Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
PCDHGA12O60330 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.62■■■□□ 2.97
PCDHGA12O60330 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.11■■■□□ 2.89
PCDHGA12O60330 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCDHGA12O60330 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
PCDHGA12O60330 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
PCDHGA12O60330 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCDHGA12O60330 AL356512.1-201ENST00000607453 1739 ntBASIC32.31■■■□□ 2.76
PCDHGA12O60330 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
PCDHGA12O60330 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.02■■■□□ 2.72
PCDHGA12O60330 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.86■■■□□ 2.69
PCDHGA12O60330 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.83■■■□□ 2.69
PCDHGA12O60330 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCDHGA12O60330 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PCDHGA12O60330 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
PCDHGA12O60330 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCDHGA12O60330 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PCDHGA12O60330 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCDHGA12O60330 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHGA12O60330 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.2■■■□□ 2.58
PCDHGA12O60330 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PCDHGA12O60330 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PCDHGA12O60330 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
PCDHGA12O60330 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.06■■■□□ 2.56
PCDHGA12O60330 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
PCDHGA12O60330 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PCDHGA12O60330 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.9■■■□□ 2.54
PCDHGA12O60330 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PCDHGA12O60330 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.84■■■□□ 2.53
PCDHGA12O60330 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHGA12O60330 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
PCDHGA12O60330 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.78■■■□□ 2.52
PCDHGA12O60330 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
PCDHGA12O60330 AC006077.2-201ENST00000623591 457 ntBASIC30.6■■■□□ 2.49
PCDHGA12O60330 ZNRF2P1-201ENST00000441407 443 ntBASIC30.57■■■□□ 2.48
PCDHGA12O60330 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.54■■■□□ 2.48
PCDHGA12O60330 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.51■■■□□ 2.47
PCDHGA12O60330 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHGA12O60330 AC015813.7-201ENST00000623294 581 ntBASIC30.42■■■□□ 2.46
PCDHGA12O60330 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.4■■■□□ 2.46
PCDHGA12O60330 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHGA12O60330 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHGA12O60330 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.14■■■□□ 2.41
PCDHGA12O60330 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHGA12O60330 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHGA12O60330 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHGA12O60330 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDHGA12O60330 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDHGA12O60330 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHGA12O60330 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHGA12O60330 AP002365.1-201ENST00000603448 772 ntBASIC29.78■■■□□ 2.36
PCDHGA12O60330 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.76■■■□□ 2.36
PCDHGA12O60330 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHGA12O60330 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
PCDHGA12O60330 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHGA12O60330 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHGA12O60330 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.56■■■□□ 2.32
PCDHGA12O60330 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.55■■■□□ 2.32
PCDHGA12O60330 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHGA12O60330 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHGA12O60330 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHGA12O60330 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.51■■■□□ 2.31
PCDHGA12O60330 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHGA12O60330 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHGA12O60330 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
PCDHGA12O60330 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHGA12O60330 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.43■■■□□ 2.3
PCDHGA12O60330 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDHGA12O60330 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHGA12O60330 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.37■■■□□ 2.29
PCDHGA12O60330 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGA12O60330 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.32■■■□□ 2.28
PCDHGA12O60330 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.31■■■□□ 2.28
PCDHGA12O60330 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHGA12O60330 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGA12O60330 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
PCDHGA12O60330 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
PCDHGA12O60330 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCDHGA12O60330 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHGA12O60330 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.16■■■□□ 2.26
PCDHGA12O60330 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHGA12O60330 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PCDHGA12O60330 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.14■■■□□ 2.26
PCDHGA12O60330 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.14■■■□□ 2.26
PCDHGA12O60330 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
PCDHGA12O60330 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHGA12O60330 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHGA12O60330 DYNLL1-208ENST00000550178 581 ntBASIC29.1■■■□□ 2.25
PCDHGA12O60330 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHGA12O60330 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
PCDHGA12O60330 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHGA12O60330 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
PCDHGA12O60330 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGA12O60330 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.99■■■□□ 2.23
PCDHGA12O60330 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.97■■■□□ 2.23
PCDHGA12O60330 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PCDHGA12O60330 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.97■■■□□ 2.23
PCDHGA12O60330 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
PCDHGA12O60330 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.95■■■□□ 2.23
PCDHGA12O60330 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.95■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms