RNA–Protein interactions for RNA: ENST00000221418.8

ECH1-201, Transcript of enoyl-CoA hydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECH1, Length 1,411 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-201ENST00000221418 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
ECH1-201ENST00000221418 ABCC9O60706 1549 aa28.34■■■□□ 2.13
ECH1-201ENST00000221418 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
ECH1-201ENST00000221418 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
ECH1-201ENST00000221418 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
ECH1-201ENST00000221418 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
ECH1-201ENST00000221418 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
ECH1-201ENST00000221418 NACADO15069 1562 aa25.81■■□□□ 1.72
ECH1-201ENST00000221418 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
ECH1-201ENST00000221418 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
ECH1-201ENST00000221418 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
ECH1-201ENST00000221418 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
ECH1-201ENST00000221418 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
ECH1-201ENST00000221418 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
ECH1-201ENST00000221418 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
ECH1-201ENST00000221418 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
ECH1-201ENST00000221418 CUX2O14529 1486 aa24.95■■□□□ 1.58
ECH1-201ENST00000221418 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
ECH1-201ENST00000221418 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
ECH1-201ENST00000221418 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
ECH1-201ENST00000221418 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
ECH1-201ENST00000221418 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
ECH1-201ENST00000221418 NESP48681 1621 aa23.95■■□□□ 1.42
ECH1-201ENST00000221418 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
ECH1-201ENST00000221418 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
ECH1-201ENST00000221418 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
ECH1-201ENST00000221418 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
ECH1-201ENST00000221418 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
ECH1-201ENST00000221418 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
ECH1-201ENST00000221418 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.36
ECH1-201ENST00000221418 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
ECH1-201ENST00000221418 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
ECH1-201ENST00000221418 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
ECH1-201ENST00000221418 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
ECH1-201ENST00000221418 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
ECH1-201ENST00000221418 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
ECH1-201ENST00000221418 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
ECH1-201ENST00000221418 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
ECH1-201ENST00000221418 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.32
ECH1-201ENST00000221418 WDR62O43379 1518 aa23.29■■□□□ 1.32
ECH1-201ENST00000221418 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
ECH1-201ENST00000221418 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
ECH1-201ENST00000221418 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
ECH1-201ENST00000221418 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
ECH1-201ENST00000221418 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
ECH1-201ENST00000221418 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
ECH1-201ENST00000221418 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
ECH1-201ENST00000221418 ILDR1Q86SU0 546 aaPredicted RBP22.97■■□□□ 1.27
ECH1-201ENST00000221418 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
ECH1-201ENST00000221418 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
ECH1-201ENST00000221418 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
ECH1-201ENST00000221418 ARAP1Q96P48 1450 aa22.91■■□□□ 1.26
ECH1-201ENST00000221418 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
ECH1-201ENST00000221418 WIZO95785 1651 aa22.75■■□□□ 1.23
ECH1-201ENST00000221418 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
ECH1-201ENST00000221418 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
ECH1-201ENST00000221418 IFT140Q96RY7 1462 aa22.56■■□□□ 1.2
ECH1-201ENST00000221418 CFTRP13569 1480 aa22.53■■□□□ 1.2
ECH1-201ENST00000221418 CHD1O14646 1710 aa22.52■■□□□ 1.2
ECH1-201ENST00000221418 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
ECH1-201ENST00000221418 FBLN2P98095 1184 aa22.48■■□□□ 1.19
ECH1-201ENST00000221418 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
ECH1-201ENST00000221418 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.168e-7■■■■■ 59.6
ECH1-201ENST00000221418 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
ECH1-201ENST00000221418 CLASP1Q7Z460 1538 aa22.25■■□□□ 1.15
ECH1-201ENST00000221418 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
ECH1-201ENST00000221418 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
ECH1-201ENST00000221418 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
ECH1-201ENST00000221418 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
ECH1-201ENST00000221418 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
ECH1-201ENST00000221418 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
ECH1-201ENST00000221418 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
ECH1-201ENST00000221418 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
ECH1-201ENST00000221418 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
ECH1-201ENST00000221418 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
ECH1-201ENST00000221418 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
ECH1-201ENST00000221418 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
ECH1-201ENST00000221418 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
ECH1-201ENST00000221418 FBXO41Q8TF61 875 aa21.9■■□□□ 1.1
ECH1-201ENST00000221418 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
ECH1-201ENST00000221418 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
ECH1-201ENST00000221418 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
ECH1-201ENST00000221418 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
ECH1-201ENST00000221418 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
ECH1-201ENST00000221418 SOGA1O94964 1423 aa21.82■■□□□ 1.08
ECH1-201ENST00000221418 FAM69CQ0P6D2 419 aa21.81■■□□□ 1.08
ECH1-201ENST00000221418 HECW2Q9P2P5 1572 aa21.81■■□□□ 1.08
ECH1-201ENST00000221418 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
ECH1-201ENST00000221418 KDM6BO15054 1643 aa21.76■■□□□ 1.07
ECH1-201ENST00000221418 WDR97A6NE52 1622 aa21.76■■□□□ 1.07
ECH1-201ENST00000221418 LMTK3Q96Q04 1460 aa21.73■■□□□ 1.07
ECH1-201ENST00000221418 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
ECH1-201ENST00000221418 ADGRL1O94910 1474 aa21.67■■□□□ 1.06
ECH1-201ENST00000221418 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
ECH1-201ENST00000221418 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
ECH1-201ENST00000221418 SOCS7O14512 581 aa21.61■■□□□ 1.05
ECH1-201ENST00000221418 DIP2BQ9P265 1576 aa21.58■■□□□ 1.05
ECH1-201ENST00000221418 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
ECH1-201ENST00000221418 NPM1P06748 294 aaKnown RBP eCLIP21.55■■□□□ 1.04
ECH1-201ENST00000221418 TSPOAP1O95153 1857 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms