RNA–Protein interactions for RNA: ENST00000356221.7

CDC16-203, Transcript of cell division cycle 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC16, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-203ENST00000356221 NISCHQ9Y2I1 1504 aa49.51■■■■■ 5.52
CDC16-203ENST00000356221 CCDC180Q9P1Z9 1646 aa42.65■■■■■ 4.42
CDC16-203ENST00000356221 ZCCHC6Q5VYS8 1495 aaKnown RBP41.68■■■■■ 4.26
CDC16-203ENST00000356221 SHROOM4Q9ULL8 1493 aa41.29■■■■■ 4.2
CDC16-203ENST00000356221 DCAF8L2P0C7V8 631 aa41.16■■■■■ 4.18
CDC16-203ENST00000356221 DCAF1Q9Y4B6 1507 aa40.71■■■■■ 4.11
CDC16-203ENST00000356221 ABCC9O60706 1549 aa40.22■■■■■ 4.03
CDC16-203ENST00000356221 SUPT5HO00267 1087 aaKnown RBP40.01■■■■■ 4
CDC16-203ENST00000356221 MYO15BQ96JP2 1530 aa39.94■■■■□ 3.98
CDC16-203ENST00000356221 SCRIBQ14160 1630 aa39.68■■■■□ 3.94
CDC16-203ENST00000356221 NACADO15069 1562 aa39.65■■■■□ 3.94
CDC16-203ENST00000356221 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
CDC16-203ENST00000356221 RSF1Q96T23 1441 aaPredicted RBP38.75■■■■□ 3.79
CDC16-203ENST00000356221 CECR2Q9BXF3 1484 aa38.63■■■■□ 3.77
CDC16-203ENST00000356221 UNC13AQ9UPW8 1703 aa38.57■■■■□ 3.76
CDC16-203ENST00000356221 CHIC1Q5VXU3 224 aa38.47■■■■□ 3.75
CDC16-203ENST00000356221 MROH2BQ7Z745 1585 aa38.41■■■■□ 3.74
CDC16-203ENST00000356221 PABPN1Q86U42 306 aaKnown RBP eCLIP38.22■■■■□ 3.71
CDC16-203ENST00000356221 BICRAQ9NZM4 1560 aa38.15■■■■□ 3.7
CDC16-203ENST00000356221 WIZO95785 1651 aa38.14■■■■□ 3.7
CDC16-203ENST00000356221 BAZ1AQ9NRL2 1556 aaPredicted RBP38.12■■■■□ 3.69
CDC16-203ENST00000356221 SMARCA4P51532 1647 aa37.92■■■■□ 3.66
CDC16-203ENST00000356221 TOP2AP11388 1531 aaKnown RBP37.58■■■■□ 3.61
CDC16-203ENST00000356221 TRIM41Q8WV44 630 aa37.4■■■■□ 3.58
CDC16-203ENST00000356221 CCDC88BA6NC98 1476 aa37.36■■■■□ 3.57
CDC16-203ENST00000356221 SMARCA2P51531 1590 aa37.32■■■■□ 3.57
CDC16-203ENST00000356221 PEG3Q9GZU2 1588 aa37.29■■■■□ 3.56
CDC16-203ENST00000356221 LOC105371045A0A1W2PR82 267 aa37.24■■■■□ 3.55
CDC16-203ENST00000356221 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
CDC16-203ENST00000356221 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
CDC16-203ENST00000356221 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.52
CDC16-203ENST00000356221 FAM9AQ8IZU1 332 aaPredicted RBP36.98■■■■□ 3.51
CDC16-203ENST00000356221 ABCC8Q09428 1581 aa36.89■■■■□ 3.5
CDC16-203ENST00000356221 NCAPD3P42695 1498 aa36.67■■■■□ 3.46
CDC16-203ENST00000356221 EHMT2Q96KQ7 1210 aa36.63■■■■□ 3.46
CDC16-203ENST00000356221 HMGXB3Q12766 1538 aa36.6■■■■□ 3.45
CDC16-203ENST00000356221 WRNQ14191 1432 aaPredicted RBP eCLIP36.43■■■■□ 3.42
CDC16-203ENST00000356221 SOGA1O94964 1423 aa36.34■■■■□ 3.41
CDC16-203ENST00000356221 SYNJ1O43426 1573 aa36.29■■■■□ 3.4
CDC16-203ENST00000356221 CC2D2AQ9P2K1 1620 aa36.28■■■■□ 3.4
CDC16-203ENST00000356221 RUSC2Q8N2Y8 1516 aa36.21■■■■□ 3.39
CDC16-203ENST00000356221 PCGF6Q9BYE7 350 aa36.15■■■■□ 3.38
CDC16-203ENST00000356221 CFTRP13569 1480 aa36.08■■■■□ 3.37
CDC16-203ENST00000356221 CSRNP3Q8WYN3 585 aa36.05■■■■□ 3.36
CDC16-203ENST00000356221 EEA1Q15075 1411 aa36.04■■■■□ 3.36
CDC16-203ENST00000356221 TOP2BQ02880 1626 aa35.97■■■■□ 3.35
CDC16-203ENST00000356221 BIVM-ERCC5R4GMW8 1640 aa35.87■■■■□ 3.33
CDC16-203ENST00000356221 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
CDC16-203ENST00000356221 CUX1P39880 1505 aa35.83■■■■□ 3.33
CDC16-203ENST00000356221 TRIM26Q12899 539 aaPredicted RBP35.77■■■■□ 3.32
CDC16-203ENST00000356221 UBTFP17480 764 aaKnown RBP35.76■■■■□ 3.32
CDC16-203ENST00000356221 PRDM2Q13029 1718 aa35.76■■■■□ 3.32
CDC16-203ENST00000356221 TNIKQ9UKE5 1360 aa35.73■■■■□ 3.31
CDC16-203ENST00000356221 GOLGA3Q08378 1498 aa35.71■■■■□ 3.31
CDC16-203ENST00000356221 CEP162Q5TB80 1403 aa35.68■■■■□ 3.3
CDC16-203ENST00000356221 CEP164Q9UPV0 1460 aa35.63■■■■□ 3.29
CDC16-203ENST00000356221 KIF21BO75037 1637 aa35.6■■■■□ 3.29
CDC16-203ENST00000356221 PPARGC1BQ86YN6 1023 aaKnown RBP35.57■■■■□ 3.29
CDC16-203ENST00000356221 DNAJC5BQ9UF47 199 aa35.57■■■■□ 3.28
CDC16-203ENST00000356221 NESP48681 1621 aa35.54■■■■□ 3.28
CDC16-203ENST00000356221 RAPGEF2Q9Y4G8 1499 aa35.51■■■■□ 3.28
CDC16-203ENST00000356221 FANCD2Q9BXW9 1451 aa35.5■■■■□ 3.27
CDC16-203ENST00000356221 HRCP23327 699 aa35.46■■■■□ 3.27
CDC16-203ENST00000356221 KIF27Q86VH2 1401 aa35.4■■■■□ 3.26
CDC16-203ENST00000356221 FGD5Q6ZNL6 1462 aa35.34■■■■□ 3.25
CDC16-203ENST00000356221 PRXQ9BXM0 1461 aa35.33■■■■□ 3.25
CDC16-203ENST00000356221 LAMC3Q9Y6N6 1575 aa35.27■■■■□ 3.24
CDC16-203ENST00000356221 CUX2O14529 1486 aa35.26■■■■□ 3.24
CDC16-203ENST00000356221 RANGAP1P46060 587 aaPredicted RBP35.26■■■■□ 3.23
CDC16-203ENST00000356221 CLIP1P30622 1438 aa35.25■■■■□ 3.23
CDC16-203ENST00000356221 ERICH3Q5RHP9 1530 aa35.22■■■■□ 3.23
CDC16-203ENST00000356221 DNMBPQ6XZF7 1577 aa35.19■■■■□ 3.22
CDC16-203ENST00000356221 TTBK1Q5TCY1 1321 aaPredicted RBP35.18■■■■□ 3.22
CDC16-203ENST00000356221 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
CDC16-203ENST00000356221 IGF1RP08069 1367 aa35.12■■■■□ 3.21
CDC16-203ENST00000356221 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
CDC16-203ENST00000356221 POLA1P09884 1462 aaPredicted RBP35.07■■■■□ 3.21
CDC16-203ENST00000356221 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
CDC16-203ENST00000356221 PDS5BQ9NTI5 1447 aa35.05■■■■□ 3.2
CDC16-203ENST00000356221 VPS8Q8N3P4 1428 aa34.97■■■■□ 3.19
CDC16-203ENST00000356221 KIF21AQ7Z4S6 1674 aa34.96■■■■□ 3.19
CDC16-203ENST00000356221 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
CDC16-203ENST00000356221 CARMIL1Q5VZK9 1371 aa34.94■■■■□ 3.18
CDC16-203ENST00000356221 ARAP1Q96P48 1450 aa34.83■■■■□ 3.17
CDC16-203ENST00000356221 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
CDC16-203ENST00000356221 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
CDC16-203ENST00000356221 APLP2Q06481 763 aa34.72■■■■□ 3.15
CDC16-203ENST00000356221 ARHGAP35Q9NRY4 1499 aa34.7■■■■□ 3.15
CDC16-203ENST00000356221 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
CDC16-203ENST00000356221 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
CDC16-203ENST00000356221 CUL7Q14999 1698 aa34.58■■■■□ 3.13
CDC16-203ENST00000356221 MRC2Q9UBG0 1479 aa34.57■■■■□ 3.13
CDC16-203ENST00000356221 TARBP1Q13395 1621 aaKnown RBP34.56■■■■□ 3.12
CDC16-203ENST00000356221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.52■■■■□ 3.12
CDC16-203ENST00000356221 ZEB1P37275 1124 aaPredicted RBP34.5■■■■□ 3.11
CDC16-203ENST00000356221 KANK4Q5T7N3 995 aaPredicted RBP34.46■■■■□ 3.11
CDC16-203ENST00000356221 P3H3Q8IVL6 736 aa34.43■■■■□ 3.1
CDC16-203ENST00000356221 AQRO60306 1485 aaKnown RBP eCLIP34.38■■■■□ 3.092e-7■■■■■ 38.5
CDC16-203ENST00000356221 CCER1Q8TC90 406 aaPredicted RBP34.36■■■■□ 3.09
CDC16-203ENST00000356221 CTTNBP2Q8WZ74 1663 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms