Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 PPP1R2P10-201ENST00000393023 595 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 MIR1307-201ENST00000408840 149 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 PGK1P2-201ENST00000431702 1214 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 ALDOAP1-201ENST00000491506 1078 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 RNA5SP420-201ENST00000516997 137 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 PHBP18-201ENST00000546648 813 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 MIR5091-201ENST00000578707 93 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 AC103702.1-201ENST00000548801 2630 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 AC011270.2-201ENST00000624293 2550 ntBASIC16.32■□□□□ 0.2
TMEM88BA6NKF7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 AC126365.1-201ENST00000578585 1514 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 PCDHA1-201ENST00000378133 2726 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 POP5-201ENST00000341039 913 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 SRPK2P-201ENST00000523408 1100 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 SORD2P-201ENST00000558556 1069 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 AC133555.4-201ENST00000569081 152 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 CCND3P2-201ENST00000579393 537 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 RN7SL202P-201ENST00000584410 262 ntBASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM88BA6NKF7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms