Protein–RNA interactions for Protein: Q8IXH7

NELFCD, Negative elongation factor C/D, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCDQ8IXH7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
NELFCDQ8IXH7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NELFCDQ8IXH7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.73■■■□□ 2.51
NELFCDQ8IXH7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NELFCDQ8IXH7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
NELFCDQ8IXH7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
NELFCDQ8IXH7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.72■■■□□ 2.51
NELFCDQ8IXH7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.71■■■□□ 2.51
NELFCDQ8IXH7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.7■■■□□ 2.51
NELFCDQ8IXH7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.69■■■□□ 2.5
NELFCDQ8IXH7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NELFCDQ8IXH7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.66■■■□□ 2.5
NELFCDQ8IXH7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NELFCDQ8IXH7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.61■■■□□ 2.49
NELFCDQ8IXH7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.59■■■□□ 2.49
NELFCDQ8IXH7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
NELFCDQ8IXH7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NELFCDQ8IXH7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.57■■■□□ 2.48
NELFCDQ8IXH7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NELFCDQ8IXH7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NELFCDQ8IXH7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
NELFCDQ8IXH7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NELFCDQ8IXH7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
NELFCDQ8IXH7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
NELFCDQ8IXH7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.54■■■□□ 2.48
NELFCDQ8IXH7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NELFCDQ8IXH7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.53■■■□□ 2.48
NELFCDQ8IXH7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.53■■■□□ 2.48
NELFCDQ8IXH7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
NELFCDQ8IXH7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NELFCDQ8IXH7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NELFCDQ8IXH7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NELFCDQ8IXH7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NELFCDQ8IXH7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
NELFCDQ8IXH7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NELFCDQ8IXH7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
NELFCDQ8IXH7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.47■■■□□ 2.47
NELFCDQ8IXH7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NELFCDQ8IXH7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NELFCDQ8IXH7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.43■■■□□ 2.46
NELFCDQ8IXH7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
NELFCDQ8IXH7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.39■■■□□ 2.46
NELFCDQ8IXH7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
NELFCDQ8IXH7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.38■■■□□ 2.45
NELFCDQ8IXH7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NELFCDQ8IXH7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NELFCDQ8IXH7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NELFCDQ8IXH7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NELFCDQ8IXH7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.36■■■□□ 2.45
NELFCDQ8IXH7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
NELFCDQ8IXH7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
NELFCDQ8IXH7 AC120057.4-201ENST00000624722 1615 ntBASIC30.35■■■□□ 2.45
NELFCDQ8IXH7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.35■■■□□ 2.45
NELFCDQ8IXH7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NELFCDQ8IXH7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.34■■■□□ 2.45
NELFCDQ8IXH7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NELFCDQ8IXH7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NELFCDQ8IXH7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
NELFCDQ8IXH7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NELFCDQ8IXH7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NELFCDQ8IXH7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.31■■■□□ 2.44
NELFCDQ8IXH7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NELFCDQ8IXH7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NELFCDQ8IXH7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.29■■■□□ 2.44
NELFCDQ8IXH7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
NELFCDQ8IXH7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NELFCDQ8IXH7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.29■■■□□ 2.44
NELFCDQ8IXH7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.28■■■□□ 2.44
NELFCDQ8IXH7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NELFCDQ8IXH7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.27■■■□□ 2.44
NELFCDQ8IXH7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.26■■■□□ 2.43
NELFCDQ8IXH7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
NELFCDQ8IXH7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NELFCDQ8IXH7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NELFCDQ8IXH7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.22■■■□□ 2.43
NELFCDQ8IXH7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
NELFCDQ8IXH7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NELFCDQ8IXH7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NELFCDQ8IXH7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.18■■■□□ 2.42
NELFCDQ8IXH7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NELFCDQ8IXH7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.17■■■□□ 2.42
NELFCDQ8IXH7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
NELFCDQ8IXH7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.16■■■□□ 2.42
NELFCDQ8IXH7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.16■■■□□ 2.42
NELFCDQ8IXH7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NELFCDQ8IXH7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
NELFCDQ8IXH7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NELFCDQ8IXH7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
NELFCDQ8IXH7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NELFCDQ8IXH7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NELFCDQ8IXH7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.13■■■□□ 2.41
NELFCDQ8IXH7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
NELFCDQ8IXH7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NELFCDQ8IXH7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NELFCDQ8IXH7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.08■■■□□ 2.41
NELFCDQ8IXH7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.03■■■□□ 2.4
NELFCDQ8IXH7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
NELFCDQ8IXH7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.01■■■□□ 2.4
NELFCDQ8IXH7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NELFCDQ8IXH7 RARRES2P7-201ENST00000567349 469 ntBASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms