RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
MRPL55-219ENST00000391867 CCDC180Q9P1Z9 1646 aa28.44■■■□□ 2.14
MRPL55-219ENST00000391867 ABCC9O60706 1549 aa28.05■■■□□ 2.08
MRPL55-219ENST00000391867 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
MRPL55-219ENST00000391867 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
MRPL55-219ENST00000391867 NACADO15069 1562 aa26.76■■□□□ 1.87
MRPL55-219ENST00000391867 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
MRPL55-219ENST00000391867 MYO15BQ96JP2 1530 aa26.52■■□□□ 1.84
MRPL55-219ENST00000391867 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
MRPL55-219ENST00000391867 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
MRPL55-219ENST00000391867 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
MRPL55-219ENST00000391867 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
MRPL55-219ENST00000391867 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
MRPL55-219ENST00000391867 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
MRPL55-219ENST00000391867 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
MRPL55-219ENST00000391867 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
MRPL55-219ENST00000391867 CC2D2AQ9P2K1 1620 aa25.33■■□□□ 1.65
MRPL55-219ENST00000391867 CECR2Q9BXF3 1484 aa25.17■■□□□ 1.62
MRPL55-219ENST00000391867 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
MRPL55-219ENST00000391867 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
MRPL55-219ENST00000391867 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
MRPL55-219ENST00000391867 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
MRPL55-219ENST00000391867 NCAPD3P42695 1498 aa24.7■■□□□ 1.55
MRPL55-219ENST00000391867 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
MRPL55-219ENST00000391867 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
MRPL55-219ENST00000391867 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
MRPL55-219ENST00000391867 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
MRPL55-219ENST00000391867 WIZO95785 1651 aa24.45■■□□□ 1.5
MRPL55-219ENST00000391867 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
MRPL55-219ENST00000391867 NESP48681 1621 aa24.26■■□□□ 1.47
MRPL55-219ENST00000391867 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
MRPL55-219ENST00000391867 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
MRPL55-219ENST00000391867 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
MRPL55-219ENST00000391867 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
MRPL55-219ENST00000391867 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
MRPL55-219ENST00000391867 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
MRPL55-219ENST00000391867 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
MRPL55-219ENST00000391867 CUX2O14529 1486 aa23.86■■□□□ 1.41
MRPL55-219ENST00000391867 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
MRPL55-219ENST00000391867 CFTRP13569 1480 aa23.84■■□□□ 1.41
MRPL55-219ENST00000391867 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
MRPL55-219ENST00000391867 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
MRPL55-219ENST00000391867 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
MRPL55-219ENST00000391867 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
MRPL55-219ENST00000391867 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
MRPL55-219ENST00000391867 WDR62O43379 1518 aa23.63■■□□□ 1.37
MRPL55-219ENST00000391867 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
MRPL55-219ENST00000391867 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
MRPL55-219ENST00000391867 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
MRPL55-219ENST00000391867 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
MRPL55-219ENST00000391867 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
MRPL55-219ENST00000391867 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
MRPL55-219ENST00000391867 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
MRPL55-219ENST00000391867 CUX1P39880 1505 aa23.18■■□□□ 1.3
MRPL55-219ENST00000391867 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
MRPL55-219ENST00000391867 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
MRPL55-219ENST00000391867 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
MRPL55-219ENST00000391867 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
MRPL55-219ENST00000391867 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
MRPL55-219ENST00000391867 SOGA1O94964 1423 aa23.07■■□□□ 1.28
MRPL55-219ENST00000391867 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.288e-7■■■■■ 27.9
MRPL55-219ENST00000391867 TDRD9Q8NDG6 1382 aaKnown RBP23■■□□□ 1.27
MRPL55-219ENST00000391867 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
MRPL55-219ENST00000391867 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
MRPL55-219ENST00000391867 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
MRPL55-219ENST00000391867 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
MRPL55-219ENST00000391867 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
MRPL55-219ENST00000391867 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
MRPL55-219ENST00000391867 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
MRPL55-219ENST00000391867 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
MRPL55-219ENST00000391867 FBLN2P98095 1184 aa22.82■■□□□ 1.24
MRPL55-219ENST00000391867 CHD1O14646 1710 aa22.8■■□□□ 1.24
MRPL55-219ENST00000391867 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
MRPL55-219ENST00000391867 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
MRPL55-219ENST00000391867 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
MRPL55-219ENST00000391867 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
MRPL55-219ENST00000391867 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
MRPL55-219ENST00000391867 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
MRPL55-219ENST00000391867 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
MRPL55-219ENST00000391867 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
MRPL55-219ENST00000391867 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
MRPL55-219ENST00000391867 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
MRPL55-219ENST00000391867 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
MRPL55-219ENST00000391867 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
MRPL55-219ENST00000391867 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
MRPL55-219ENST00000391867 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
MRPL55-219ENST00000391867 FHAD1B1AJZ9 1412 aa22.52■■□□□ 1.2
MRPL55-219ENST00000391867 GRIN2AQ12879 1464 aa22.52■■□□□ 1.2
MRPL55-219ENST00000391867 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
MRPL55-219ENST00000391867 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
MRPL55-219ENST00000391867 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
MRPL55-219ENST00000391867 IGF1RP08069 1367 aa22.42■■□□□ 1.18
MRPL55-219ENST00000391867 NUP160Q12769 1436 aa22.4■■□□□ 1.18
MRPL55-219ENST00000391867 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
MRPL55-219ENST00000391867 CYB5RLQ6IPT4 315 aa22.37■■□□□ 1.17
MRPL55-219ENST00000391867 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
MRPL55-219ENST00000391867 CUL7Q14999 1698 aa22.33■■□□□ 1.17
MRPL55-219ENST00000391867 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
MRPL55-219ENST00000391867 ERCC6L2Q5T890 1561 aa22.28■■□□□ 1.16
MRPL55-219ENST00000391867 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms