RNA–Protein interactions for RNA: ENST00000442528.2

SLC35C1-202, Transcript of solute carrier family 35 member C1, humanhuman

TSL 1 (best) BASIC

Gene SLC35C1, Length 1,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35C1-202ENST00000442528 NISCHQ9Y2I1 1504 aa53.54■■■■■ 6.16
SLC35C1-202ENST00000442528 CCDC180Q9P1Z9 1646 aa47.33■■■■■ 5.17
SLC35C1-202ENST00000442528 ABCC9O60706 1549 aa45.55■■■■■ 4.88
SLC35C1-202ENST00000442528 ZCCHC6Q5VYS8 1495 aaKnown RBP44.77■■■■■ 4.76
SLC35C1-202ENST00000442528 DCAF1Q9Y4B6 1507 aa44.36■■■■■ 4.69
SLC35C1-202ENST00000442528 DCAF8L2P0C7V8 631 aa44.36■■■■■ 4.69
SLC35C1-202ENST00000442528 NACADO15069 1562 aa44.29■■■■■ 4.68
SLC35C1-202ENST00000442528 MYO15BQ96JP2 1530 aa44.28■■■■■ 4.68
SLC35C1-202ENST00000442528 RB1CC1Q8TDY2 1594 aa44.17■■■■■ 4.66
SLC35C1-202ENST00000442528 UNC13AQ9UPW8 1703 aa43.24■■■■■ 4.51
SLC35C1-202ENST00000442528 SCRIBQ14160 1630 aa43.2■■■■■ 4.51
SLC35C1-202ENST00000442528 BICRAQ9NZM4 1560 aa42.81■■■■■ 4.44
SLC35C1-202ENST00000442528 SHROOM4Q9ULL8 1493 aa42.67■■■■■ 4.42
SLC35C1-202ENST00000442528 PABPN1Q86U42 306 aaKnown RBP eCLIP42.65■■■■■ 4.42
SLC35C1-202ENST00000442528 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.26
SLC35C1-202ENST00000442528 CECR2Q9BXF3 1484 aa41.61■■■■■ 4.25
SLC35C1-202ENST00000442528 BAZ1AQ9NRL2 1556 aaPredicted RBP41.47■■■■■ 4.23
SLC35C1-202ENST00000442528 SMARCA4P51532 1647 aa41.41■■■■■ 4.22
SLC35C1-202ENST00000442528 CC2D2AQ9P2K1 1620 aa41.28■■■■■ 4.2
SLC35C1-202ENST00000442528 MROH2BQ7Z745 1585 aa41.27■■■■■ 4.2
SLC35C1-202ENST00000442528 DNAJC5BQ9UF47 199 aa41.12■■■■■ 4.17
SLC35C1-202ENST00000442528 RSF1Q96T23 1441 aaPredicted RBP41.04■■■■■ 4.16
SLC35C1-202ENST00000442528 PEG3Q9GZU2 1588 aa41.02■■■■■ 4.16
SLC35C1-202ENST00000442528 SMARCA2P51531 1590 aa40.98■■■■■ 4.15
SLC35C1-202ENST00000442528 ATAD2BQ9ULI0 1458 aa40.98■■■■■ 4.15
SLC35C1-202ENST00000442528 WIZO95785 1651 aa40.88■■■■■ 4.14
SLC35C1-202ENST00000442528 NCAPD3P42695 1498 aa40.85■■■■■ 4.13
SLC35C1-202ENST00000442528 HMGXB3Q12766 1538 aa40.75■■■■■ 4.11
SLC35C1-202ENST00000442528 BAZ1BQ9UIG0 1483 aaKnown RBP40.68■■■■■ 4.1
SLC35C1-202ENST00000442528 SUPT5HO00267 1087 aaKnown RBP40.5■■■■■ 4.07
SLC35C1-202ENST00000442528 TOP2AP11388 1531 aaKnown RBP40.48■■■■■ 4.07
SLC35C1-202ENST00000442528 CCDC88BA6NC98 1476 aa39.98■■■■□ 3.99
SLC35C1-202ENST00000442528 LAMC3Q9Y6N6 1575 aa39.69■■■■□ 3.94
SLC35C1-202ENST00000442528 CADPSQ9ULU8 1353 aa39.68■■■■□ 3.94
SLC35C1-202ENST00000442528 NESP48681 1621 aa39.64■■■■□ 3.94
SLC35C1-202ENST00000442528 CFTRP13569 1480 aa39.62■■■■□ 3.93
SLC35C1-202ENST00000442528 PRDM2Q13029 1718 aa39.46■■■■□ 3.91
SLC35C1-202ENST00000442528 PDS5BQ9NTI5 1447 aa39.36■■■■□ 3.89
SLC35C1-202ENST00000442528 KIF21AQ7Z4S6 1674 aa39.25■■■■□ 3.87
SLC35C1-202ENST00000442528 FANCD2Q9BXW9 1451 aa39.24■■■■□ 3.87
SLC35C1-202ENST00000442528 ERCC6Q03468 1493 aa39.21■■■■□ 3.87
SLC35C1-202ENST00000442528 CEP164Q9UPV0 1460 aa39.13■■■■□ 3.85
SLC35C1-202ENST00000442528 THOC2Q8NI27 1593 aaKnown RBP38.93■■■■□ 3.82
SLC35C1-202ENST00000442528 MRC2Q9UBG0 1479 aa38.91■■■■□ 3.82
SLC35C1-202ENST00000442528 URB2Q14146 1524 aaKnown RBP38.8■■■■□ 3.8
SLC35C1-202ENST00000442528 WDR62O43379 1518 aa38.8■■■■□ 3.8
SLC35C1-202ENST00000442528 ABCC8Q09428 1581 aa38.76■■■■□ 3.8
SLC35C1-202ENST00000442528 DNMBPQ6XZF7 1577 aa38.73■■■■□ 3.79
SLC35C1-202ENST00000442528 TOPBP1Q92547 1522 aa38.7■■■■□ 3.79
SLC35C1-202ENST00000442528 WRNQ14191 1432 aaPredicted RBP eCLIP38.69■■■■□ 3.78
SLC35C1-202ENST00000442528 CUX1P39880 1505 aa38.68■■■■□ 3.78
SLC35C1-202ENST00000442528 SYNJ1O43426 1573 aa38.58■■■■□ 3.77
SLC35C1-202ENST00000442528 TOP2BQ02880 1626 aa38.56■■■■□ 3.76
SLC35C1-202ENST00000442528 BIVM-ERCC5R4GMW8 1640 aa38.56■■■■□ 3.76
SLC35C1-202ENST00000442528 CUX2O14529 1486 aa38.55■■■■□ 3.76
SLC35C1-202ENST00000442528 POLA1P09884 1462 aaPredicted RBP38.43■■■■□ 3.74
SLC35C1-202ENST00000442528 FGD5Q6ZNL6 1462 aa38.43■■■■□ 3.74
SLC35C1-202ENST00000442528 IFT140Q96RY7 1462 aa38.27■■■■□ 3.72
SLC35C1-202ENST00000442528 TARBP1Q13395 1621 aaKnown RBP38.25■■■■□ 3.71
SLC35C1-202ENST00000442528 SOGA1O94964 1423 aa38.24■■■■□ 3.71
SLC35C1-202ENST00000442528 TRIM41Q8WV44 630 aa38.23■■■■□ 3.71
SLC35C1-202ENST00000442528 RAD54L2Q9Y4B4 1467 aa38.22■■■■□ 3.71
SLC35C1-202ENST00000442528 CHIC1Q5VXU3 224 aa38.22■■■■□ 3.71
SLC35C1-202ENST00000442528 WDR97A6NE52 1622 aa38.13■■■■□ 3.7
SLC35C1-202ENST00000442528 ABCA10Q8WWZ4 1543 aa38.11■■■■□ 3.69
SLC35C1-202ENST00000442528 ZNF608Q9ULD9 1512 aaPredicted RBP38.03■■■■□ 3.68
SLC35C1-202ENST00000442528 EIF4G3O43432 1585 aaKnown RBP37.96■■■■□ 3.67
SLC35C1-202ENST00000442528 TDRD9Q8NDG6 1382 aaKnown RBP37.93■■■■□ 3.66
SLC35C1-202ENST00000442528 ABCA5Q8WWZ7 1642 aa37.91■■■■□ 3.66
SLC35C1-202ENST00000442528 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.665e-6■■■■□ 24
SLC35C1-202ENST00000442528 GAPVD1Q14C86 1478 aa37.84■■■■□ 3.65
SLC35C1-202ENST00000442528 KIF27Q86VH2 1401 aa37.82■■■■□ 3.65
SLC35C1-202ENST00000442528 PBRM1Q86U86 1689 aa37.77■■■■□ 3.64
SLC35C1-202ENST00000442528 GRIN2BQ13224 1484 aa37.73■■■■□ 3.63
SLC35C1-202ENST00000442528 RUSC2Q8N2Y8 1516 aa37.68■■■■□ 3.62
SLC35C1-202ENST00000442528 ERICH3Q5RHP9 1530 aa37.67■■■■□ 3.62
SLC35C1-202ENST00000442528 EEA1Q15075 1411 aa37.59■■■■□ 3.61
SLC35C1-202ENST00000442528 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
SLC35C1-202ENST00000442528 MAGI1Q96QZ7 1491 aaPredicted RBP37.58■■■■□ 3.61
SLC35C1-202ENST00000442528 IGF1RP08069 1367 aa37.55■■■■□ 3.6
SLC35C1-202ENST00000442528 ADAMTS12P58397 1594 aa37.49■■■■□ 3.59
SLC35C1-202ENST00000442528 CUL7Q14999 1698 aa37.49■■■■□ 3.59
SLC35C1-202ENST00000442528 FHAD1B1AJZ9 1412 aa37.42■■■■□ 3.58
SLC35C1-202ENST00000442528 SYNJ2O15056 1496 aa37.42■■■■□ 3.58
SLC35C1-202ENST00000442528 FAM9AQ8IZU1 332 aaPredicted RBP37.39■■■■□ 3.58
SLC35C1-202ENST00000442528 CSRNP3Q8WYN3 585 aa37.38■■■■□ 3.57
SLC35C1-202ENST00000442528 CARMIL1Q5VZK9 1371 aa37.35■■■■□ 3.57
SLC35C1-202ENST00000442528 CHD1O14646 1710 aa37.35■■■■□ 3.57
SLC35C1-202ENST00000442528 CHMP7Q8WUX9 453 aaPredicted RBP37.29■■■■□ 3.56
SLC35C1-202ENST00000442528 PRXQ9BXM0 1461 aa37.29■■■■□ 3.56
SLC35C1-202ENST00000442528 FBLN2P98095 1184 aa37.27■■■■□ 3.56
SLC35C1-202ENST00000442528 GRIN2AQ12879 1464 aa37.27■■■■□ 3.56
SLC35C1-202ENST00000442528 RAPGEF2Q9Y4G8 1499 aa37.23■■■■□ 3.55
SLC35C1-202ENST00000442528 KIF21BO75037 1637 aa37.17■■■■□ 3.54
SLC35C1-202ENST00000442528 NUP160Q12769 1436 aa37.06■■■■□ 3.52
SLC35C1-202ENST00000442528 CEP170Q5SW79 1584 aa37.06■■■■□ 3.52
SLC35C1-202ENST00000442528 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
SLC35C1-202ENST00000442528 GOLGA3Q08378 1498 aa36.98■■■■□ 3.51
SLC35C1-202ENST00000442528 CLASP1Q7Z460 1538 aa36.93■■■■□ 3.5
SLC35C1-202ENST00000442528 CTTNBP2Q8WZ74 1663 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms