.31
NCK2-201ENST00000233154 BICRAQ9NZM4 1560 aa35.71■■■■□ 3.31
NCK2-201ENST00000233154 CCDC88BA6NC98 1476 aa35.64■■■■□ 3.3
NCK2-201ENST00000233154 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
NCK2-201ENST00000233154 TRIM26Q12899 539 aaPredicted RBP35.59■■■■□ 3.29
NCK2-201ENST00000233154 ABCC8Q09428 1581 aa35.51■■■■□ 3.28
NCK2-201ENST00000233154 PPARGC1BQ86YN6 1023 aaKnown RBP35.47■■■■□ 3.27
NCK2-201ENST00000233154 PEG3Q9GZU2 1588 aa35.17■■■■□ 3.22
NCK2-201ENST00000233154 SOGA1O94964 1423 aa35.09■■■■□ 3.21
NCK2-201ENST00000233154 ATAD2BQ9ULI0 1458 aa35.04■■■■□ 3.2
NCK2-201ENST00000233154 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
NCK2-201ENST00000233154 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
NCK2-201ENST00000233154 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
NCK2-201ENST00000233154 CSRNP3Q8WYN3 585 aa34.78■■■■□ 3.16
NCK2-201ENST00000233154 SYNJ1O43426 1573 aa34.77■■■■□ 3.16
NCK2-201ENST00000233154 CEP162Q5TB80 1403 aa34.73■■■■□ 3.15
NCK2-201ENST00000233154 EEA1Q15075 1411 aa34.69■■■■□ 3.14
NCK2-201ENST00000233154 UBTFP17480 764 aaKnown RBP34.66■■■■□ 3.14
NCK2-201ENST00000233154 TNIKQ9UKE5 1360 aa34.64■■■■□ 3.14
NCK2-201ENST00000233154 TTBK1Q5TCY1 1321 aaPredicted RBP34.63■■■■□ 3.13
NCK2-201ENST00000233154 ZEB1P37275 1124 aaPredicted RBP34.56■■■■□ 3.12
NCK2-201ENST00000233154 GOLGA3Q08378 1498 aa34.52■■■■□ 3.12
NCK2-201ENST00000233154 NCAPD3P42695 1498 aa34.37■■■■□ 3.09
NCK2-201ENST00000233154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.35■■■■□ 3.09
NCK2-201ENST00000233154 CEP164Q9UPV0 1460 aa34.34■■■■□ 3.09
NCK2-201ENST00000233154 HMGXB3Q12766 1538 aa34.34■■■■□ 3.09
NCK2-201ENST00000233154 KIF21BO75037 1637 aa34.32■■■■□ 3.08
NCK2-201ENST00000233154 TOP2BQ02880 1626 aa34.31■■■■□ 3.08
NCK2-201ENST00000233154 RAPGEF2Q9Y4G8 1499 aa34.23■■■■□ 3.07
NCK2-201ENST00000233154 BIVM-ERCC5R4GMW8 1640 aa34.2■■■■□ 3.06
NCK2-201ENST00000233154 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
NCK2-201ENST00000233154 CCER1Q8TC90 406 aaPredicted RBP34.17■■■■□ 3.06
NCK2-201ENST00000233154 CLIP1P30622 1438 aa34.14■■■■□ 3.06
NCK2-201ENST00000233154 CUX1P39880 1505 aa34.09■■■■□ 3.05
NCK2-201ENST00000233154 CFTRP13569 1480 aa34.03■■■■□ 3.04
NCK2-201ENST00000233154 VPS8Q8N3P4 1428 aa33.93■■■■□ 3.02
NCK2-201ENST00000233154 PRXQ9BXM0 1461 aa33.87■■■■□ 3.01
NCK2-201ENST00000233154 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
NCK2-201ENST00000233154 PRDM2Q13029 1718 aa33.79■■■■□ 3
NCK2-201ENST00000233154 KIF27Q86VH2 1401 aa33.78■■■■□ 3
NCK2-201ENST00000233154 CC2D2AQ9P2K1 1620 aa33.76■■■■□ 3
NCK2-201ENST00000233154 HNRNPUL2Q1KMD3 747 aaKnown RBP33.75■■■□□ 2.99
NCK2-201ENST00000233154 APLP2Q06481 763 aa33.74■■■□□ 2.99
NCK2-201ENST00000233154 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.99
NCK2-201ENST00000233154 ARAP1Q96P48 1450 aa33.66■■■□□ 2.98
NCK2-201ENST00000233154 CUX2O14529 1486 aa33.58■■■□□ 2.97
NCK2-201ENST00000233154 FGD5Q6ZNL6 1462 aa33.52■■■□□ 2.96
NCK2-201ENST00000233154 KANK4Q5T7N3 995 aaPredicted RBP33.47■■■□□ 2.95
NCK2-201ENST00000233154 IGF1RP08069 1367 aa33.47■■■□□ 2.95
NCK2-201ENST00000233154 FANCD2Q9BXW9 1451 aa33.42■■■□□ 2.94
NCK2-201ENST00000233154 ARHGAP35Q9NRY4 1499 aa33.42■■■□□ 2.94
NCK2-201ENST00000233154 NESP48681 1621 aa33.37■■■□□ 2.93
NCK2-201ENST00000233154 CARMIL1Q5VZK9 1371 aa33.32■■■□□ 2.92
NCK2-201ENST00000233154 DIEXFQ68CQ4 756 aaKnown RBP33.29■■■□□ 2.92
NCK2-201ENST00000233154 RAD54L2Q9Y4B4 1467 aa33.26■■■□□ 2.91
NCK2-201ENST00000233154 DNMBPQ6XZF7 1577 aa33.19■■■□□ 2.9
NCK2-201ENST00000233154 TOPBP1Q92547 1522 aa33.18■■■□□ 2.9
NCK2-201ENST00000233154 POLA1P09884 1462 aaPredicted RBP33.15■■■□□ 2.9
NCK2-201ENST00000233154 ZNF316A6NFI3 1004 aaPredicted RBP33.12■■■□□ 2.89
NCK2-201ENST00000233154 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
NCK2-201ENST00000233154 P3H3Q8IVL6 736 aa33.08■■■□□ 2.89
NCK2-201ENST00000233154 RRBP1Q9P2E9 1410 aaKnown RBP33.08■■■□□ 2.89
NCK2-201ENST00000233154 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
NCK2-201ENST00000233154 SCAF1Q9H7N4 1312 aaKnown RBP33.03■■■□□ 2.88
NCK2-201ENST00000233154 ITGAEP38570 1179 aa33.01■■■□□ 2.87
NCK2-201ENST00000233154 URB2Q14146 1524 aaKnown RBP32.99■■■□□ 2.87
NCK2-201ENST00000233154 TIAM1Q13009 1591 aa32.99■■■□□ 2.87
NCK2-201ENST00000233154 CCNB3Q8WWL7 1395 aa32.98■■■□□ 2.87
NCK2-201ENST00000233154 DHX57Q6P158 1386 aaKnown RBP32.98■■■□□ 2.87
NCK2-201ENST00000233154 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.87
NCK2-201ENST00000233154 ATP1B4Q9UN42 357 aaPredicted RBP32.91■■■□□ 2.86
NCK2-201ENST00000233154 FHOD3Q2V2M9 1422 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms