RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 NISCHQ9Y2I1 1504 aa57.01■■■■■ 6.72
HOMER3-203ENST00000433218 CCDC180Q9P1Z9 1646 aa51.18■■■■■ 5.78
HOMER3-203ENST00000433218 ABCC9O60706 1549 aa50.86■■■■■ 5.73
HOMER3-203ENST00000433218 RB1CC1Q8TDY2 1594 aa48.46■■■■■ 5.35
HOMER3-203ENST00000433218 NACADO15069 1562 aa48.14■■■■■ 5.3
HOMER3-203ENST00000433218 UNC13AQ9UPW8 1703 aa47.79■■■■■ 5.24
HOMER3-203ENST00000433218 DCAF8L2P0C7V8 631 aa47.77■■■■■ 5.24
HOMER3-203ENST00000433218 MYO15BQ96JP2 1530 aa47.5■■■■■ 5.19
HOMER3-203ENST00000433218 DNAJC5BQ9UF47 199 aa47.44■■■■■ 5.18
HOMER3-203ENST00000433218 ZCCHC6Q5VYS8 1495 aaKnown RBP47.37■■■■■ 5.17
HOMER3-203ENST00000433218 PABPN1Q86U42 306 aaKnown RBP eCLIP47.28■■■■■ 5.16
HOMER3-203ENST00000433218 BICRAQ9NZM4 1560 aa47.23■■■■■ 5.15
HOMER3-203ENST00000433218 DCAF1Q9Y4B6 1507 aa47.03■■■■■ 5.12
HOMER3-203ENST00000433218 SCRIBQ14160 1630 aa46.73■■■■■ 5.07
HOMER3-203ENST00000433218 SHROOM4Q9ULL8 1493 aa46.32■■■■■ 5.01
HOMER3-203ENST00000433218 CC2D2AQ9P2K1 1620 aa46.03■■■■■ 4.96
HOMER3-203ENST00000433218 EIF4G1Q04637 1599 aaKnown RBP45.96■■■■■ 4.95
HOMER3-203ENST00000433218 CECR2Q9BXF3 1484 aa45.71■■■■■ 4.91
HOMER3-203ENST00000433218 SMARCA4P51532 1647 aa44.55■■■■■ 4.72
HOMER3-203ENST00000433218 NCAPD3P42695 1498 aa44.38■■■■■ 4.69
HOMER3-203ENST00000433218 ATAD2BQ9ULI0 1458 aa44.38■■■■■ 4.69
HOMER3-203ENST00000433218 SMARCA2P51531 1590 aa44.24■■■■■ 4.67
HOMER3-203ENST00000433218 HMGXB3Q12766 1538 aa44.22■■■■■ 4.67
HOMER3-203ENST00000433218 BAZ1AQ9NRL2 1556 aaPredicted RBP44.21■■■■■ 4.67
HOMER3-203ENST00000433218 MROH2BQ7Z745 1585 aa44.03■■■■■ 4.64
HOMER3-203ENST00000433218 PEG3Q9GZU2 1588 aa44.03■■■■■ 4.64
HOMER3-203ENST00000433218 BAZ1BQ9UIG0 1483 aaKnown RBP43.96■■■■■ 4.63
HOMER3-203ENST00000433218 NESP48681 1621 aa43.85■■■■■ 4.61
HOMER3-203ENST00000433218 ERCC6Q03468 1493 aa43.78■■■■■ 4.6
HOMER3-203ENST00000433218 WIZO95785 1651 aa43.62■■■■■ 4.57
HOMER3-203ENST00000433218 CUX2O14529 1486 aa43.6■■■■■ 4.57
HOMER3-203ENST00000433218 KIF21AQ7Z4S6 1674 aa43.45■■■■■ 4.55
HOMER3-203ENST00000433218 LAMC3Q9Y6N6 1575 aa43.45■■■■■ 4.55
HOMER3-203ENST00000433218 THOC2Q8NI27 1593 aaKnown RBP43.44■■■■■ 4.55
HOMER3-203ENST00000433218 DNAJC5Q9H3Z4 198 aa43.15■■■■■ 4.5
HOMER3-203ENST00000433218 RSF1Q96T23 1441 aaPredicted RBP43.08■■■■■ 4.49
HOMER3-203ENST00000433218 PDS5BQ9NTI5 1447 aa43.01■■■■■ 4.48
HOMER3-203ENST00000433218 CADPSQ9ULU8 1353 aa43.01■■■■■ 4.48
HOMER3-203ENST00000433218 TOP2AP11388 1531 aaKnown RBP42.95■■■■■ 4.47
HOMER3-203ENST00000433218 MRC2Q9UBG0 1479 aa42.79■■■■■ 4.44
HOMER3-203ENST00000433218 WDR62O43379 1518 aa42.76■■■■■ 4.44
HOMER3-203ENST00000433218 CEP164Q9UPV0 1460 aa42.67■■■■■ 4.42
HOMER3-203ENST00000433218 CFTRP13569 1480 aa42.66■■■■■ 4.42
HOMER3-203ENST00000433218 FANCD2Q9BXW9 1451 aa42.65■■■■■ 4.42
HOMER3-203ENST00000433218 PRDM2Q13029 1718 aa42.62■■■■■ 4.41
HOMER3-203ENST00000433218 CCDC88BA6NC98 1476 aa42.4■■■■■ 4.38
HOMER3-203ENST00000433218 URB2Q14146 1524 aaKnown RBP42.39■■■■■ 4.38
HOMER3-203ENST00000433218 TOPBP1Q92547 1522 aa41.92■■■■■ 4.3
HOMER3-203ENST00000433218 ZNF608Q9ULD9 1512 aaPredicted RBP41.82■■■■■ 4.29
HOMER3-203ENST00000433218 DNMBPQ6XZF7 1577 aa41.81■■■■■ 4.28
HOMER3-203ENST00000433218 IFT140Q96RY7 1462 aa41.73■■■■■ 4.27
HOMER3-203ENST00000433218 EIF4G3O43432 1585 aaKnown RBP41.71■■■■■ 4.27
HOMER3-203ENST00000433218 TARBP1Q13395 1621 aaKnown RBP41.64■■■■■ 4.26
HOMER3-203ENST00000433218 ABCC8Q09428 1581 aa41.6■■■■■ 4.25
HOMER3-203ENST00000433218 POLA1P09884 1462 aaPredicted RBP41.51■■■■■ 4.24
HOMER3-203ENST00000433218 TRIM41Q8WV44 630 aa41.47■■■■■ 4.23
HOMER3-203ENST00000433218 CHD1O14646 1710 aa41.44■■■■■ 4.22
HOMER3-203ENST00000433218 OSCARQ8IYS5 282 aa41.44■■■■■ 4.22
HOMER3-203ENST00000433218 AQRO60306 1485 aaKnown RBP eCLIP41.39■■■■■ 4.22
HOMER3-203ENST00000433218 RAD54L2Q9Y4B4 1467 aa41.38■■■■■ 4.21
HOMER3-203ENST00000433218 CUX1P39880 1505 aa41.37■■■■■ 4.21
HOMER3-203ENST00000433218 RIMBP3CA6NJZ7 1639 aa41.31■■■■■ 4.2
HOMER3-203ENST00000433218 RIMBP3BA6NNM3 1639 aa41.31■■■■■ 4.2
HOMER3-203ENST00000433218 RIMBP3Q9UFD9 1639 aa41.31■■■■■ 4.2
HOMER3-203ENST00000433218 FGD5Q6ZNL6 1462 aa41.3■■■■■ 4.2
HOMER3-203ENST00000433218 SUPT5HO00267 1087 aaKnown RBP41.26■■■■■ 4.19
HOMER3-203ENST00000433218 WDR97A6NE52 1622 aa41.22■■■■■ 4.19
HOMER3-203ENST00000433218 SOGA1O94964 1423 aa41.16■■■■■ 4.18
HOMER3-203ENST00000433218 ARHGEF11O15085 1522 aa41.11■■■■■ 4.17
HOMER3-203ENST00000433218 TDRD9Q8NDG6 1382 aaKnown RBP41.11■■■■■ 4.17
HOMER3-203ENST00000433218 SNAPC4Q5SXM2 1469 aa41.03■■■■■ 4.16
HOMER3-203ENST00000433218 PBRM1Q86U86 1689 aa41.02■■■■■ 4.16
HOMER3-203ENST00000433218 FBLN2P98095 1184 aa40.89■■■■■ 4.14
HOMER3-203ENST00000433218 ABCA5Q8WWZ7 1642 aa40.88■■■■■ 4.13
HOMER3-203ENST00000433218 BIVM-ERCC5R4GMW8 1640 aa40.82■■■■■ 4.13
HOMER3-203ENST00000433218 GRIN2BQ13224 1484 aa40.82■■■■■ 4.13
HOMER3-203ENST00000433218 MAGI1Q96QZ7 1491 aaPredicted RBP40.82■■■■■ 4.13
HOMER3-203ENST00000433218 SYNJ1O43426 1573 aa40.81■■■■■ 4.12
HOMER3-203ENST00000433218 CLASP1Q7Z460 1538 aa40.81■■■■■ 4.12
HOMER3-203ENST00000433218 ABCA10Q8WWZ4 1543 aa40.78■■■■■ 4.12
HOMER3-203ENST00000433218 ARAP1Q96P48 1450 aa40.76■■■■■ 4.12
HOMER3-203ENST00000433218 GAPVD1Q14C86 1478 aa40.74■■■■■ 4.11
HOMER3-203ENST00000433218 TOP2BQ02880 1626 aa40.74■■■■■ 4.11
HOMER3-203ENST00000433218 SYNJ2O15056 1496 aa40.69■■■■■ 4.1
HOMER3-203ENST00000433218 WRNQ14191 1432 aaPredicted RBP eCLIP40.6■■■■■ 4.09
HOMER3-203ENST00000433218 CYB5RLQ6IPT4 315 aa40.56■■■■■ 4.08
HOMER3-203ENST00000433218 CHMP7Q8WUX9 453 aaPredicted RBP40.56■■■■■ 4.08
HOMER3-203ENST00000433218 ADAMTS12P58397 1594 aa40.55■■■■■ 4.08
HOMER3-203ENST00000433218 GRIN2AQ12879 1464 aa40.38■■■■■ 4.05
HOMER3-203ENST00000433218 CEP170Q5SW79 1584 aa40.37■■■■■ 4.05
HOMER3-203ENST00000433218 ERCC6L2Q5T890 1561 aa40.31■■■■■ 4.04
HOMER3-203ENST00000433218 ERICH3Q5RHP9 1530 aa40.26■■■■■ 4.04
HOMER3-203ENST00000433218 NUP160Q12769 1436 aa40.21■■■■■ 4.03
HOMER3-203ENST00000433218 FHAD1B1AJZ9 1412 aa40.18■■■■■ 4.02
HOMER3-203ENST00000433218 SHROOM2Q13796 1616 aa40.16■■■■■ 4.02
HOMER3-203ENST00000433218 RUSC2Q8N2Y8 1516 aa39.99■■■■□ 3.99
HOMER3-203ENST00000433218 TRHP20396 242 aaPredicted RBP39.99■■■■□ 3.99
HOMER3-203ENST00000433218 CUL7Q14999 1698 aa39.83■■■■□ 3.97
HOMER3-203ENST00000433218 PRG4Q92954 1404 aaPredicted RBP39.75■■■■□ 3.95
HOMER3-203ENST00000433218 KIF27Q86VH2 1401 aa39.73■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms