Protein–RNA interactions for Protein: A0A0A0MS15

IGHV3-49, Immunoglobulin heavy variable 3-49, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49A0A0A0MS15 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
IGHV3-49A0A0A0MS15 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
IGHV3-49A0A0A0MS15 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
IGHV3-49A0A0A0MS15 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.3■■□□□ 1
IGHV3-49A0A0A0MS15 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.3■■□□□ 1
IGHV3-49A0A0A0MS15 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
IGHV3-49A0A0A0MS15 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IGHV3-49A0A0A0MS15 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.28■■□□□ 1
IGHV3-49A0A0A0MS15 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.28■■□□□ 1
IGHV3-49A0A0A0MS15 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.27■■□□□ 1
IGHV3-49A0A0A0MS15 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.27■■□□□ 1
IGHV3-49A0A0A0MS15 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
IGHV3-49A0A0A0MS15 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
IGHV3-49A0A0A0MS15 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGHV3-49A0A0A0MS15 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGHV3-49A0A0A0MS15 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
IGHV3-49A0A0A0MS15 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.24■□□□□ 0.99
IGHV3-49A0A0A0MS15 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGHV3-49A0A0A0MS15 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.23■□□□□ 0.99
IGHV3-49A0A0A0MS15 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-49A0A0A0MS15 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
IGHV3-49A0A0A0MS15 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.22■□□□□ 0.99
IGHV3-49A0A0A0MS15 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IGHV3-49A0A0A0MS15 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
IGHV3-49A0A0A0MS15 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGHV3-49A0A0A0MS15 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGHV3-49A0A0A0MS15 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-49A0A0A0MS15 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.19■□□□□ 0.98
IGHV3-49A0A0A0MS15 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
IGHV3-49A0A0A0MS15 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-49A0A0A0MS15 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.18■□□□□ 0.98
IGHV3-49A0A0A0MS15 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGHV3-49A0A0A0MS15 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGHV3-49A0A0A0MS15 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGHV3-49A0A0A0MS15 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.17■□□□□ 0.98
IGHV3-49A0A0A0MS15 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
IGHV3-49A0A0A0MS15 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-49A0A0A0MS15 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
IGHV3-49A0A0A0MS15 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
IGHV3-49A0A0A0MS15 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.14■□□□□ 0.97
IGHV3-49A0A0A0MS15 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.13■□□□□ 0.97
IGHV3-49A0A0A0MS15 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
IGHV3-49A0A0A0MS15 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IGHV3-49A0A0A0MS15 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IGHV3-49A0A0A0MS15 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGHV3-49A0A0A0MS15 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IGHV3-49A0A0A0MS15 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.09■□□□□ 0.97
IGHV3-49A0A0A0MS15 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.09■□□□□ 0.97
IGHV3-49A0A0A0MS15 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.09■□□□□ 0.97
IGHV3-49A0A0A0MS15 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.08■□□□□ 0.97
IGHV3-49A0A0A0MS15 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGHV3-49A0A0A0MS15 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.08■□□□□ 0.97
IGHV3-49A0A0A0MS15 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGHV3-49A0A0A0MS15 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.06■□□□□ 0.96
IGHV3-49A0A0A0MS15 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-49A0A0A0MS15 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IGHV3-49A0A0A0MS15 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGHV3-49A0A0A0MS15 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGHV3-49A0A0A0MS15 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV3-49A0A0A0MS15 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.04■□□□□ 0.96
IGHV3-49A0A0A0MS15 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
IGHV3-49A0A0A0MS15 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.02■□□□□ 0.96
IGHV3-49A0A0A0MS15 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGHV3-49A0A0A0MS15 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGHV3-49A0A0A0MS15 AC120057.4-201ENST00000624722 1615 ntBASIC21.01■□□□□ 0.95
IGHV3-49A0A0A0MS15 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IGHV3-49A0A0A0MS15 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGHV3-49A0A0A0MS15 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-49A0A0A0MS15 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
IGHV3-49A0A0A0MS15 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.98■□□□□ 0.95
IGHV3-49A0A0A0MS15 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGHV3-49A0A0A0MS15 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.96■□□□□ 0.95
IGHV3-49A0A0A0MS15 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGHV3-49A0A0A0MS15 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
IGHV3-49A0A0A0MS15 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.96■□□□□ 0.95
IGHV3-49A0A0A0MS15 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGHV3-49A0A0A0MS15 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-49A0A0A0MS15 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-49A0A0A0MS15 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-49A0A0A0MS15 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.94■□□□□ 0.94
IGHV3-49A0A0A0MS15 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.93■□□□□ 0.94
IGHV3-49A0A0A0MS15 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
IGHV3-49A0A0A0MS15 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.93■□□□□ 0.94
IGHV3-49A0A0A0MS15 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV3-49A0A0A0MS15 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IGHV3-49A0A0A0MS15 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IGHV3-49A0A0A0MS15 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IGHV3-49A0A0A0MS15 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IGHV3-49A0A0A0MS15 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.88■□□□□ 0.93
IGHV3-49A0A0A0MS15 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
IGHV3-49A0A0A0MS15 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
IGHV3-49A0A0A0MS15 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms