RNA–Protein interactions for RNA: ENST00000564000.5

FAM173A-202, Transcript of family with sequence similarity 173 member A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FAM173A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM173A-202ENST00000564000 NISCHQ9Y2I1 1504 aa58.57■■■■■ 6.97
FAM173A-202ENST00000564000 CCDC180Q9P1Z9 1646 aa52.26■■■■■ 5.96
FAM173A-202ENST00000564000 ABCC9O60706 1549 aa51.6■■■■■ 5.85
FAM173A-202ENST00000564000 RB1CC1Q8TDY2 1594 aa49.39■■■■■ 5.5
FAM173A-202ENST00000564000 NACADO15069 1562 aa49.21■■■■■ 5.47
FAM173A-202ENST00000564000 DCAF8L2P0C7V8 631 aa49.06■■■■■ 5.44
FAM173A-202ENST00000564000 MYO15BQ96JP2 1530 aa48.75■■■■■ 5.39
FAM173A-202ENST00000564000 ZCCHC6Q5VYS8 1495 aaKnown RBP48.71■■■■■ 5.39
FAM173A-202ENST00000564000 DCAF1Q9Y4B6 1507 aa48.4■■■■■ 5.34
FAM173A-202ENST00000564000 UNC13AQ9UPW8 1703 aa48.38■■■■■ 5.33
FAM173A-202ENST00000564000 PABPN1Q86U42 306 aaKnown RBP eCLIP48.13■■■■■ 5.3
FAM173A-202ENST00000564000 BICRAQ9NZM4 1560 aa48■■■■■ 5.27
FAM173A-202ENST00000564000 DNAJC5BQ9UF47 199 aa47.8■■■■■ 5.24
FAM173A-202ENST00000564000 SCRIBQ14160 1630 aa47.71■■■■■ 5.23
FAM173A-202ENST00000564000 SHROOM4Q9ULL8 1493 aa47.33■■■■■ 5.17
FAM173A-202ENST00000564000 EIF4G1Q04637 1599 aaKnown RBP46.73■■■■■ 5.07
FAM173A-202ENST00000564000 CC2D2AQ9P2K1 1620 aa46.66■■■■■ 5.06
FAM173A-202ENST00000564000 CECR2Q9BXF3 1484 aa46.38■■■■■ 5.02
FAM173A-202ENST00000564000 SMARCA4P51532 1647 aa45.56■■■■■ 4.88
FAM173A-202ENST00000564000 NCAPD3P42695 1498 aa45.42■■■■■ 4.86
FAM173A-202ENST00000564000 ATAD2BQ9ULI0 1458 aa45.41■■■■■ 4.86
FAM173A-202ENST00000564000 BAZ1AQ9NRL2 1556 aaPredicted RBP45.4■■■■■ 4.86
FAM173A-202ENST00000564000 SMARCA2P51531 1590 aa45.29■■■■■ 4.84
FAM173A-202ENST00000564000 HMGXB3Q12766 1538 aa45.17■■■■■ 4.82
FAM173A-202ENST00000564000 MROH2BQ7Z745 1585 aa45.17■■■■■ 4.82
FAM173A-202ENST00000564000 PEG3Q9GZU2 1588 aa45.1■■■■■ 4.81
FAM173A-202ENST00000564000 BAZ1BQ9UIG0 1483 aaKnown RBP44.99■■■■■ 4.79
FAM173A-202ENST00000564000 WIZO95785 1651 aa44.67■■■■■ 4.74
FAM173A-202ENST00000564000 NESP48681 1621 aa44.55■■■■■ 4.72
FAM173A-202ENST00000564000 RSF1Q96T23 1441 aaPredicted RBP44.46■■■■■ 4.71
FAM173A-202ENST00000564000 ERCC6Q03468 1493 aa44.46■■■■■ 4.71
FAM173A-202ENST00000564000 LAMC3Q9Y6N6 1575 aa44.3■■■■■ 4.68
FAM173A-202ENST00000564000 CUX2O14529 1486 aa44.15■■■■■ 4.66
FAM173A-202ENST00000564000 TOP2AP11388 1531 aaKnown RBP44.13■■■■■ 4.65
FAM173A-202ENST00000564000 CADPSQ9ULU8 1353 aa44.06■■■■■ 4.64
FAM173A-202ENST00000564000 KIF21AQ7Z4S6 1674 aa44.03■■■■■ 4.64
FAM173A-202ENST00000564000 PDS5BQ9NTI5 1447 aa43.98■■■■■ 4.63
FAM173A-202ENST00000564000 THOC2Q8NI27 1593 aaKnown RBP43.97■■■■■ 4.63
FAM173A-202ENST00000564000 CFTRP13569 1480 aa43.73■■■■■ 4.59
FAM173A-202ENST00000564000 CCDC88BA6NC98 1476 aa43.62■■■■■ 4.57
FAM173A-202ENST00000564000 MRC2Q9UBG0 1479 aa43.61■■■■■ 4.57
FAM173A-202ENST00000564000 FANCD2Q9BXW9 1451 aa43.59■■■■■ 4.57
FAM173A-202ENST00000564000 CEP164Q9UPV0 1460 aa43.57■■■■■ 4.56
FAM173A-202ENST00000564000 WDR62O43379 1518 aa43.5■■■■■ 4.55
FAM173A-202ENST00000564000 PRDM2Q13029 1718 aa43.41■■■■■ 4.54
FAM173A-202ENST00000564000 DNAJC5Q9H3Z4 198 aa43.31■■■■■ 4.52
FAM173A-202ENST00000564000 URB2Q14146 1524 aaKnown RBP43.22■■■■■ 4.51
FAM173A-202ENST00000564000 SUPT5HO00267 1087 aaKnown RBP42.96■■■■■ 4.47
FAM173A-202ENST00000564000 TOPBP1Q92547 1522 aa42.86■■■■■ 4.45
FAM173A-202ENST00000564000 DNMBPQ6XZF7 1577 aa42.77■■■■■ 4.44
FAM173A-202ENST00000564000 ABCC8Q09428 1581 aa42.73■■■■■ 4.43
FAM173A-202ENST00000564000 IFT140Q96RY7 1462 aa42.66■■■■■ 4.42
FAM173A-202ENST00000564000 ZNF608Q9ULD9 1512 aaPredicted RBP42.58■■■■■ 4.41
FAM173A-202ENST00000564000 POLA1P09884 1462 aaPredicted RBP42.47■■■■■ 4.39
FAM173A-202ENST00000564000 TARBP1Q13395 1621 aaKnown RBP42.46■■■■■ 4.39
FAM173A-202ENST00000564000 CUX1P39880 1505 aa42.41■■■■■ 4.38
FAM173A-202ENST00000564000 EIF4G3O43432 1585 aaKnown RBP42.39■■■■■ 4.38
FAM173A-202ENST00000564000 RAD54L2Q9Y4B4 1467 aa42.31■■■■■ 4.36
FAM173A-202ENST00000564000 FGD5Q6ZNL6 1462 aa42.3■■■■■ 4.36
FAM173A-202ENST00000564000 AQRO60306 1485 aaKnown RBP eCLIP42.26■■■■■ 4.36
FAM173A-202ENST00000564000 SOGA1O94964 1423 aa42.24■■■■■ 4.35
FAM173A-202ENST00000564000 OSCARQ8IYS5 282 aa42.19■■■■■ 4.34
FAM173A-202ENST00000564000 TDRD9Q8NDG6 1382 aaKnown RBP42.09■■■■■ 4.33
FAM173A-202ENST00000564000 WDR97A6NE52 1622 aa42.02■■■■■ 4.32
FAM173A-202ENST00000564000 CHD1O14646 1710 aa41.96■■■■■ 4.31
FAM173A-202ENST00000564000 BIVM-ERCC5R4GMW8 1640 aa41.91■■■■■ 4.3
FAM173A-202ENST00000564000 SYNJ1O43426 1573 aa41.9■■■■■ 4.3
FAM173A-202ENST00000564000 WRNQ14191 1432 aaPredicted RBP eCLIP41.9■■■■■ 4.3
FAM173A-202ENST00000564000 TOP2BQ02880 1626 aa41.89■■■■■ 4.3
FAM173A-202ENST00000564000 SNAPC4Q5SXM2 1469 aa41.85■■■■■ 4.29
FAM173A-202ENST00000564000 ABCA10Q8WWZ4 1543 aa41.85■■■■■ 4.29
FAM173A-202ENST00000564000 GRIN2BQ13224 1484 aa41.8■■■■■ 4.28
FAM173A-202ENST00000564000 FBLN2P98095 1184 aa41.78■■■■■ 4.28
FAM173A-202ENST00000564000 PBRM1Q86U86 1689 aa41.77■■■■■ 4.28
FAM173A-202ENST00000564000 ABCA5Q8WWZ7 1642 aa41.77■■■■■ 4.28
FAM173A-202ENST00000564000 GAPVD1Q14C86 1478 aa41.76■■■■■ 4.28
FAM173A-202ENST00000564000 MAGI1Q96QZ7 1491 aaPredicted RBP41.74■■■■■ 4.27
FAM173A-202ENST00000564000 TRIM41Q8WV44 630 aa41.72■■■■■ 4.27
FAM173A-202ENST00000564000 RIMBP3CA6NJZ7 1639 aa41.68■■■■■ 4.26
FAM173A-202ENST00000564000 RIMBP3BA6NNM3 1639 aa41.68■■■■■ 4.26
FAM173A-202ENST00000564000 RIMBP3Q9UFD9 1639 aa41.68■■■■■ 4.26
FAM173A-202ENST00000564000 ARHGEF11O15085 1522 aa41.6■■■■■ 4.25
FAM173A-202ENST00000564000 SYNJ2O15056 1496 aa41.6■■■■■ 4.25
FAM173A-202ENST00000564000 CHMP7Q8WUX9 453 aaPredicted RBP41.57■■■■■ 4.25
FAM173A-202ENST00000564000 CLASP1Q7Z460 1538 aa41.47■■■■■ 4.23
FAM173A-202ENST00000564000 ADAMTS12P58397 1594 aa41.4■■■■■ 4.22
FAM173A-202ENST00000564000 ERICH3Q5RHP9 1530 aa41.33■■■■■ 4.21
FAM173A-202ENST00000564000 GRIN2AQ12879 1464 aa41.29■■■■■ 4.2
FAM173A-202ENST00000564000 ARAP1Q96P48 1450 aa41.26■■■■■ 4.2
FAM173A-202ENST00000564000 FHAD1B1AJZ9 1412 aa41.25■■■■■ 4.19
FAM173A-202ENST00000564000 CYB5RLQ6IPT4 315 aa41.19■■■■■ 4.18
FAM173A-202ENST00000564000 CEP170Q5SW79 1584 aa41.16■■■■■ 4.18
FAM173A-202ENST00000564000 NUP160Q12769 1436 aa41.13■■■■■ 4.17
FAM173A-202ENST00000564000 KIF27Q86VH2 1401 aa41.03■■■■■ 4.16
FAM173A-202ENST00000564000 IGF1RP08069 1367 aa40.96■■■■■ 4.15
FAM173A-202ENST00000564000 ERCC6L2Q5T890 1561 aa40.92■■■■■ 4.14
FAM173A-202ENST00000564000 SHROOM2Q13796 1616 aa40.9■■■■■ 4.14
FAM173A-202ENST00000564000 CUL7Q14999 1698 aa40.88■■■■■ 4.13
FAM173A-202ENST00000564000 RUSC2Q8N2Y8 1516 aa40.8■■■■■ 4.12
FAM173A-202ENST00000564000 CARMIL1Q5VZK9 1371 aa40.69■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms