Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.35■■■□□ 2.61
LGR5O75473 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LGR5O75473 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LGR5O75473 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.33■■■□□ 2.61
LGR5O75473 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.32■■■□□ 2.6
LGR5O75473 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.31■■■□□ 2.6
LGR5O75473 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LGR5O75473 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LGR5O75473 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LGR5O75473 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LGR5O75473 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.27■■■□□ 2.6
LGR5O75473 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
LGR5O75473 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LGR5O75473 RPS2P35-201ENST00000443417 897 ntBASIC31.2■■■□□ 2.59
LGR5O75473 AL133380.1-201ENST00000506013 324 ntBASIC31.2■■■□□ 2.59
LGR5O75473 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.2■■■□□ 2.59
LGR5O75473 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LGR5O75473 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LGR5O75473 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LGR5O75473 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
LGR5O75473 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
LGR5O75473 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
LGR5O75473 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.17■■■□□ 2.58
LGR5O75473 CAHM-201ENST00000604200 896 ntBASIC31.15■■■□□ 2.58
LGR5O75473 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LGR5O75473 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.13■■■□□ 2.57
LGR5O75473 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.12■■■□□ 2.57
LGR5O75473 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LGR5O75473 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LGR5O75473 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
LGR5O75473 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.07■■■□□ 2.56
LGR5O75473 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LGR5O75473 AL391121.1-201ENST00000607967 1349 ntBASIC31.04■■■□□ 2.56
LGR5O75473 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LGR5O75473 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LGR5O75473 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31■■■□□ 2.55
LGR5O75473 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31■■■□□ 2.55
LGR5O75473 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LGR5O75473 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LGR5O75473 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LGR5O75473 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LGR5O75473 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
LGR5O75473 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
LGR5O75473 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
LGR5O75473 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.91■■■□□ 2.54
LGR5O75473 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
LGR5O75473 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
LGR5O75473 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LGR5O75473 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
LGR5O75473 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
LGR5O75473 AL162393.1-201ENST00000437852 946 ntBASIC30.85■■■□□ 2.53
LGR5O75473 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
LGR5O75473 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.84■■■□□ 2.53
LGR5O75473 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.83■■■□□ 2.53
LGR5O75473 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.82■■■□□ 2.52
LGR5O75473 AP006261.1-201ENST00000584783 668 ntBASIC30.82■■■□□ 2.52
LGR5O75473 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LGR5O75473 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.8■■■□□ 2.52
LGR5O75473 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.78■■■□□ 2.52
LGR5O75473 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LGR5O75473 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
LGR5O75473 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LGR5O75473 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LGR5O75473 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
LGR5O75473 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.75■■■□□ 2.51
LGR5O75473 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
LGR5O75473 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.74■■■□□ 2.51
LGR5O75473 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LGR5O75473 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.71■■■□□ 2.51
LGR5O75473 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LGR5O75473 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LGR5O75473 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
LGR5O75473 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
LGR5O75473 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
LGR5O75473 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.69■■■□□ 2.5
LGR5O75473 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LGR5O75473 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.68■■■□□ 2.5
LGR5O75473 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LGR5O75473 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LGR5O75473 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
LGR5O75473 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LGR5O75473 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LGR5O75473 WASH5P-204ENST00000632292 975 ntBASIC30.65■■■□□ 2.5
LGR5O75473 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LGR5O75473 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LGR5O75473 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LGR5O75473 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.63■■■□□ 2.49
LGR5O75473 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
LGR5O75473 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.63■■■□□ 2.49
LGR5O75473 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LGR5O75473 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LGR5O75473 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LGR5O75473 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.61■■■□□ 2.49
LGR5O75473 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
LGR5O75473 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.58■■■□□ 2.49
LGR5O75473 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
LGR5O75473 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
LGR5O75473 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.57■■■□□ 2.48
LGR5O75473 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LGR5O75473 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms