Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.05■□□□□ 0.96
IFT52Q9Y366 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT52Q9Y366 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IFT52Q9Y366 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.04■□□□□ 0.96
IFT52Q9Y366 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.04■□□□□ 0.96
IFT52Q9Y366 AL117328.2-201ENST00000624617 1940 ntBASIC21.04■□□□□ 0.96
IFT52Q9Y366 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IFT52Q9Y366 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.04■□□□□ 0.96
IFT52Q9Y366 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
IFT52Q9Y366 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IFT52Q9Y366 ANOS2P-203ENST00000472227 1816 ntBASIC21.04■□□□□ 0.96
IFT52Q9Y366 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IFT52Q9Y366 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IFT52Q9Y366 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT52Q9Y366 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.03■□□□□ 0.96
IFT52Q9Y366 AF131216.4-201ENST00000638924 1588 ntBASIC21.03■□□□□ 0.96
IFT52Q9Y366 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT52Q9Y366 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.03■□□□□ 0.96
IFT52Q9Y366 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
IFT52Q9Y366 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
IFT52Q9Y366 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.03■□□□□ 0.96
IFT52Q9Y366 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
IFT52Q9Y366 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT52Q9Y366 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IFT52Q9Y366 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IFT52Q9Y366 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT52Q9Y366 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFT52Q9Y366 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
IFT52Q9Y366 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
IFT52Q9Y366 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 AC092068.2-201ENST00000590491 1708 ntBASIC21.01■□□□□ 0.95
IFT52Q9Y366 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 AL033527.3-201ENST00000566366 1196 ntBASIC21.01■□□□□ 0.95
IFT52Q9Y366 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFT52Q9Y366 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.01■□□□□ 0.95
IFT52Q9Y366 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21■□□□□ 0.95
IFT52Q9Y366 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
IFT52Q9Y366 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
IFT52Q9Y366 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
IFT52Q9Y366 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IFT52Q9Y366 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
IFT52Q9Y366 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT52Q9Y366 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.99■□□□□ 0.95
IFT52Q9Y366 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.99■□□□□ 0.95
IFT52Q9Y366 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT52Q9Y366 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IFT52Q9Y366 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFT52Q9Y366 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IFT52Q9Y366 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IFT52Q9Y366 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IFT52Q9Y366 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
IFT52Q9Y366 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.97■□□□□ 0.95
IFT52Q9Y366 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.97■□□□□ 0.95
IFT52Q9Y366 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
IFT52Q9Y366 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 YBX1P4-201ENST00000392794 808 ntBASIC20.97■□□□□ 0.95
IFT52Q9Y366 AC004448.1-201ENST00000458332 883 ntBASIC20.97■□□□□ 0.95
IFT52Q9Y366 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.97■□□□□ 0.95
IFT52Q9Y366 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IFT52Q9Y366 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
IFT52Q9Y366 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms