Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGA12O60330 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDHGA12O60330 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDHGA12O60330 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGA12O60330 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHGA12O60330 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.64■■■□□ 2.02
PCDHGA12O60330 AP006261.1-201ENST00000584783 668 ntBASIC27.64■■■□□ 2.02
PCDHGA12O60330 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHGA12O60330 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHGA12O60330 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
PCDHGA12O60330 AL391121.1-201ENST00000607967 1349 ntBASIC27.63■■■□□ 2.01
PCDHGA12O60330 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDHGA12O60330 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDHGA12O60330 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGA12O60330 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGA12O60330 AL162393.1-201ENST00000437852 946 ntBASIC27.6■■■□□ 2.01
PCDHGA12O60330 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
PCDHGA12O60330 AL133380.1-201ENST00000506013 324 ntBASIC27.58■■■□□ 2.01
PCDHGA12O60330 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
PCDHGA12O60330 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.57■■■□□ 2
PCDHGA12O60330 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.56■■■□□ 2
PCDHGA12O60330 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.54■■■□□ 2
PCDHGA12O60330 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.5■■□□□ 1.99
PCDHGA12O60330 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHGA12O60330 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHGA12O60330 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.49■■□□□ 1.99
PCDHGA12O60330 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHGA12O60330 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGA12O60330 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.47■■□□□ 1.99
PCDHGA12O60330 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.46■■□□□ 1.99
PCDHGA12O60330 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGA12O60330 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHGA12O60330 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
PCDHGA12O60330 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.43■■□□□ 1.98
PCDHGA12O60330 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHGA12O60330 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
PCDHGA12O60330 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDHGA12O60330 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.39■■□□□ 1.98
PCDHGA12O60330 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
PCDHGA12O60330 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
PCDHGA12O60330 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHGA12O60330 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.38■■□□□ 1.97
PCDHGA12O60330 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.36■■□□□ 1.97
PCDHGA12O60330 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGA12O60330 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGA12O60330 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGA12O60330 MIR3665-201ENST00000578708 105 ntBASIC27.36■■□□□ 1.97
PCDHGA12O60330 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.35■■□□□ 1.97
PCDHGA12O60330 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGA12O60330 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHGA12O60330 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHGA12O60330 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGA12O60330 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
PCDHGA12O60330 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.27■■□□□ 1.96
PCDHGA12O60330 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PCDHGA12O60330 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGA12O60330 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGA12O60330 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGA12O60330 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.21■■□□□ 1.95
PCDHGA12O60330 AC087741.3-201ENST00000624270 1347 ntBASIC27.2■■□□□ 1.95
PCDHGA12O60330 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA12O60330 ABHD17AP4-201ENST00000411545 909 ntBASIC27.19■■□□□ 1.94
PCDHGA12O60330 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA12O60330 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA12O60330 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA12O60330 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGA12O60330 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDHGA12O60330 DUX4L28-201ENST00000623687 678 ntBASIC27.18■■□□□ 1.94
PCDHGA12O60330 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGA12O60330 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHGA12O60330 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGA12O60330 MIR762-201ENST00000390236 83 ntBASIC27.15■■□□□ 1.94
PCDHGA12O60330 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDHGA12O60330 MIR7108-201ENST00000614319 87 ntBASIC27.15■■□□□ 1.94
PCDHGA12O60330 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGA12O60330 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHGA12O60330 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHGA12O60330 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.14■■□□□ 1.94
PCDHGA12O60330 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.14■■□□□ 1.94
PCDHGA12O60330 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHGA12O60330 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGA12O60330 AC044849.2-201ENST00000606596 710 ntBASIC27.12■■□□□ 1.93
PCDHGA12O60330 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA12O60330 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA12O60330 AC005559.1-201ENST00000589661 871 ntBASIC27.1■■□□□ 1.93
PCDHGA12O60330 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHGA12O60330 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.09■■□□□ 1.93
PCDHGA12O60330 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA12O60330 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
PCDHGA12O60330 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA12O60330 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA12O60330 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
PCDHGA12O60330 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA12O60330 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHGA12O60330 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
PCDHGA12O60330 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.01■■□□□ 1.91
PCDHGA12O60330 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PCDHGA12O60330 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.01■■□□□ 1.91
PCDHGA12O60330 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.01■■□□□ 1.91
PCDHGA12O60330 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms