Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CDRT4Q8N9R6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.88■■□□□ 1.73
CDRT4Q8N9R6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDRT4Q8N9R6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CDRT4Q8N9R6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.84■■□□□ 1.73
CDRT4Q8N9R6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CDRT4Q8N9R6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.84■■□□□ 1.73
CDRT4Q8N9R6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CDRT4Q8N9R6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.83■■□□□ 1.73
CDRT4Q8N9R6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDRT4Q8N9R6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.83■■□□□ 1.72
CDRT4Q8N9R6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDRT4Q8N9R6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CDRT4Q8N9R6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.8■■□□□ 1.72
CDRT4Q8N9R6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.8■■□□□ 1.72
CDRT4Q8N9R6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDRT4Q8N9R6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDRT4Q8N9R6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDRT4Q8N9R6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.78■■□□□ 1.72
CDRT4Q8N9R6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDRT4Q8N9R6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDRT4Q8N9R6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDRT4Q8N9R6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDRT4Q8N9R6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.75■■□□□ 1.71
CDRT4Q8N9R6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDRT4Q8N9R6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDRT4Q8N9R6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDRT4Q8N9R6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CDRT4Q8N9R6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDRT4Q8N9R6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.69■■□□□ 1.7
CDRT4Q8N9R6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CDRT4Q8N9R6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CDRT4Q8N9R6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDRT4Q8N9R6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.67■■□□□ 1.7
CDRT4Q8N9R6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.67■■□□□ 1.7
CDRT4Q8N9R6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDRT4Q8N9R6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CDRT4Q8N9R6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.66■■□□□ 1.7
CDRT4Q8N9R6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDRT4Q8N9R6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CDRT4Q8N9R6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDRT4Q8N9R6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDRT4Q8N9R6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDRT4Q8N9R6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.61■■□□□ 1.69
CDRT4Q8N9R6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDRT4Q8N9R6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDRT4Q8N9R6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDRT4Q8N9R6 AC120057.4-201ENST00000624722 1615 ntBASIC25.6■■□□□ 1.69
CDRT4Q8N9R6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.6■■□□□ 1.69
CDRT4Q8N9R6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDRT4Q8N9R6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.59■■□□□ 1.69
CDRT4Q8N9R6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDRT4Q8N9R6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.59■■□□□ 1.69
CDRT4Q8N9R6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDRT4Q8N9R6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.57■■□□□ 1.68
CDRT4Q8N9R6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CDRT4Q8N9R6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDRT4Q8N9R6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDRT4Q8N9R6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDRT4Q8N9R6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDRT4Q8N9R6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.55■■□□□ 1.68
CDRT4Q8N9R6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDRT4Q8N9R6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.52■■□□□ 1.68
CDRT4Q8N9R6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDRT4Q8N9R6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CDRT4Q8N9R6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CDRT4Q8N9R6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CDRT4Q8N9R6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.5■■□□□ 1.67
CDRT4Q8N9R6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDRT4Q8N9R6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.49■■□□□ 1.67
CDRT4Q8N9R6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.47■■□□□ 1.67
CDRT4Q8N9R6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDRT4Q8N9R6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.46■■□□□ 1.67
CDRT4Q8N9R6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CDRT4Q8N9R6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDRT4Q8N9R6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.44■■□□□ 1.66
CDRT4Q8N9R6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDRT4Q8N9R6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.43■■□□□ 1.66
CDRT4Q8N9R6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CDRT4Q8N9R6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDRT4Q8N9R6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDRT4Q8N9R6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.39■■□□□ 1.66
CDRT4Q8N9R6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.39■■□□□ 1.65
CDRT4Q8N9R6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.39■■□□□ 1.65
CDRT4Q8N9R6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDRT4Q8N9R6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDRT4Q8N9R6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.36■■□□□ 1.65
CDRT4Q8N9R6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDRT4Q8N9R6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.35■■□□□ 1.65
CDRT4Q8N9R6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDRT4Q8N9R6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDRT4Q8N9R6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.32■■□□□ 1.64
CDRT4Q8N9R6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDRT4Q8N9R6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDRT4Q8N9R6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDRT4Q8N9R6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDRT4Q8N9R6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDRT4Q8N9R6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
CDRT4Q8N9R6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDRT4Q8N9R6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms