Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COLCA1Q6ZS62 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.07■■□□□ 1.44
COLCA1Q6ZS62 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.07■■□□□ 1.44
COLCA1Q6ZS62 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.06■■□□□ 1.44
COLCA1Q6ZS62 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
COLCA1Q6ZS62 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COLCA1Q6ZS62 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.05■■□□□ 1.44
COLCA1Q6ZS62 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COLCA1Q6ZS62 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COLCA1Q6ZS62 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
COLCA1Q6ZS62 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.03■■□□□ 1.44
COLCA1Q6ZS62 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
COLCA1Q6ZS62 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COLCA1Q6ZS62 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.02■■□□□ 1.44
COLCA1Q6ZS62 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.01■■□□□ 1.43
COLCA1Q6ZS62 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
COLCA1Q6ZS62 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COLCA1Q6ZS62 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.99■■□□□ 1.43
COLCA1Q6ZS62 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COLCA1Q6ZS62 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COLCA1Q6ZS62 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.97■■□□□ 1.43
COLCA1Q6ZS62 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COLCA1Q6ZS62 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COLCA1Q6ZS62 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
COLCA1Q6ZS62 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.93■■□□□ 1.42
COLCA1Q6ZS62 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COLCA1Q6ZS62 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
COLCA1Q6ZS62 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COLCA1Q6ZS62 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COLCA1Q6ZS62 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COLCA1Q6ZS62 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COLCA1Q6ZS62 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.88■■□□□ 1.41
COLCA1Q6ZS62 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COLCA1Q6ZS62 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
COLCA1Q6ZS62 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COLCA1Q6ZS62 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COLCA1Q6ZS62 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COLCA1Q6ZS62 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COLCA1Q6ZS62 AC120057.4-201ENST00000624722 1615 ntBASIC23.83■■□□□ 1.41
COLCA1Q6ZS62 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COLCA1Q6ZS62 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COLCA1Q6ZS62 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COLCA1Q6ZS62 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COLCA1Q6ZS62 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.8■■□□□ 1.4
COLCA1Q6ZS62 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.8■■□□□ 1.4
COLCA1Q6ZS62 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COLCA1Q6ZS62 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.79■■□□□ 1.4
COLCA1Q6ZS62 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COLCA1Q6ZS62 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COLCA1Q6ZS62 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COLCA1Q6ZS62 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COLCA1Q6ZS62 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COLCA1Q6ZS62 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.74■■□□□ 1.39
COLCA1Q6ZS62 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COLCA1Q6ZS62 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
COLCA1Q6ZS62 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COLCA1Q6ZS62 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COLCA1Q6ZS62 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COLCA1Q6ZS62 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COLCA1Q6ZS62 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.69■■□□□ 1.38
COLCA1Q6ZS62 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COLCA1Q6ZS62 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
COLCA1Q6ZS62 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COLCA1Q6ZS62 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.68■■□□□ 1.38
COLCA1Q6ZS62 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.68■■□□□ 1.38
COLCA1Q6ZS62 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.67■■□□□ 1.38
COLCA1Q6ZS62 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COLCA1Q6ZS62 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
COLCA1Q6ZS62 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COLCA1Q6ZS62 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.62■■□□□ 1.37
COLCA1Q6ZS62 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COLCA1Q6ZS62 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.61■■□□□ 1.37
COLCA1Q6ZS62 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.6■■□□□ 1.37
COLCA1Q6ZS62 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.6■■□□□ 1.37
COLCA1Q6ZS62 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COLCA1Q6ZS62 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COLCA1Q6ZS62 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COLCA1Q6ZS62 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COLCA1Q6ZS62 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.56■■□□□ 1.36
COLCA1Q6ZS62 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
COLCA1Q6ZS62 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COLCA1Q6ZS62 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COLCA1Q6ZS62 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 AL133380.1-201ENST00000506013 324 ntBASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.51■■□□□ 1.35
COLCA1Q6ZS62 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms