RNA–Protein interactions for RNA: ENST00000399810.6

C5orf49-201, Transcript of chromosome 5 open reading frame 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C5orf49, Length 2,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf49-201ENST00000399810 NISCHQ9Y2I1 1504 aa50.53■■■■■ 5.68
C5orf49-201ENST00000399810 CCDC180Q9P1Z9 1646 aa43.79■■■■■ 4.6
C5orf49-201ENST00000399810 ZCCHC6Q5VYS8 1495 aaKnown RBP42.46■■■■■ 4.39
C5orf49-201ENST00000399810 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
C5orf49-201ENST00000399810 SHROOM4Q9ULL8 1493 aa41.75■■■■■ 4.27
C5orf49-201ENST00000399810 ABCC9O60706 1549 aa41.64■■■■■ 4.26
C5orf49-201ENST00000399810 DCAF1Q9Y4B6 1507 aa41.59■■■■■ 4.25
C5orf49-201ENST00000399810 MYO15BQ96JP2 1530 aa40.99■■■■■ 4.15
C5orf49-201ENST00000399810 NACADO15069 1562 aa40.82■■■■■ 4.12
C5orf49-201ENST00000399810 SCRIBQ14160 1630 aa40.6■■■■■ 4.09
C5orf49-201ENST00000399810 RB1CC1Q8TDY2 1594 aa40.47■■■■■ 4.07
C5orf49-201ENST00000399810 SUPT5HO00267 1087 aaKnown RBP40.25■■■■■ 4.03
C5orf49-201ENST00000399810 UNC13AQ9UPW8 1703 aa39.68■■■■□ 3.94
C5orf49-201ENST00000399810 PABPN1Q86U42 306 aaKnown RBP eCLIP39.43■■■■□ 3.9
C5orf49-201ENST00000399810 CECR2Q9BXF3 1484 aa39.4■■■■□ 3.9
C5orf49-201ENST00000399810 RSF1Q96T23 1441 aaPredicted RBP39.35■■■■□ 3.89
C5orf49-201ENST00000399810 BICRAQ9NZM4 1560 aa39.3■■■■□ 3.88
C5orf49-201ENST00000399810 MROH2BQ7Z745 1585 aa39.14■■■■□ 3.86
C5orf49-201ENST00000399810 BAZ1AQ9NRL2 1556 aaPredicted RBP38.97■■■■□ 3.83
C5orf49-201ENST00000399810 WIZO95785 1651 aa38.83■■■■□ 3.81
C5orf49-201ENST00000399810 SMARCA4P51532 1647 aa38.79■■■■□ 3.8
C5orf49-201ENST00000399810 CHIC1Q5VXU3 224 aa38.46■■■■□ 3.75
C5orf49-201ENST00000399810 TOP2AP11388 1531 aaKnown RBP38.32■■■■□ 3.72
C5orf49-201ENST00000399810 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
C5orf49-201ENST00000399810 ATAD2BQ9ULI0 1458 aa38.16■■■■□ 3.7
C5orf49-201ENST00000399810 EIF4G1Q04637 1599 aaKnown RBP38.13■■■■□ 3.69
C5orf49-201ENST00000399810 SMARCA2P51531 1590 aa38.05■■■■□ 3.68
C5orf49-201ENST00000399810 CCDC88BA6NC98 1476 aa38.04■■■■□ 3.68
C5orf49-201ENST00000399810 BAZ1BQ9UIG0 1483 aaKnown RBP37.98■■■■□ 3.67
C5orf49-201ENST00000399810 NCAPD3P42695 1498 aa37.73■■■■□ 3.63
C5orf49-201ENST00000399810 TRIM41Q8WV44 630 aa37.71■■■■□ 3.63
C5orf49-201ENST00000399810 HMGXB3Q12766 1538 aa37.63■■■■□ 3.61
C5orf49-201ENST00000399810 CC2D2AQ9P2K1 1620 aa37.55■■■■□ 3.6
C5orf49-201ENST00000399810 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
C5orf49-201ENST00000399810 FAM9AQ8IZU1 332 aaPredicted RBP37.21■■■■□ 3.55
C5orf49-201ENST00000399810 LOC105371045A0A1W2PR82 267 aa37.17■■■■□ 3.54
C5orf49-201ENST00000399810 WRNQ14191 1432 aaPredicted RBP eCLIP37.04■■■■□ 3.52
C5orf49-201ENST00000399810 CFTRP13569 1480 aa36.98■■■■□ 3.51
C5orf49-201ENST00000399810 SYNJ1O43426 1573 aa36.87■■■■□ 3.49
C5orf49-201ENST00000399810 CADPSQ9ULU8 1353 aa36.86■■■■□ 3.49
C5orf49-201ENST00000399810 EHMT2Q96KQ7 1210 aa36.84■■■■□ 3.49
C5orf49-201ENST00000399810 DNAJC5BQ9UF47 199 aa36.84■■■■□ 3.49
C5orf49-201ENST00000399810 SOGA1O94964 1423 aa36.74■■■■□ 3.47
C5orf49-201ENST00000399810 PRDM2Q13029 1718 aa36.62■■■■□ 3.45
C5orf49-201ENST00000399810 TOP2BQ02880 1626 aa36.61■■■■□ 3.45
C5orf49-201ENST00000399810 NESP48681 1621 aa36.61■■■■□ 3.45
C5orf49-201ENST00000399810 RUSC2Q8N2Y8 1516 aa36.61■■■■□ 3.45
C5orf49-201ENST00000399810 CUX1P39880 1505 aa36.56■■■■□ 3.44
C5orf49-201ENST00000399810 BIVM-ERCC5R4GMW8 1640 aa36.52■■■■□ 3.44
C5orf49-201ENST00000399810 FANCD2Q9BXW9 1451 aa36.48■■■■□ 3.43
C5orf49-201ENST00000399810 EEA1Q15075 1411 aa36.45■■■■□ 3.43
C5orf49-201ENST00000399810 CSRNP3Q8WYN3 585 aa36.45■■■■□ 3.42
C5orf49-201ENST00000399810 LAMC3Q9Y6N6 1575 aa36.38■■■■□ 3.41
C5orf49-201ENST00000399810 CEP164Q9UPV0 1460 aa36.2■■■■□ 3.39
C5orf49-201ENST00000399810 PDS5BQ9NTI5 1447 aa36.19■■■■□ 3.38
C5orf49-201ENST00000399810 FGD5Q6ZNL6 1462 aa36.15■■■■□ 3.38
C5orf49-201ENST00000399810 UBTFP17480 764 aaKnown RBP36.12■■■■□ 3.37
C5orf49-201ENST00000399810 DNMBPQ6XZF7 1577 aa36.09■■■■□ 3.37
C5orf49-201ENST00000399810 TOPBP1Q92547 1522 aa36.08■■■■□ 3.37
C5orf49-201ENST00000399810 GOLGA3Q08378 1498 aa36.08■■■■□ 3.37
C5orf49-201ENST00000399810 KIF27Q86VH2 1401 aa36.06■■■■□ 3.36
C5orf49-201ENST00000399810 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
C5orf49-201ENST00000399810 URB2Q14146 1524 aaKnown RBP36.01■■■■□ 3.36
C5orf49-201ENST00000399810 CUX2O14529 1486 aa36■■■■□ 3.35
C5orf49-201ENST00000399810 TNIKQ9UKE5 1360 aa35.99■■■■□ 3.35
C5orf49-201ENST00000399810 KIF21BO75037 1637 aa35.98■■■■□ 3.35
C5orf49-201ENST00000399810 POLA1P09884 1462 aaPredicted RBP35.94■■■■□ 3.34
C5orf49-201ENST00000399810 RAPGEF2Q9Y4G8 1499 aa35.94■■■■□ 3.34
C5orf49-201ENST00000399810 RAD54L2Q9Y4B4 1467 aa35.92■■■■□ 3.34
C5orf49-201ENST00000399810 CEP162Q5TB80 1403 aa35.9■■■■□ 3.34
C5orf49-201ENST00000399810 PRXQ9BXM0 1461 aa35.82■■■■□ 3.33
C5orf49-201ENST00000399810 IGF1RP08069 1367 aa35.76■■■■□ 3.32
C5orf49-201ENST00000399810 ABCA10Q8WWZ4 1543 aa35.75■■■■□ 3.31
C5orf49-201ENST00000399810 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
C5orf49-201ENST00000399810 ERICH3Q5RHP9 1530 aa35.7■■■■□ 3.31
C5orf49-201ENST00000399810 RANGAP1P46060 587 aaPredicted RBP35.69■■■■□ 3.3
C5orf49-201ENST00000399810 PCGF6Q9BYE7 350 aa35.65■■■■□ 3.3
C5orf49-201ENST00000399810 ERCC6Q03468 1493 aa35.64■■■■□ 3.3
C5orf49-201ENST00000399810 TDRD9Q8NDG6 1382 aaKnown RBP35.6■■■■□ 3.29
C5orf49-201ENST00000399810 CARMIL1Q5VZK9 1371 aa35.6■■■■□ 3.29
C5orf49-201ENST00000399810 CLIP1P30622 1438 aa35.57■■■■□ 3.29
C5orf49-201ENST00000399810 PPARGC1BQ86YN6 1023 aaKnown RBP35.54■■■■□ 3.28
C5orf49-201ENST00000399810 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
C5orf49-201ENST00000399810 TARBP1Q13395 1621 aaKnown RBP35.46■■■■□ 3.27
C5orf49-201ENST00000399810 WDR62O43379 1518 aa35.46■■■■□ 3.27
C5orf49-201ENST00000399810 GAPVD1Q14C86 1478 aa35.43■■■■□ 3.26
C5orf49-201ENST00000399810 TRIM26Q12899 539 aaPredicted RBP35.42■■■■□ 3.26
C5orf49-201ENST00000399810 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
C5orf49-201ENST00000399810 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.25
C5orf49-201ENST00000399810 AQRO60306 1485 aaKnown RBP eCLIP35.31■■■■□ 3.24
C5orf49-201ENST00000399810 CUL7Q14999 1698 aa35.3■■■■□ 3.24
C5orf49-201ENST00000399810 IFT140Q96RY7 1462 aa35.28■■■■□ 3.24
C5orf49-201ENST00000399810 TTBK1Q5TCY1 1321 aaPredicted RBP35.27■■■■□ 3.24
C5orf49-201ENST00000399810 ZNF608Q9ULD9 1512 aaPredicted RBP35.23■■■■□ 3.23
C5orf49-201ENST00000399810 VPS8Q8N3P4 1428 aa35.23■■■■□ 3.23
C5orf49-201ENST00000399810 ARAP1Q96P48 1450 aa35.17■■■■□ 3.22
C5orf49-201ENST00000399810 ARHGAP35Q9NRY4 1499 aa35.13■■■■□ 3.21
C5orf49-201ENST00000399810 PBRM1Q86U86 1689 aa35.13■■■■□ 3.21
C5orf49-201ENST00000399810 GRIN2BQ13224 1484 aa35.09■■■■□ 3.21
C5orf49-201ENST00000399810 APLP2Q06481 763 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms