RNA–Protein interactions for RNA: ENST00000378319.7

PHF11-202, Transcript of PHD finger protein 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHF11, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-202ENST00000378319 NISCHQ9Y2I1 1504 aa55.72■■■■■ 6.51
PHF11-202ENST00000378319 CCDC180Q9P1Z9 1646 aa49.34■■■■■ 5.49
PHF11-202ENST00000378319 ABCC9O60706 1549 aa47.89■■■■■ 5.26
PHF11-202ENST00000378319 ZCCHC6Q5VYS8 1495 aaKnown RBP46.51■■■■■ 5.04
PHF11-202ENST00000378319 NACADO15069 1562 aa46.31■■■■■ 5
PHF11-202ENST00000378319 DCAF8L2P0C7V8 631 aa46.29■■■■■ 5
PHF11-202ENST00000378319 RB1CC1Q8TDY2 1594 aa46.24■■■■■ 4.99
PHF11-202ENST00000378319 MYO15BQ96JP2 1530 aa46.21■■■■■ 4.99
PHF11-202ENST00000378319 DCAF1Q9Y4B6 1507 aa46.14■■■■■ 4.98
PHF11-202ENST00000378319 UNC13AQ9UPW8 1703 aa45.19■■■■■ 4.82
PHF11-202ENST00000378319 SCRIBQ14160 1630 aa45.03■■■■■ 4.8
PHF11-202ENST00000378319 BICRAQ9NZM4 1560 aa44.87■■■■■ 4.77
PHF11-202ENST00000378319 PABPN1Q86U42 306 aaKnown RBP eCLIP44.82■■■■■ 4.76
PHF11-202ENST00000378319 SHROOM4Q9ULL8 1493 aa44.44■■■■■ 4.7
PHF11-202ENST00000378319 DNAJC5BQ9UF47 199 aa43.65■■■■■ 4.58
PHF11-202ENST00000378319 EIF4G1Q04637 1599 aaKnown RBP43.64■■■■■ 4.58
PHF11-202ENST00000378319 CECR2Q9BXF3 1484 aa43.37■■■■■ 4.53
PHF11-202ENST00000378319 CC2D2AQ9P2K1 1620 aa43.35■■■■■ 4.53
PHF11-202ENST00000378319 BAZ1AQ9NRL2 1556 aaPredicted RBP43.15■■■■■ 4.5
PHF11-202ENST00000378319 SMARCA4P51532 1647 aa43.13■■■■■ 4.49
PHF11-202ENST00000378319 MROH2BQ7Z745 1585 aa42.94■■■■■ 4.47
PHF11-202ENST00000378319 ATAD2BQ9ULI0 1458 aa42.83■■■■■ 4.45
PHF11-202ENST00000378319 SMARCA2P51531 1590 aa42.76■■■■■ 4.44
PHF11-202ENST00000378319 NCAPD3P42695 1498 aa42.75■■■■■ 4.43
PHF11-202ENST00000378319 PEG3Q9GZU2 1588 aa42.75■■■■■ 4.43
PHF11-202ENST00000378319 RSF1Q96T23 1441 aaPredicted RBP42.61■■■■■ 4.41
PHF11-202ENST00000378319 HMGXB3Q12766 1538 aa42.56■■■■■ 4.4
PHF11-202ENST00000378319 WIZO95785 1651 aa42.48■■■■■ 4.39
PHF11-202ENST00000378319 BAZ1BQ9UIG0 1483 aaKnown RBP42.47■■■■■ 4.39
PHF11-202ENST00000378319 TOP2AP11388 1531 aaKnown RBP42.07■■■■■ 4.33
PHF11-202ENST00000378319 SUPT5HO00267 1087 aaKnown RBP41.75■■■■■ 4.27
PHF11-202ENST00000378319 CCDC88BA6NC98 1476 aa41.58■■■■■ 4.25
PHF11-202ENST00000378319 NESP48681 1621 aa41.57■■■■■ 4.25
PHF11-202ENST00000378319 LAMC3Q9Y6N6 1575 aa41.53■■■■■ 4.24
PHF11-202ENST00000378319 CADPSQ9ULU8 1353 aa41.5■■■■■ 4.23
PHF11-202ENST00000378319 CFTRP13569 1480 aa41.36■■■■■ 4.21
PHF11-202ENST00000378319 PDS5BQ9NTI5 1447 aa41.23■■■■■ 4.19
PHF11-202ENST00000378319 ERCC6Q03468 1493 aa41.22■■■■■ 4.19
PHF11-202ENST00000378319 KIF21AQ7Z4S6 1674 aa41.07■■■■■ 4.16
PHF11-202ENST00000378319 FANCD2Q9BXW9 1451 aa41.02■■■■■ 4.16
PHF11-202ENST00000378319 PRDM2Q13029 1718 aa41.01■■■■■ 4.16
PHF11-202ENST00000378319 CEP164Q9UPV0 1460 aa40.92■■■■■ 4.14
PHF11-202ENST00000378319 THOC2Q8NI27 1593 aaKnown RBP40.87■■■■■ 4.13
PHF11-202ENST00000378319 MRC2Q9UBG0 1479 aa40.79■■■■■ 4.12
PHF11-202ENST00000378319 CUX2O14529 1486 aa40.69■■■■■ 4.1
PHF11-202ENST00000378319 WDR62O43379 1518 aa40.66■■■■■ 4.1
PHF11-202ENST00000378319 URB2Q14146 1524 aaKnown RBP40.6■■■■■ 4.09
PHF11-202ENST00000378319 ABCC8Q09428 1581 aa40.42■■■■■ 4.06
PHF11-202ENST00000378319 TOPBP1Q92547 1522 aa40.41■■■■■ 4.06
PHF11-202ENST00000378319 DNMBPQ6XZF7 1577 aa40.39■■■■■ 4.06
PHF11-202ENST00000378319 CUX1P39880 1505 aa40.26■■■■■ 4.04
PHF11-202ENST00000378319 WRNQ14191 1432 aaPredicted RBP eCLIP40.14■■■■■ 4.02
PHF11-202ENST00000378319 POLA1P09884 1462 aaPredicted RBP40.1■■■■■ 4.01
PHF11-202ENST00000378319 IFT140Q96RY7 1462 aa40.06■■■■■ 4
PHF11-202ENST00000378319 FGD5Q6ZNL6 1462 aa40.05■■■■■ 4
PHF11-202ENST00000378319 SYNJ1O43426 1573 aa40.02■■■■■ 4
PHF11-202ENST00000378319 TOP2BQ02880 1626 aa40.02■■■■■ 4
PHF11-202ENST00000378319 BIVM-ERCC5R4GMW8 1640 aa40■■■■□ 3.99
PHF11-202ENST00000378319 TARBP1Q13395 1621 aaKnown RBP39.95■■■■□ 3.99
PHF11-202ENST00000378319 SOGA1O94964 1423 aa39.92■■■■□ 3.98
PHF11-202ENST00000378319 RAD54L2Q9Y4B4 1467 aa39.92■■■■□ 3.98
PHF11-202ENST00000378319 ZNF608Q9ULD9 1512 aaPredicted RBP39.86■■■■□ 3.97
PHF11-202ENST00000378319 WDR97A6NE52 1622 aa39.71■■■■□ 3.95
PHF11-202ENST00000378319 ABCA10Q8WWZ4 1543 aa39.71■■■■□ 3.95
PHF11-202ENST00000378319 EIF4G3O43432 1585 aaKnown RBP39.69■■■■□ 3.94
PHF11-202ENST00000378319 AQRO60306 1485 aaKnown RBP eCLIP39.67■■■■□ 3.94
PHF11-202ENST00000378319 TDRD9Q8NDG6 1382 aaKnown RBP39.66■■■■□ 3.94
PHF11-202ENST00000378319 ABCA5Q8WWZ7 1642 aa39.5■■■■□ 3.91
PHF11-202ENST00000378319 GAPVD1Q14C86 1478 aa39.48■■■■□ 3.91
PHF11-202ENST00000378319 GRIN2BQ13224 1484 aa39.42■■■■□ 3.9
PHF11-202ENST00000378319 TRIM41Q8WV44 630 aa39.42■■■■□ 3.9
PHF11-202ENST00000378319 PBRM1Q86U86 1689 aa39.34■■■■□ 3.89
PHF11-202ENST00000378319 SNAPC4Q5SXM2 1469 aa39.31■■■■□ 3.88
PHF11-202ENST00000378319 MAGI1Q96QZ7 1491 aaPredicted RBP39.28■■■■□ 3.88
PHF11-202ENST00000378319 KIF27Q86VH2 1401 aa39.26■■■■□ 3.88
PHF11-202ENST00000378319 CHIC1Q5VXU3 224 aa39.24■■■■□ 3.87
PHF11-202ENST00000378319 ERICH3Q5RHP9 1530 aa39.23■■■■□ 3.87
PHF11-202ENST00000378319 SYNJ2O15056 1496 aa39.12■■■■□ 3.85
PHF11-202ENST00000378319 IGF1RP08069 1367 aa39.09■■■■□ 3.85
PHF11-202ENST00000378319 CHD1O14646 1710 aa39.09■■■■□ 3.85
PHF11-202ENST00000378319 ADAMTS12P58397 1594 aa39.09■■■■□ 3.85
PHF11-202ENST00000378319 FBLN2P98095 1184 aa39.06■■■■□ 3.84
PHF11-202ENST00000378319 OSCARQ8IYS5 282 aa39.05■■■■□ 3.84
PHF11-202ENST00000378319 FHAD1B1AJZ9 1412 aa39.04■■■■□ 3.84
PHF11-202ENST00000378319 RUSC2Q8N2Y8 1516 aa39.04■■■■□ 3.84
PHF11-202ENST00000378319 CHMP7Q8WUX9 453 aaPredicted RBP39.04■■■■□ 3.84
PHF11-202ENST00000378319 DNAJC5Q9H3Z4 198 aa38.98■■■■□ 3.83
PHF11-202ENST00000378319 GRIN2AQ12879 1464 aa38.92■■■■□ 3.82
PHF11-202ENST00000378319 CUL7Q14999 1698 aa38.92■■■■□ 3.82
PHF11-202ENST00000378319 CARMIL1Q5VZK9 1371 aa38.84■■■■□ 3.81
PHF11-202ENST00000378319 EEA1Q15075 1411 aa38.77■■■■□ 3.8
PHF11-202ENST00000378319 NUP160Q12769 1436 aa38.75■■■■□ 3.79
PHF11-202ENST00000378319 CLASP1Q7Z460 1538 aa38.73■■■■□ 3.79
PHF11-202ENST00000378319 CEP170Q5SW79 1584 aa38.71■■■■□ 3.79
PHF11-202ENST00000378319 CSRNP3Q8WYN3 585 aa38.67■■■■□ 3.78
PHF11-202ENST00000378319 RAPGEF2Q9Y4G8 1499 aa38.66■■■■□ 3.78
PHF11-202ENST00000378319 PRXQ9BXM0 1461 aa38.64■■■■□ 3.78
PHF11-202ENST00000378319 FAM9AQ8IZU1 332 aaPredicted RBP38.57■■■■□ 3.76
PHF11-202ENST00000378319 KIAA0586Q9BVV6 1533 aa38.46■■■■□ 3.75
PHF11-202ENST00000378319 ARHGEF11O15085 1522 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms