Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.54■■■□□ 2.64
CDHR1Q96JP9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CDHR1Q96JP9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDHR1Q96JP9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.5■■■□□ 2.63
CDHR1Q96JP9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDHR1Q96JP9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDHR1Q96JP9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.48■■■□□ 2.63
CDHR1Q96JP9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDHR1Q96JP9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDHR1Q96JP9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.46■■■□□ 2.63
CDHR1Q96JP9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.45■■■□□ 2.63
CDHR1Q96JP9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDHR1Q96JP9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDHR1Q96JP9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.43■■■□□ 2.62
CDHR1Q96JP9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.42■■■□□ 2.62
CDHR1Q96JP9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDHR1Q96JP9 AL133380.1-201ENST00000506013 324 ntBASIC31.42■■■□□ 2.62
CDHR1Q96JP9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.39■■■□□ 2.62
CDHR1Q96JP9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CDHR1Q96JP9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
CDHR1Q96JP9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.35■■■□□ 2.61
CDHR1Q96JP9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDHR1Q96JP9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.35■■■□□ 2.61
CDHR1Q96JP9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.34■■■□□ 2.61
CDHR1Q96JP9 SUZ12P1-203ENST00000578195 985 ntBASIC31.34■■■□□ 2.61
CDHR1Q96JP9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDHR1Q96JP9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.33■■■□□ 2.61
CDHR1Q96JP9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDHR1Q96JP9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.32■■■□□ 2.6
CDHR1Q96JP9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDHR1Q96JP9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDHR1Q96JP9 CAHM-201ENST00000604200 896 ntBASIC31.27■■■□□ 2.6
CDHR1Q96JP9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDHR1Q96JP9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDHR1Q96JP9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
CDHR1Q96JP9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDHR1Q96JP9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CDHR1Q96JP9 AL391121.1-201ENST00000607967 1349 ntBASIC31.24■■■□□ 2.59
CDHR1Q96JP9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDHR1Q96JP9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
CDHR1Q96JP9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDHR1Q96JP9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.19■■■□□ 2.58
CDHR1Q96JP9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDHR1Q96JP9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDHR1Q96JP9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.16■■■□□ 2.58
CDHR1Q96JP9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDHR1Q96JP9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
CDHR1Q96JP9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDHR1Q96JP9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDHR1Q96JP9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDHR1Q96JP9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDHR1Q96JP9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CDHR1Q96JP9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDHR1Q96JP9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.1■■■□□ 2.57
CDHR1Q96JP9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
CDHR1Q96JP9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDHR1Q96JP9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.08■■■□□ 2.57
CDHR1Q96JP9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.07■■■□□ 2.56
CDHR1Q96JP9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.07■■■□□ 2.56
CDHR1Q96JP9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDHR1Q96JP9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CDHR1Q96JP9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDHR1Q96JP9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDHR1Q96JP9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDHR1Q96JP9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CDHR1Q96JP9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDHR1Q96JP9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CDHR1Q96JP9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDHR1Q96JP9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDHR1Q96JP9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDHR1Q96JP9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31■■■□□ 2.55
CDHR1Q96JP9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDHR1Q96JP9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.98■■■□□ 2.55
CDHR1Q96JP9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.98■■■□□ 2.55
CDHR1Q96JP9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDHR1Q96JP9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDHR1Q96JP9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDHR1Q96JP9 AP006261.1-201ENST00000584783 668 ntBASIC30.93■■■□□ 2.54
CDHR1Q96JP9 WASH5P-204ENST00000632292 975 ntBASIC30.93■■■□□ 2.54
CDHR1Q96JP9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDHR1Q96JP9 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.92■■■□□ 2.54
CDHR1Q96JP9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDHR1Q96JP9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDHR1Q96JP9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDHR1Q96JP9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.88■■■□□ 2.53
CDHR1Q96JP9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CDHR1Q96JP9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
CDHR1Q96JP9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDHR1Q96JP9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDHR1Q96JP9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDHR1Q96JP9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.83■■■□□ 2.53
CDHR1Q96JP9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.82■■■□□ 2.52
CDHR1Q96JP9 RPS2P35-201ENST00000443417 897 ntBASIC30.82■■■□□ 2.52
CDHR1Q96JP9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDHR1Q96JP9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CDHR1Q96JP9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.8■■■□□ 2.52
CDHR1Q96JP9 AL162393.1-201ENST00000437852 946 ntBASIC30.79■■■□□ 2.52
CDHR1Q96JP9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.79■■■□□ 2.52
CDHR1Q96JP9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CDHR1Q96JP9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms