RNA–Protein interactions for RNA: ENST00000319359.7

ELL3-201, Transcript of elongation factor for RNA polymerase II 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELL3, Length 2,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-201ENST00000319359 NISCHQ9Y2I1 1504 aa43.52■■■■■ 4.56
ELL3-201ENST00000319359 SHROOM4Q9ULL8 1493 aa37.97■■■■□ 3.67
ELL3-201ENST00000319359 SUPT5HO00267 1087 aaKnown RBP37.43■■■■□ 3.58
ELL3-201ENST00000319359 ZCCHC6Q5VYS8 1495 aaKnown RBP36.9■■■■□ 3.5
ELL3-201ENST00000319359 MYO15BQ96JP2 1530 aa36.61■■■■□ 3.45
ELL3-201ENST00000319359 CCDC180Q9P1Z9 1646 aa36.51■■■■□ 3.43
ELL3-201ENST00000319359 CHIC1Q5VXU3 224 aa36.49■■■■□ 3.43
ELL3-201ENST00000319359 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
ELL3-201ENST00000319359 HRCP23327 699 aa36.25■■■■□ 3.39
ELL3-201ENST00000319359 PCGF6Q9BYE7 350 aa36.04■■■■□ 3.36
ELL3-201ENST00000319359 PPARGC1BQ86YN6 1023 aaKnown RBP35.73■■■■□ 3.31
ELL3-201ENST00000319359 LOC105371045A0A1W2PR82 267 aa35.65■■■■□ 3.3
ELL3-201ENST00000319359 DCAF1Q9Y4B6 1507 aa35.46■■■■□ 3.27
ELL3-201ENST00000319359 TRIM26Q12899 539 aaPredicted RBP35■■■■□ 3.19
ELL3-201ENST00000319359 ABCC9O60706 1549 aa34.91■■■■□ 3.18
ELL3-201ENST00000319359 RSF1Q96T23 1441 aaPredicted RBP34.76■■■■□ 3.15
ELL3-201ENST00000319359 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
ELL3-201ENST00000319359 FAM9AQ8IZU1 332 aaPredicted RBP34.65■■■■□ 3.14
ELL3-201ENST00000319359 TRIM41Q8WV44 630 aa34.65■■■■□ 3.14
ELL3-201ENST00000319359 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
ELL3-201ENST00000319359 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
ELL3-201ENST00000319359 ZEB1P37275 1124 aaPredicted RBP34.29■■■■□ 3.08
ELL3-201ENST00000319359 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
ELL3-201ENST00000319359 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.04
ELL3-201ENST00000319359 SCAF1Q9H7N4 1312 aaKnown RBP33.87■■■■□ 3.01
ELL3-201ENST00000319359 WIZO95785 1651 aa33.86■■■■□ 3.01
ELL3-201ENST00000319359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.75■■■□□ 2.99
ELL3-201ENST00000319359 NACADO15069 1562 aa33.7■■■□□ 2.99
ELL3-201ENST00000319359 CCER1Q8TC90 406 aaPredicted RBP33.56■■■□□ 2.96
ELL3-201ENST00000319359 TTBK1Q5TCY1 1321 aaPredicted RBP33.53■■■□□ 2.96
ELL3-201ENST00000319359 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.95
ELL3-201ENST00000319359 EIF4G1Q04637 1599 aaKnown RBP33.5■■■□□ 2.95
ELL3-201ENST00000319359 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
ELL3-201ENST00000319359 PELP1Q8IZL8 1130 aaKnown RBP33.35■■■□□ 2.93
ELL3-201ENST00000319359 CCDC88BA6NC98 1476 aa33.34■■■□□ 2.93
ELL3-201ENST00000319359 NEUROD1Q13562 356 aa33.28■■■□□ 2.92
ELL3-201ENST00000319359 ACIN1Q9UKV3 1341 aaKnown RBP33.24■■■□□ 2.91
ELL3-201ENST00000319359 SOGA1O94964 1423 aa33.19■■■□□ 2.9
ELL3-201ENST00000319359 CEP162Q5TB80 1403 aa33.19■■■□□ 2.9
ELL3-201ENST00000319359 DIEXFQ68CQ4 756 aaKnown RBP33.18■■■□□ 2.9
ELL3-201ENST00000319359 TOP2AP11388 1531 aaKnown RBP33.15■■■□□ 2.9
ELL3-201ENST00000319359 WRNQ14191 1432 aaPredicted RBP eCLIP33.12■■■□□ 2.89
ELL3-201ENST00000319359 SMARCA2P51531 1590 aa33.07■■■□□ 2.88
ELL3-201ENST00000319359 RUSC2Q8N2Y8 1516 aa33.05■■■□□ 2.88
ELL3-201ENST00000319359 SMARCA4P51532 1647 aa33.03■■■□□ 2.88
ELL3-201ENST00000319359 TNIKQ9UKE5 1360 aa32.98■■■□□ 2.87
ELL3-201ENST00000319359 UBTFP17480 764 aaKnown RBP32.98■■■□□ 2.87
ELL3-201ENST00000319359 GTF3C3Q9Y5Q9 886 aa32.97■■■□□ 2.87
ELL3-201ENST00000319359 CSRNP3Q8WYN3 585 aa32.94■■■□□ 2.86
ELL3-201ENST00000319359 CENPBP07199 599 aaPredicted RBP32.83■■■□□ 2.85
ELL3-201ENST00000319359 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
ELL3-201ENST00000319359 ZNF316A6NFI3 1004 aaPredicted RBP32.73■■■□□ 2.83
ELL3-201ENST00000319359 EEA1Q15075 1411 aa32.72■■■□□ 2.83
ELL3-201ENST00000319359 GOLGA3Q08378 1498 aa32.7■■■□□ 2.82
ELL3-201ENST00000319359 HNRNPUL2Q1KMD3 747 aaKnown RBP32.67■■■□□ 2.82
ELL3-201ENST00000319359 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
ELL3-201ENST00000319359 YTHDC1Q96MU7 727 aaKnown RBP32.64■■■□□ 2.82
ELL3-201ENST00000319359 MIER1Q8N108 512 aa32.48■■■□□ 2.79
ELL3-201ENST00000319359 SYNJ1O43426 1573 aa32.48■■■□□ 2.79
ELL3-201ENST00000319359 RANGAP1P46060 587 aaPredicted RBP32.47■■■□□ 2.79
ELL3-201ENST00000319359 CLIP1P30622 1438 aa32.43■■■□□ 2.78
ELL3-201ENST00000319359 CEP164Q9UPV0 1460 aa32.43■■■□□ 2.78
ELL3-201ENST00000319359 BICRAQ9NZM4 1560 aa32.34■■■□□ 2.77
ELL3-201ENST00000319359 KIF21BO75037 1637 aa32.33■■■□□ 2.77
ELL3-201ENST00000319359 VPS8Q8N3P4 1428 aa32.3■■■□□ 2.76
ELL3-201ENST00000319359 RAPGEF2Q9Y4G8 1499 aa32.3■■■□□ 2.76
ELL3-201ENST00000319359 APLP2Q06481 763 aa32.22■■■□□ 2.75
ELL3-201ENST00000319359 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
ELL3-201ENST00000319359 BAZ1BQ9UIG0 1483 aaKnown RBP32.11■■■□□ 2.73
ELL3-201ENST00000319359 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
ELL3-201ENST00000319359 KANK4Q5T7N3 995 aaPredicted RBP31.94■■■□□ 2.7
ELL3-201ENST00000319359 DHX57Q6P158 1386 aaKnown RBP31.93■■■□□ 2.7
ELL3-201ENST00000319359 TOP2BQ02880 1626 aa31.89■■■□□ 2.69
ELL3-201ENST00000319359 ARAP1Q96P48 1450 aa31.86■■■□□ 2.69
ELL3-201ENST00000319359 PRXQ9BXM0 1461 aa31.77■■■□□ 2.68
ELL3-201ENST00000319359 CLSPNQ9HAW4 1339 aa31.72■■■□□ 2.67
ELL3-201ENST00000319359 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
ELL3-201ENST00000319359 ERICH3Q5RHP9 1530 aa31.69■■■□□ 2.66
ELL3-201ENST00000319359 MYT1Q01538 1121 aa31.66■■■□□ 2.66
ELL3-201ENST00000319359 ITGAEP38570 1179 aa31.66■■■□□ 2.66
ELL3-201ENST00000319359 RRBP1Q9P2E9 1410 aaKnown RBP31.6■■■□□ 2.65
ELL3-201ENST00000319359 SUPT16HQ9Y5B9 1047 aaKnown RBP31.59■■■□□ 2.65
ELL3-201ENST00000319359 CUX1P39880 1505 aa31.58■■■□□ 2.65
ELL3-201ENST00000319359 CCNB3Q8WWL7 1395 aa31.51■■■□□ 2.63
ELL3-201ENST00000319359 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
ELL3-201ENST00000319359 ARHGAP35Q9NRY4 1499 aa31.49■■■□□ 2.63
ELL3-201ENST00000319359 KCNH8Q96L42 1107 aa31.48■■■□□ 2.63
ELL3-201ENST00000319359 CUX2O14529 1486 aa31.43■■■□□ 2.62
ELL3-201ENST00000319359 RAB3GAP2Q9H2M9 1393 aa31.37■■■□□ 2.61
ELL3-201ENST00000319359 MAPKBP1O60336 1514 aa31.31■■■□□ 2.6
ELL3-201ENST00000319359 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
ELL3-201ENST00000319359 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
ELL3-201ENST00000319359 CFTRP13569 1480 aa31.24■■■□□ 2.59
ELL3-201ENST00000319359 SIN3AQ96ST3 1273 aa31.22■■■□□ 2.59
ELL3-201ENST00000319359 TSHZ2Q9NRE2 1034 aa31.22■■■□□ 2.59
ELL3-201ENST00000319359 IGF1RP08069 1367 aa31.2■■■□□ 2.58
ELL3-201ENST00000319359 TIAM1Q13009 1591 aa31.17■■■□□ 2.58
ELL3-201ENST00000319359 PHLDB1Q86UU1 1377 aa31.16■■■□□ 2.58
ELL3-201ENST00000319359 DDX10Q13206 875 aaKnown RBP31.16■■■□□ 2.58
ELL3-201ENST00000319359 FAM50AQ14320 339 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms