Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.64■■■□□ 2.02
TRBV5-4A0A0C4DH59 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRBV5-4A0A0C4DH59 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TRBV5-4A0A0C4DH59 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.62■■■□□ 2.01
TRBV5-4A0A0C4DH59 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
TRBV5-4A0A0C4DH59 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRBV5-4A0A0C4DH59 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRBV5-4A0A0C4DH59 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
TRBV5-4A0A0C4DH59 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
TRBV5-4A0A0C4DH59 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRBV5-4A0A0C4DH59 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.57■■■□□ 2
TRBV5-4A0A0C4DH59 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRBV5-4A0A0C4DH59 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TRBV5-4A0A0C4DH59 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.56■■■□□ 2
TRBV5-4A0A0C4DH59 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
TRBV5-4A0A0C4DH59 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.55■■■□□ 2
TRBV5-4A0A0C4DH59 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRBV5-4A0A0C4DH59 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.53■■■□□ 2
TRBV5-4A0A0C4DH59 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRBV5-4A0A0C4DH59 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.52■■■□□ 2
TRBV5-4A0A0C4DH59 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRBV5-4A0A0C4DH59 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.52■■■□□ 2
TRBV5-4A0A0C4DH59 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.52■■■□□ 2
TRBV5-4A0A0C4DH59 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.51■■□□□ 1.99
TRBV5-4A0A0C4DH59 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRBV5-4A0A0C4DH59 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.46■■□□□ 1.99
TRBV5-4A0A0C4DH59 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.46■■□□□ 1.99
TRBV5-4A0A0C4DH59 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRBV5-4A0A0C4DH59 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.45■■□□□ 1.98
TRBV5-4A0A0C4DH59 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRBV5-4A0A0C4DH59 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TRBV5-4A0A0C4DH59 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.42■■□□□ 1.98
TRBV5-4A0A0C4DH59 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
TRBV5-4A0A0C4DH59 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
TRBV5-4A0A0C4DH59 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.37■■□□□ 1.97
TRBV5-4A0A0C4DH59 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.36■■□□□ 1.97
TRBV5-4A0A0C4DH59 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.36■■□□□ 1.97
TRBV5-4A0A0C4DH59 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.36■■□□□ 1.97
TRBV5-4A0A0C4DH59 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.35■■□□□ 1.97
TRBV5-4A0A0C4DH59 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.35■■□□□ 1.97
TRBV5-4A0A0C4DH59 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TRBV5-4A0A0C4DH59 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.32■■□□□ 1.96
TRBV5-4A0A0C4DH59 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRBV5-4A0A0C4DH59 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRBV5-4A0A0C4DH59 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TRBV5-4A0A0C4DH59 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRBV5-4A0A0C4DH59 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRBV5-4A0A0C4DH59 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRBV5-4A0A0C4DH59 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.28■■□□□ 1.96
TRBV5-4A0A0C4DH59 AC120057.4-201ENST00000624722 1615 ntBASIC27.28■■□□□ 1.96
TRBV5-4A0A0C4DH59 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.28■■□□□ 1.96
TRBV5-4A0A0C4DH59 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.27■■□□□ 1.96
TRBV5-4A0A0C4DH59 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TRBV5-4A0A0C4DH59 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
TRBV5-4A0A0C4DH59 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRBV5-4A0A0C4DH59 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRBV5-4A0A0C4DH59 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRBV5-4A0A0C4DH59 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
TRBV5-4A0A0C4DH59 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
TRBV5-4A0A0C4DH59 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRBV5-4A0A0C4DH59 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRBV5-4A0A0C4DH59 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRBV5-4A0A0C4DH59 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRBV5-4A0A0C4DH59 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRBV5-4A0A0C4DH59 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TRBV5-4A0A0C4DH59 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TRBV5-4A0A0C4DH59 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.19■■□□□ 1.94
TRBV5-4A0A0C4DH59 RARRES2P7-201ENST00000567349 469 ntBASIC27.19■■□□□ 1.94
TRBV5-4A0A0C4DH59 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRBV5-4A0A0C4DH59 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRBV5-4A0A0C4DH59 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
TRBV5-4A0A0C4DH59 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TRBV5-4A0A0C4DH59 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TRBV5-4A0A0C4DH59 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TRBV5-4A0A0C4DH59 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRBV5-4A0A0C4DH59 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRBV5-4A0A0C4DH59 AL133380.1-201ENST00000506013 324 ntBASIC27.14■■□□□ 1.94
TRBV5-4A0A0C4DH59 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TRBV5-4A0A0C4DH59 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRBV5-4A0A0C4DH59 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRBV5-4A0A0C4DH59 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRBV5-4A0A0C4DH59 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.09■■□□□ 1.93
TRBV5-4A0A0C4DH59 SETD8P1-201ENST00000623146 1180 ntBASIC27.09■■□□□ 1.93
TRBV5-4A0A0C4DH59 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRBV5-4A0A0C4DH59 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.07■■□□□ 1.92
TRBV5-4A0A0C4DH59 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRBV5-4A0A0C4DH59 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TRBV5-4A0A0C4DH59 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
TRBV5-4A0A0C4DH59 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.03■■□□□ 1.92
TRBV5-4A0A0C4DH59 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
TRBV5-4A0A0C4DH59 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
TRBV5-4A0A0C4DH59 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
TRBV5-4A0A0C4DH59 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TRBV5-4A0A0C4DH59 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRBV5-4A0A0C4DH59 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
TRBV5-4A0A0C4DH59 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TRBV5-4A0A0C4DH59 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TRBV5-4A0A0C4DH59 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRBV5-4A0A0C4DH59 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRBV5-4A0A0C4DH59 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms