RNA–Protein interactions for RNA: ENST00000322048.11

ROGDI-201, Transcript of rogdi homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROGDI, Length 1,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-201ENST00000322048 NISCHQ9Y2I1 1504 aa51.11■■■■■ 5.77
ROGDI-201ENST00000322048 CCDC180Q9P1Z9 1646 aa45.18■■■■■ 4.82
ROGDI-201ENST00000322048 ABCC9O60706 1549 aa43.97■■■■■ 4.63
ROGDI-201ENST00000322048 ZCCHC6Q5VYS8 1495 aaKnown RBP42.67■■■■■ 4.42
ROGDI-201ENST00000322048 DCAF8L2P0C7V8 631 aa42.66■■■■■ 4.42
ROGDI-201ENST00000322048 NACADO15069 1562 aa42.39■■■■■ 4.38
ROGDI-201ENST00000322048 RB1CC1Q8TDY2 1594 aa42.35■■■■■ 4.37
ROGDI-201ENST00000322048 MYO15BQ96JP2 1530 aa42.22■■■■■ 4.35
ROGDI-201ENST00000322048 DCAF1Q9Y4B6 1507 aa42.22■■■■■ 4.35
ROGDI-201ENST00000322048 UNC13AQ9UPW8 1703 aa41.49■■■■■ 4.23
ROGDI-201ENST00000322048 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
ROGDI-201ENST00000322048 PABPN1Q86U42 306 aaKnown RBP eCLIP41.19■■■■■ 4.18
ROGDI-201ENST00000322048 SHROOM4Q9ULL8 1493 aa41.18■■■■■ 4.18
ROGDI-201ENST00000322048 BICRAQ9NZM4 1560 aa41.14■■■■■ 4.18
ROGDI-201ENST00000322048 DNAJC5BQ9UF47 199 aa40.03■■■■■ 4
ROGDI-201ENST00000322048 EIF4G1Q04637 1599 aaKnown RBP40■■■■□ 3.99
ROGDI-201ENST00000322048 CECR2Q9BXF3 1484 aa39.86■■■■□ 3.97
ROGDI-201ENST00000322048 CC2D2AQ9P2K1 1620 aa39.75■■■■□ 3.95
ROGDI-201ENST00000322048 SUPT5HO00267 1087 aaKnown RBP39.71■■■■□ 3.95
ROGDI-201ENST00000322048 SMARCA4P51532 1647 aa39.57■■■■□ 3.93
ROGDI-201ENST00000322048 BAZ1AQ9NRL2 1556 aaPredicted RBP39.56■■■■□ 3.92
ROGDI-201ENST00000322048 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
ROGDI-201ENST00000322048 ATAD2BQ9ULI0 1458 aa39.26■■■■□ 3.88
ROGDI-201ENST00000322048 SMARCA2P51531 1590 aa39.18■■■■□ 3.86
ROGDI-201ENST00000322048 PEG3Q9GZU2 1588 aa39.14■■■■□ 3.86
ROGDI-201ENST00000322048 RSF1Q96T23 1441 aaPredicted RBP39.14■■■■□ 3.86
ROGDI-201ENST00000322048 NCAPD3P42695 1498 aa39.13■■■■□ 3.86
ROGDI-201ENST00000322048 WIZO95785 1651 aa39.07■■■■□ 3.84
ROGDI-201ENST00000322048 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
ROGDI-201ENST00000322048 BAZ1BQ9UIG0 1483 aaKnown RBP38.95■■■■□ 3.83
ROGDI-201ENST00000322048 TOP2AP11388 1531 aaKnown RBP38.59■■■■□ 3.77
ROGDI-201ENST00000322048 NESP48681 1621 aa38.19■■■■□ 3.7
ROGDI-201ENST00000322048 CCDC88BA6NC98 1476 aa38.19■■■■□ 3.7
ROGDI-201ENST00000322048 CHIC1Q5VXU3 224 aa38.08■■■■□ 3.69
ROGDI-201ENST00000322048 CADPSQ9ULU8 1353 aa38.04■■■■□ 3.68
ROGDI-201ENST00000322048 LAMC3Q9Y6N6 1575 aa38.03■■■■□ 3.68
ROGDI-201ENST00000322048 CFTRP13569 1480 aa37.91■■■■□ 3.66
ROGDI-201ENST00000322048 ERCC6Q03468 1493 aa37.81■■■■□ 3.64
ROGDI-201ENST00000322048 PDS5BQ9NTI5 1447 aa37.76■■■■□ 3.63
ROGDI-201ENST00000322048 KIF21AQ7Z4S6 1674 aa37.71■■■■□ 3.63
ROGDI-201ENST00000322048 FANCD2Q9BXW9 1451 aa37.63■■■■□ 3.61
ROGDI-201ENST00000322048 PRDM2Q13029 1718 aa37.61■■■■□ 3.61
ROGDI-201ENST00000322048 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
ROGDI-201ENST00000322048 THOC2Q8NI27 1593 aaKnown RBP37.45■■■■□ 3.59
ROGDI-201ENST00000322048 MRC2Q9UBG0 1479 aa37.36■■■■□ 3.57
ROGDI-201ENST00000322048 TRIM41Q8WV44 630 aa37.36■■■■□ 3.57
ROGDI-201ENST00000322048 URB2Q14146 1524 aaKnown RBP37.25■■■■□ 3.55
ROGDI-201ENST00000322048 WDR62O43379 1518 aa37.23■■■■□ 3.55
ROGDI-201ENST00000322048 CUX2O14529 1486 aa37.18■■■■□ 3.54
ROGDI-201ENST00000322048 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
ROGDI-201ENST00000322048 TOPBP1Q92547 1522 aa37.08■■■■□ 3.53
ROGDI-201ENST00000322048 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
ROGDI-201ENST00000322048 CUX1P39880 1505 aa36.98■■■■□ 3.51
ROGDI-201ENST00000322048 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.49
ROGDI-201ENST00000322048 POLA1P09884 1462 aaPredicted RBP36.81■■■■□ 3.48
ROGDI-201ENST00000322048 SYNJ1O43426 1573 aa36.8■■■■□ 3.48
ROGDI-201ENST00000322048 FGD5Q6ZNL6 1462 aa36.78■■■■□ 3.48
ROGDI-201ENST00000322048 TOP2BQ02880 1626 aa36.73■■■■□ 3.47
ROGDI-201ENST00000322048 BIVM-ERCC5R4GMW8 1640 aa36.71■■■■□ 3.47
ROGDI-201ENST00000322048 IFT140Q96RY7 1462 aa36.69■■■■□ 3.46
ROGDI-201ENST00000322048 RAD54L2Q9Y4B4 1467 aa36.68■■■■□ 3.46
ROGDI-201ENST00000322048 FAM9AQ8IZU1 332 aaPredicted RBP36.65■■■■□ 3.46
ROGDI-201ENST00000322048 SOGA1O94964 1423 aa36.64■■■■□ 3.46
ROGDI-201ENST00000322048 TARBP1Q13395 1621 aaKnown RBP36.64■■■■□ 3.46
ROGDI-201ENST00000322048 LOC105371045A0A1W2PR82 267 aa36.61■■■■□ 3.45
ROGDI-201ENST00000322048 ZNF608Q9ULD9 1512 aaPredicted RBP36.6■■■■□ 3.45
ROGDI-201ENST00000322048 EEA1Q15075 1411 aa36.45■■■■□ 3.43
ROGDI-201ENST00000322048 TDRD9Q8NDG6 1382 aaKnown RBP36.44■■■■□ 3.42
ROGDI-201ENST00000322048 AQRO60306 1485 aaKnown RBP eCLIP36.44■■■■□ 3.421e-6■■■■■ 31.5
ROGDI-201ENST00000322048 EIF4G3O43432 1585 aaKnown RBP36.43■■■■□ 3.42
ROGDI-201ENST00000322048 WDR97A6NE52 1622 aa36.43■■■■□ 3.42
ROGDI-201ENST00000322048 ABCA10Q8WWZ4 1543 aa36.4■■■■□ 3.42
ROGDI-201ENST00000322048 RUSC2Q8N2Y8 1516 aa36.24■■■■□ 3.39
ROGDI-201ENST00000322048 ABCA5Q8WWZ7 1642 aa36.23■■■■□ 3.39
ROGDI-201ENST00000322048 GAPVD1Q14C86 1478 aa36.22■■■■□ 3.39
ROGDI-201ENST00000322048 CSRNP3Q8WYN3 585 aa36.19■■■■□ 3.38
ROGDI-201ENST00000322048 GRIN2BQ13224 1484 aa36.13■■■■□ 3.37
ROGDI-201ENST00000322048 PBRM1Q86U86 1689 aa36.12■■■■□ 3.37
ROGDI-201ENST00000322048 EHMT2Q96KQ7 1210 aa36.11■■■■□ 3.37
ROGDI-201ENST00000322048 SNAPC4Q5SXM2 1469 aa36.08■■■■□ 3.37
ROGDI-201ENST00000322048 KIF27Q86VH2 1401 aa36.04■■■■□ 3.36
ROGDI-201ENST00000322048 MAGI1Q96QZ7 1491 aaPredicted RBP35.98■■■■□ 3.35
ROGDI-201ENST00000322048 KIF21BO75037 1637 aa35.97■■■■□ 3.35
ROGDI-201ENST00000322048 ERICH3Q5RHP9 1530 aa35.95■■■■□ 3.35
ROGDI-201ENST00000322048 GOLGA3Q08378 1498 aa35.95■■■■□ 3.34
ROGDI-201ENST00000322048 FBLN2P98095 1184 aa35.94■■■■□ 3.34
ROGDI-201ENST00000322048 CHD1O14646 1710 aa35.89■■■■□ 3.34
ROGDI-201ENST00000322048 IGF1RP08069 1367 aa35.88■■■■□ 3.33
ROGDI-201ENST00000322048 SYNJ2O15056 1496 aa35.86■■■■□ 3.33
ROGDI-201ENST00000322048 ADAMTS12P58397 1594 aa35.85■■■■□ 3.33
ROGDI-201ENST00000322048 CHMP7Q8WUX9 453 aaPredicted RBP35.84■■■■□ 3.33
ROGDI-201ENST00000322048 TNIKQ9UKE5 1360 aa35.83■■■■□ 3.33
ROGDI-201ENST00000322048 FHAD1B1AJZ9 1412 aa35.79■■■■□ 3.32
ROGDI-201ENST00000322048 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
ROGDI-201ENST00000322048 UBTFP17480 764 aaKnown RBP35.76■■■■□ 3.31
ROGDI-201ENST00000322048 CUL7Q14999 1698 aa35.7■■■■□ 3.31
ROGDI-201ENST00000322048 GRIN2AQ12879 1464 aa35.7■■■■□ 3.3
ROGDI-201ENST00000322048 PRXQ9BXM0 1461 aa35.68■■■■□ 3.3
ROGDI-201ENST00000322048 RAPGEF2Q9Y4G8 1499 aa35.66■■■■□ 3.3
ROGDI-201ENST00000322048 CARMIL1Q5VZK9 1371 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms