RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
TRIM9-202ENST00000338969 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
TRIM9-202ENST00000338969 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
TRIM9-202ENST00000338969 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
TRIM9-202ENST00000338969 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
TRIM9-202ENST00000338969 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
TRIM9-202ENST00000338969 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
TRIM9-202ENST00000338969 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
TRIM9-202ENST00000338969 PCGF6Q9BYE7 350 aa27.28■■□□□ 1.96
TRIM9-202ENST00000338969 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
TRIM9-202ENST00000338969 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
TRIM9-202ENST00000338969 ABCC9O60706 1549 aa26.96■■□□□ 1.91
TRIM9-202ENST00000338969 HRCP23327 699 aa26.95■■□□□ 1.91
TRIM9-202ENST00000338969 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
TRIM9-202ENST00000338969 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
TRIM9-202ENST00000338969 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
TRIM9-202ENST00000338969 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
TRIM9-202ENST00000338969 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
TRIM9-202ENST00000338969 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
TRIM9-202ENST00000338969 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
TRIM9-202ENST00000338969 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
TRIM9-202ENST00000338969 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
TRIM9-202ENST00000338969 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRIM9-202ENST00000338969 TTBK1Q5TCY1 1321 aaPredicted RBP26.05■■□□□ 1.76
TRIM9-202ENST00000338969 NACADO15069 1562 aa25.98■■□□□ 1.75
TRIM9-202ENST00000338969 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
TRIM9-202ENST00000338969 WIZO95785 1651 aa25.76■■□□□ 1.71
TRIM9-202ENST00000338969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
TRIM9-202ENST00000338969 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
TRIM9-202ENST00000338969 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
TRIM9-202ENST00000338969 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
TRIM9-202ENST00000338969 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
TRIM9-202ENST00000338969 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
TRIM9-202ENST00000338969 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
TRIM9-202ENST00000338969 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
TRIM9-202ENST00000338969 SOGA1O94964 1423 aa25.27■■□□□ 1.64
TRIM9-202ENST00000338969 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
TRIM9-202ENST00000338969 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
TRIM9-202ENST00000338969 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
TRIM9-202ENST00000338969 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
TRIM9-202ENST00000338969 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
TRIM9-202ENST00000338969 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
TRIM9-202ENST00000338969 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
TRIM9-202ENST00000338969 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
TRIM9-202ENST00000338969 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
TRIM9-202ENST00000338969 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
TRIM9-202ENST00000338969 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
TRIM9-202ENST00000338969 DIEXFQ68CQ4 756 aaKnown RBP24.95■■□□□ 1.58
TRIM9-202ENST00000338969 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.58
TRIM9-202ENST00000338969 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
TRIM9-202ENST00000338969 APLP2Q06481 763 aa24.86■■□□□ 1.57
TRIM9-202ENST00000338969 YTHDC1Q96MU7 727 aaKnown RBP24.84■■□□□ 1.57
TRIM9-202ENST00000338969 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
TRIM9-202ENST00000338969 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
TRIM9-202ENST00000338969 ATAD2BQ9ULI0 1458 aa24.79■■□□□ 1.56
TRIM9-202ENST00000338969 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
TRIM9-202ENST00000338969 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
TRIM9-202ENST00000338969 EEA1Q15075 1411 aa24.68■■□□□ 1.54
TRIM9-202ENST00000338969 CLIP1P30622 1438 aa24.67■■□□□ 1.54
TRIM9-202ENST00000338969 GTF3C3Q9Y5Q9 886 aa24.64■■□□□ 1.53
TRIM9-202ENST00000338969 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
TRIM9-202ENST00000338969 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
TRIM9-202ENST00000338969 CENPBP07199 599 aaPredicted RBP24.6■■□□□ 1.53
TRIM9-202ENST00000338969 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
TRIM9-202ENST00000338969 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
TRIM9-202ENST00000338969 ITGAEP38570 1179 aa24.55■■□□□ 1.52
TRIM9-202ENST00000338969 MIER1Q8N108 512 aa24.44■■□□□ 1.5
TRIM9-202ENST00000338969 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
TRIM9-202ENST00000338969 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
TRIM9-202ENST00000338969 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
TRIM9-202ENST00000338969 KANK4Q5T7N3 995 aaPredicted RBP24.37■■□□□ 1.49
TRIM9-202ENST00000338969 P3H3Q8IVL6 736 aa24.3■■□□□ 1.48
TRIM9-202ENST00000338969 PELP1Q8IZL8 1130 aaKnown RBP24.26■■□□□ 1.47
TRIM9-202ENST00000338969 KIF21BO75037 1637 aa24.25■■□□□ 1.47
TRIM9-202ENST00000338969 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
TRIM9-202ENST00000338969 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
TRIM9-202ENST00000338969 CUX1P39880 1505 aa24.09■■□□□ 1.45
TRIM9-202ENST00000338969 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
TRIM9-202ENST00000338969 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
TRIM9-202ENST00000338969 CUX2O14529 1486 aa24.05■■□□□ 1.44
TRIM9-202ENST00000338969 FAM50AQ14320 339 aaKnown RBP24.05■■□□□ 1.44
TRIM9-202ENST00000338969 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.43
TRIM9-202ENST00000338969 PRXQ9BXM0 1461 aa24.01■■□□□ 1.43
TRIM9-202ENST00000338969 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
TRIM9-202ENST00000338969 CFTRP13569 1480 aa23.99■■□□□ 1.43
TRIM9-202ENST00000338969 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
TRIM9-202ENST00000338969 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
TRIM9-202ENST00000338969 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
TRIM9-202ENST00000338969 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
TRIM9-202ENST00000338969 IGF1RP08069 1367 aa23.88■■□□□ 1.41
TRIM9-202ENST00000338969 HIRIP3Q9BW71 556 aaPredicted RBP23.87■■□□□ 1.41
TRIM9-202ENST00000338969 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
TRIM9-202ENST00000338969 NESP48681 1621 aa23.86■■□□□ 1.41
TRIM9-202ENST00000338969 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
TRIM9-202ENST00000338969 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
TRIM9-202ENST00000338969 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
TRIM9-202ENST00000338969 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
TRIM9-202ENST00000338969 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
TRIM9-202ENST00000338969 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
TRIM9-202ENST00000338969 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms