RNA–Protein interactions for RNA: ENST00000392794.3

YBX1P4-201, Transcript of Y-box binding protein 1 pseudogene 4, humanhuman

BASIC

Gene YBX1P4, Length 808 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P4-201ENST00000392794 NISCHQ9Y2I1 1504 aa58.32■■■■■ 6.93
YBX1P4-201ENST00000392794 CCDC180Q9P1Z9 1646 aa52.1■■■■■ 5.93
YBX1P4-201ENST00000392794 ABCC9O60706 1549 aa51.74■■■■■ 5.87
YBX1P4-201ENST00000392794 RB1CC1Q8TDY2 1594 aa49.46■■■■■ 5.51
YBX1P4-201ENST00000392794 DCAF8L2P0C7V8 631 aa49.29■■■■■ 5.48
YBX1P4-201ENST00000392794 NACADO15069 1562 aa49.21■■■■■ 5.47
YBX1P4-201ENST00000392794 MYO15BQ96JP2 1530 aa48.65■■■■■ 5.38
YBX1P4-201ENST00000392794 ZCCHC6Q5VYS8 1495 aaKnown RBP48.41■■■■■ 5.34
YBX1P4-201ENST00000392794 PABPN1Q86U42 306 aaKnown RBP eCLIP48.29■■■■■ 5.32
YBX1P4-201ENST00000392794 DCAF1Q9Y4B6 1507 aa48.18■■■■■ 5.3
YBX1P4-201ENST00000392794 UNC13AQ9UPW8 1703 aa48.13■■■■■ 5.3
YBX1P4-201ENST00000392794 DNAJC5BQ9UF47 199 aa48.03■■■■■ 5.28
YBX1P4-201ENST00000392794 BICRAQ9NZM4 1560 aa47.84■■■■■ 5.25
YBX1P4-201ENST00000392794 SCRIBQ14160 1630 aa47.55■■■■■ 5.2
YBX1P4-201ENST00000392794 SHROOM4Q9ULL8 1493 aa47.4■■■■■ 5.18
YBX1P4-201ENST00000392794 EIF4G1Q04637 1599 aaKnown RBP46.73■■■■■ 5.07
YBX1P4-201ENST00000392794 CC2D2AQ9P2K1 1620 aa46.71■■■■■ 5.07
YBX1P4-201ENST00000392794 CECR2Q9BXF3 1484 aa46.57■■■■■ 5.05
YBX1P4-201ENST00000392794 NCAPD3P42695 1498 aa45.42■■■■■ 4.86
YBX1P4-201ENST00000392794 SMARCA4P51532 1647 aa45.37■■■■■ 4.85
YBX1P4-201ENST00000392794 ATAD2BQ9ULI0 1458 aa45.34■■■■■ 4.85
YBX1P4-201ENST00000392794 BAZ1AQ9NRL2 1556 aaPredicted RBP45.29■■■■■ 4.84
YBX1P4-201ENST00000392794 SMARCA2P51531 1590 aa45.28■■■■■ 4.84
YBX1P4-201ENST00000392794 HMGXB3Q12766 1538 aa45.11■■■■■ 4.81
YBX1P4-201ENST00000392794 BAZ1BQ9UIG0 1483 aaKnown RBP44.99■■■■■ 4.79
YBX1P4-201ENST00000392794 MROH2BQ7Z745 1585 aa44.92■■■■■ 4.78
YBX1P4-201ENST00000392794 PEG3Q9GZU2 1588 aa44.9■■■■■ 4.78
YBX1P4-201ENST00000392794 ERCC6Q03468 1493 aa44.75■■■■■ 4.75
YBX1P4-201ENST00000392794 NESP48681 1621 aa44.52■■■■■ 4.72
YBX1P4-201ENST00000392794 CUX2O14529 1486 aa44.42■■■■■ 4.7
YBX1P4-201ENST00000392794 WIZO95785 1651 aa44.39■■■■■ 4.7
YBX1P4-201ENST00000392794 LAMC3Q9Y6N6 1575 aa44.33■■■■■ 4.69
YBX1P4-201ENST00000392794 RSF1Q96T23 1441 aaPredicted RBP44.19■■■■■ 4.66
YBX1P4-201ENST00000392794 PDS5BQ9NTI5 1447 aa44.16■■■■■ 4.66
YBX1P4-201ENST00000392794 CADPSQ9ULU8 1353 aa44.11■■■■■ 4.65
YBX1P4-201ENST00000392794 THOC2Q8NI27 1593 aaKnown RBP43.92■■■■■ 4.62
YBX1P4-201ENST00000392794 KIF21AQ7Z4S6 1674 aa43.91■■■■■ 4.62
YBX1P4-201ENST00000392794 TOP2AP11388 1531 aaKnown RBP43.91■■■■■ 4.62
YBX1P4-201ENST00000392794 DNAJC5Q9H3Z4 198 aa43.88■■■■■ 4.62
YBX1P4-201ENST00000392794 MRC2Q9UBG0 1479 aa43.68■■■■■ 4.58
YBX1P4-201ENST00000392794 CFTRP13569 1480 aa43.65■■■■■ 4.58
YBX1P4-201ENST00000392794 CEP164Q9UPV0 1460 aa43.63■■■■■ 4.57
YBX1P4-201ENST00000392794 FANCD2Q9BXW9 1451 aa43.59■■■■■ 4.57
YBX1P4-201ENST00000392794 WDR62O43379 1518 aa43.49■■■■■ 4.55
YBX1P4-201ENST00000392794 CCDC88BA6NC98 1476 aa43.41■■■■■ 4.54
YBX1P4-201ENST00000392794 PRDM2Q13029 1718 aa43.16■■■■■ 4.5
YBX1P4-201ENST00000392794 URB2Q14146 1524 aaKnown RBP43.13■■■■■ 4.5
YBX1P4-201ENST00000392794 ABCC8Q09428 1581 aa42.82■■■■■ 4.45
YBX1P4-201ENST00000392794 TOPBP1Q92547 1522 aa42.78■■■■■ 4.44
YBX1P4-201ENST00000392794 SUPT5HO00267 1087 aaKnown RBP42.76■■■■■ 4.44
YBX1P4-201ENST00000392794 IFT140Q96RY7 1462 aa42.74■■■■■ 4.43
YBX1P4-201ENST00000392794 DNMBPQ6XZF7 1577 aa42.67■■■■■ 4.42
YBX1P4-201ENST00000392794 OSCARQ8IYS5 282 aa42.58■■■■■ 4.41
YBX1P4-201ENST00000392794 ZNF608Q9ULD9 1512 aaPredicted RBP42.54■■■■■ 4.4
YBX1P4-201ENST00000392794 POLA1P09884 1462 aaPredicted RBP42.37■■■■■ 4.37
YBX1P4-201ENST00000392794 EIF4G3O43432 1585 aaKnown RBP42.32■■■■■ 4.37
YBX1P4-201ENST00000392794 TARBP1Q13395 1621 aaKnown RBP42.3■■■■■ 4.36
YBX1P4-201ENST00000392794 SOGA1O94964 1423 aa42.28■■■■■ 4.36
YBX1P4-201ENST00000392794 TRIM41Q8WV44 630 aa42.27■■■■■ 4.36
YBX1P4-201ENST00000392794 AQRO60306 1485 aaKnown RBP eCLIP42.26■■■■■ 4.36
YBX1P4-201ENST00000392794 RAD54L2Q9Y4B4 1467 aa42.21■■■■■ 4.35
YBX1P4-201ENST00000392794 FGD5Q6ZNL6 1462 aa42.19■■■■■ 4.34
YBX1P4-201ENST00000392794 CUX1P39880 1505 aa42.18■■■■■ 4.34
YBX1P4-201ENST00000392794 TDRD9Q8NDG6 1382 aaKnown RBP42.11■■■■■ 4.33
YBX1P4-201ENST00000392794 FBLN2P98095 1184 aa42.07■■■■■ 4.33
YBX1P4-201ENST00000392794 WDR97A6NE52 1622 aa41.98■■■■■ 4.31
YBX1P4-201ENST00000392794 CHD1O14646 1710 aa41.89■■■■■ 4.3
YBX1P4-201ENST00000392794 SNAPC4Q5SXM2 1469 aa41.85■■■■■ 4.29
YBX1P4-201ENST00000392794 GRIN2BQ13224 1484 aa41.84■■■■■ 4.29
YBX1P4-201ENST00000392794 CHMP7Q8WUX9 453 aaPredicted RBP41.81■■■■■ 4.28
YBX1P4-201ENST00000392794 RIMBP3CA6NJZ7 1639 aa41.8■■■■■ 4.28
YBX1P4-201ENST00000392794 RIMBP3BA6NNM3 1639 aa41.8■■■■■ 4.28
YBX1P4-201ENST00000392794 RIMBP3Q9UFD9 1639 aa41.8■■■■■ 4.28
YBX1P4-201ENST00000392794 MAGI1Q96QZ7 1491 aaPredicted RBP41.78■■■■■ 4.28
YBX1P4-201ENST00000392794 ARHGEF11O15085 1522 aa41.75■■■■■ 4.27
YBX1P4-201ENST00000392794 GAPVD1Q14C86 1478 aa41.75■■■■■ 4.27
YBX1P4-201ENST00000392794 WRNQ14191 1432 aaPredicted RBP eCLIP41.75■■■■■ 4.27
YBX1P4-201ENST00000392794 ABCA10Q8WWZ4 1543 aa41.74■■■■■ 4.27
YBX1P4-201ENST00000392794 TOP2BQ02880 1626 aa41.65■■■■■ 4.26
YBX1P4-201ENST00000392794 SYNJ2O15056 1496 aa41.63■■■■■ 4.25
YBX1P4-201ENST00000392794 BIVM-ERCC5R4GMW8 1640 aa41.61■■■■■ 4.25
YBX1P4-201ENST00000392794 PBRM1Q86U86 1689 aa41.59■■■■■ 4.25
YBX1P4-201ENST00000392794 SYNJ1O43426 1573 aa41.57■■■■■ 4.25
YBX1P4-201ENST00000392794 ABCA5Q8WWZ7 1642 aa41.57■■■■■ 4.25
YBX1P4-201ENST00000392794 CYB5RLQ6IPT4 315 aa41.54■■■■■ 4.24
YBX1P4-201ENST00000392794 CLASP1Q7Z460 1538 aa41.42■■■■■ 4.22
YBX1P4-201ENST00000392794 ARAP1Q96P48 1450 aa41.34■■■■■ 4.21
YBX1P4-201ENST00000392794 GRIN2AQ12879 1464 aa41.27■■■■■ 4.2
YBX1P4-201ENST00000392794 ADAMTS12P58397 1594 aa41.25■■■■■ 4.19
YBX1P4-201ENST00000392794 FHAD1B1AJZ9 1412 aa41.25■■■■■ 4.19
YBX1P4-201ENST00000392794 ERICH3Q5RHP9 1530 aa41.23■■■■■ 4.19
YBX1P4-201ENST00000392794 NUP160Q12769 1436 aa41.08■■■■■ 4.17
YBX1P4-201ENST00000392794 CEP170Q5SW79 1584 aa41.03■■■■■ 4.16
YBX1P4-201ENST00000392794 TRHP20396 242 aaPredicted RBP41.02■■■■■ 4.16
YBX1P4-201ENST00000392794 KIF27Q86VH2 1401 aa40.97■■■■■ 4.15
YBX1P4-201ENST00000392794 IGF1RP08069 1367 aa40.82■■■■■ 4.12
YBX1P4-201ENST00000392794 ERCC6L2Q5T890 1561 aa40.79■■■■■ 4.12
YBX1P4-201ENST00000392794 SHROOM2Q13796 1616 aa40.78■■■■■ 4.12
YBX1P4-201ENST00000392794 JPH4Q96JJ6 628 aa40.77■■■■■ 4.12
YBX1P4-201ENST00000392794 CUL7Q14999 1698 aa40.72■■■■■ 4.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms