RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
TRIM9-202ENST00000338969 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
TRIM9-202ENST00000338969 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
TRIM9-202ENST00000338969 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
TRIM9-202ENST00000338969 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
TRIM9-202ENST00000338969 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
TRIM9-202ENST00000338969 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
TRIM9-202ENST00000338969 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
TRIM9-202ENST00000338969 PCGF6Q9BYE7 350 aa27.28■■□□□ 1.96
TRIM9-202ENST00000338969 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
TRIM9-202ENST00000338969 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
TRIM9-202ENST00000338969 ABCC9O60706 1549 aa26.96■■□□□ 1.91
TRIM9-202ENST00000338969 HRCP23327 699 aa26.95■■□□□ 1.91
TRIM9-202ENST00000338969 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
TRIM9-202ENST00000338969 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
TRIM9-202ENST00000338969 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
TRIM9-202ENST00000338969 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
TRIM9-202ENST00000338969 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
TRIM9-202ENST00000338969 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
TRIM9-202ENST00000338969 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
TRIM9-202ENST00000338969 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
TRIM9-202ENST00000338969 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
TRIM9-202ENST00000338969 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRIM9-202ENST00000338969 TTBK1Q5TCY1 1321 aaPredicted RBP26.05■■□□□ 1.76
TRIM9-202ENST00000338969 NACADO15069 1562 aa25.98■■□□□ 1.75
TRIM9-202ENST00000338969 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
TRIM9-202ENST00000338969 WIZO95785 1651 aa25.76■■□□□ 1.71
TRIM9-202ENST00000338969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
TRIM9-202ENST00000338969 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
TRIM9-202ENST00000338969 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
TRIM9-202ENST00000338969 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
TRIM9-202ENST00000338969 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
TRIM9-202ENST00000338969 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
TRIM9-202ENST00000338969 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
TRIM9-202ENST00000338969 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
TRIM9-202ENST00000338969 SOGA1O94964 1423 aa25.27■■□□□ 1.64
TRIM9-202ENST00000338969 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
TRIM9-202ENST00000338969 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
TRIM9-202ENST00000338969 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
TRIM9-202ENST00000338969 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
TRIM9-202ENST00000338969 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
TRIM9-202ENST00000338969 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
TRIM9-202ENST00000338969 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
TRIM9-202ENST00000338969 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
TRIM9-202ENST00000338969 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
TRIM9-202ENST00000338969 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
TRIM9-202ENST00000338969 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
TRIM9-202ENST00000338969 DIEXFQ68CQ4 756 aaKnown RBP24.95■■□□□ 1.58
TRIM9-202ENST00000338969 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.58
TRIM9-202ENST00000338969 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
TRIM9-202ENST00000338969 APLP2Q06481 763 aa24.86■■□□□ 1.57
TRIM9-202ENST00000338969 YTHDC1Q96MU7 727 aaKnown RBP24.84■■□□□ 1.57
TRIM9-202ENST00000338969 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
TRIM9-202ENST00000338969 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
TRIM9-202ENST00000338969 ATAD2BQ9ULI0 1458 aa24.79■■□□□ 1.56
TRIM9-202ENST00000338969 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
TRIM9-202ENST00000338969 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
TRIM9-202ENST00000338969 EEA1Q15075 1411 aa24.68■■□□□ 1.54
TRIM9-202ENST00000338969 CLIP1P30622 1438 aa24.67■■□□□ 1.54
TRIM9-202ENST00000338969 GTF3C3Q9Y5Q9 886 aa24.64■■□□□ 1.53
TRIM9-202ENST00000338969 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
TRIM9-202ENST00000338969 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
TRIM9-202ENST00000338969 CENPBP07199 599 aaPredicted RBP24.6■■□□□ 1.53
TRIM9-202ENST00000338969 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
TRIM9-202ENST00000338969 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
TRIM9-202ENST00000338969 ITGAEP38570 1179 aa24.55■■□□□ 1.52
TRIM9-202ENST00000338969 MIER1Q8N108 512 aa24.44■■□□□ 1.5
TRIM9-202ENST00000338969 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
TRIM9-202ENST00000338969 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
TRIM9-202ENST00000338969 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
TRIM9-202ENST00000338969 KANK4Q5T7N3 995 aaPredicted RBP24.37■■□□□ 1.49
TRIM9-202ENST00000338969 P3H3Q8IVL6 736 aa24.3■■□□□ 1.48
TRIM9-202ENST00000338969 PELP1Q8IZL8 1130 aaKnown RBP24.26■■□□□ 1.47
TRIM9-202ENST00000338969 KIF21BO75037 1637 aa24.25■■□□□ 1.47
TRIM9-202ENST00000338969 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
TRIM9-202ENST00000338969 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
TRIM9-202ENST00000338969 CUX1P39880 1505 aa24.09■■□□□ 1.45
TRIM9-202ENST00000338969 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
TRIM9-202ENST00000338969 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
TRIM9-202ENST00000338969 CUX2O14529 1486 aa24.05■■□□□ 1.44
TRIM9-202ENST00000338969 FAM50AQ14320 339 aaKnown RBP24.05■■□□□ 1.44
TRIM9-202ENST00000338969 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.43
TRIM9-202ENST00000338969 PRXQ9BXM0 1461 aa24.01■■□□□ 1.43
TRIM9-202ENST00000338969 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
TRIM9-202ENST00000338969 CFTRP13569 1480 aa23.99■■□□□ 1.43
TRIM9-202ENST00000338969 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
TRIM9-202ENST00000338969 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
TRIM9-202ENST00000338969 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
TRIM9-202ENST00000338969 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
TRIM9-202ENST00000338969 IGF1RP08069 1367 aa23.88■■□□□ 1.41
TRIM9-202ENST00000338969 HIRIP3Q9BW71 556 aaPredicted RBP23.87■■□□□ 1.41
TRIM9-202ENST00000338969 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
TRIM9-202ENST00000338969 NESP48681 1621 aa23.86■■□□□ 1.41
TRIM9-202ENST00000338969 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
TRIM9-202ENST00000338969 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
TRIM9-202ENST00000338969 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
TRIM9-202ENST00000338969 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
TRIM9-202ENST00000338969 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
TRIM9-202ENST00000338969 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
TRIM9-202ENST00000338969 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms