RNA–Protein interactions for RNA: ENST00000409281.5

PLD3-204, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PLD3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-204ENST00000409281 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
PLD3-204ENST00000409281 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
PLD3-204ENST00000409281 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
PLD3-204ENST00000409281 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
PLD3-204ENST00000409281 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
PLD3-204ENST00000409281 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
PLD3-204ENST00000409281 ABCC9O60706 1549 aa27.88■■■□□ 2.05
PLD3-204ENST00000409281 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
PLD3-204ENST00000409281 NACADO15069 1562 aa27.26■■□□□ 1.95
PLD3-204ENST00000409281 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
PLD3-204ENST00000409281 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
PLD3-204ENST00000409281 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
PLD3-204ENST00000409281 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
PLD3-204ENST00000409281 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
PLD3-204ENST00000409281 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
PLD3-204ENST00000409281 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.8
PLD3-204ENST00000409281 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
PLD3-204ENST00000409281 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
PLD3-204ENST00000409281 PABPN1Q86U42 306 aaKnown RBP eCLIP26.2■■□□□ 1.79
PLD3-204ENST00000409281 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
PLD3-204ENST00000409281 WIZO95785 1651 aa26.05■■□□□ 1.76
PLD3-204ENST00000409281 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
PLD3-204ENST00000409281 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
PLD3-204ENST00000409281 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
PLD3-204ENST00000409281 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
PLD3-204ENST00000409281 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
PLD3-204ENST00000409281 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
PLD3-204ENST00000409281 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
PLD3-204ENST00000409281 ATAD2BQ9ULI0 1458 aa25.41■■□□□ 1.66
PLD3-204ENST00000409281 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
PLD3-204ENST00000409281 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
PLD3-204ENST00000409281 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
PLD3-204ENST00000409281 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
PLD3-204ENST00000409281 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
PLD3-204ENST00000409281 HMGXB3Q12766 1538 aa25.11■■□□□ 1.61
PLD3-204ENST00000409281 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
PLD3-204ENST00000409281 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
PLD3-204ENST00000409281 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
PLD3-204ENST00000409281 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
PLD3-204ENST00000409281 SOGA1O94964 1423 aa24.77■■□□□ 1.56
PLD3-204ENST00000409281 EEA1Q15075 1411 aa24.76■■□□□ 1.55
PLD3-204ENST00000409281 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
PLD3-204ENST00000409281 PCGF6Q9BYE7 350 aa24.72■■□□□ 1.55
PLD3-204ENST00000409281 CFTRP13569 1480 aa24.69■■□□□ 1.54
PLD3-204ENST00000409281 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
PLD3-204ENST00000409281 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
PLD3-204ENST00000409281 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
PLD3-204ENST00000409281 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
PLD3-204ENST00000409281 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
PLD3-204ENST00000409281 HRCP23327 699 aa24.61■■□□□ 1.53
PLD3-204ENST00000409281 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
PLD3-204ENST00000409281 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
PLD3-204ENST00000409281 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
PLD3-204ENST00000409281 CUX1P39880 1505 aa24.48■■□□□ 1.51
PLD3-204ENST00000409281 GOLGA3Q08378 1498 aa24.46■■□□□ 1.51
PLD3-204ENST00000409281 KIF21BO75037 1637 aa24.44■■□□□ 1.5
PLD3-204ENST00000409281 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
PLD3-204ENST00000409281 NESP48681 1621 aa24.39■■□□□ 1.5
PLD3-204ENST00000409281 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
PLD3-204ENST00000409281 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
PLD3-204ENST00000409281 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
PLD3-204ENST00000409281 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
PLD3-204ENST00000409281 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
PLD3-204ENST00000409281 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
PLD3-204ENST00000409281 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
PLD3-204ENST00000409281 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
PLD3-204ENST00000409281 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
PLD3-204ENST00000409281 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.45
PLD3-204ENST00000409281 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
PLD3-204ENST00000409281 CLIP1P30622 1438 aa24.1■■□□□ 1.45
PLD3-204ENST00000409281 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
PLD3-204ENST00000409281 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
PLD3-204ENST00000409281 CUX2O14529 1486 aa24.07■■□□□ 1.44
PLD3-204ENST00000409281 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
PLD3-204ENST00000409281 IGF1RP08069 1367 aa23.98■■□□□ 1.43
PLD3-204ENST00000409281 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
PLD3-204ENST00000409281 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
PLD3-204ENST00000409281 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
PLD3-204ENST00000409281 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
PLD3-204ENST00000409281 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
PLD3-204ENST00000409281 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
PLD3-204ENST00000409281 ZEB1P37275 1124 aaPredicted RBP23.89■■□□□ 1.41
PLD3-204ENST00000409281 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
PLD3-204ENST00000409281 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
PLD3-204ENST00000409281 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
PLD3-204ENST00000409281 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
PLD3-204ENST00000409281 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
PLD3-204ENST00000409281 WDR62O43379 1518 aa23.8■■□□□ 1.4
PLD3-204ENST00000409281 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
PLD3-204ENST00000409281 TTBK1Q5TCY1 1321 aaPredicted RBP23.79■■□□□ 1.4
PLD3-204ENST00000409281 CUL7Q14999 1698 aa23.74■■□□□ 1.39
PLD3-204ENST00000409281 APLP2Q06481 763 aa23.74■■□□□ 1.39
PLD3-204ENST00000409281 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
PLD3-204ENST00000409281 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.39
PLD3-204ENST00000409281 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
PLD3-204ENST00000409281 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
PLD3-204ENST00000409281 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
PLD3-204ENST00000409281 CTTNBP2Q8WZ74 1663 aa23.57■■□□□ 1.36
PLD3-204ENST00000409281 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
PLD3-204ENST00000409281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms