RNA–Protein interactions for RNA: ENST00000263672.10

SPCS2-201, Transcript of signal peptidase complex subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPCS2, Length 2,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2-201ENST00000263672 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
SPCS2-201ENST00000263672 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
SPCS2-201ENST00000263672 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
SPCS2-201ENST00000263672 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
SPCS2-201ENST00000263672 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
SPCS2-201ENST00000263672 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.15
SPCS2-201ENST00000263672 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
SPCS2-201ENST00000263672 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
SPCS2-201ENST00000263672 ABCC9O60706 1549 aa27.35■■□□□ 1.97
SPCS2-201ENST00000263672 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
SPCS2-201ENST00000263672 MYO15BQ96JP2 1530 aa27.27■■□□□ 1.96
SPCS2-201ENST00000263672 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
SPCS2-201ENST00000263672 NACADO15069 1562 aa26.87■■□□□ 1.89
SPCS2-201ENST00000263672 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
SPCS2-201ENST00000263672 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
SPCS2-201ENST00000263672 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.85
SPCS2-201ENST00000263672 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
SPCS2-201ENST00000263672 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
SPCS2-201ENST00000263672 WIZO95785 1651 aa26.41■■□□□ 1.82
SPCS2-201ENST00000263672 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.81
SPCS2-201ENST00000263672 FAM9AQ8IZU1 332 aaPredicted RBP26.36■■□□□ 1.81
SPCS2-201ENST00000263672 EHMT2Q96KQ7 1210 aa26.29■■□□□ 1.8
SPCS2-201ENST00000263672 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
SPCS2-201ENST00000263672 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
SPCS2-201ENST00000263672 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
SPCS2-201ENST00000263672 HRCP23327 699 aa26.04■■□□□ 1.76
SPCS2-201ENST00000263672 SMARCA4P51532 1647 aa26■■□□□ 1.75
SPCS2-201ENST00000263672 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
SPCS2-201ENST00000263672 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
SPCS2-201ENST00000263672 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
SPCS2-201ENST00000263672 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
SPCS2-201ENST00000263672 ABCC8Q09428 1581 aa25.79■■□□□ 1.72
SPCS2-201ENST00000263672 TRIM26Q12899 539 aaPredicted RBP25.78■■□□□ 1.72
SPCS2-201ENST00000263672 PPARGC1BQ86YN6 1023 aaKnown RBP25.78■■□□□ 1.72
SPCS2-201ENST00000263672 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
SPCS2-201ENST00000263672 SOGA1O94964 1423 aa25.48■■□□□ 1.67
SPCS2-201ENST00000263672 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
SPCS2-201ENST00000263672 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
SPCS2-201ENST00000263672 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
SPCS2-201ENST00000263672 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
SPCS2-201ENST00000263672 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
SPCS2-201ENST00000263672 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
SPCS2-201ENST00000263672 CSRNP3Q8WYN3 585 aa25.25■■□□□ 1.63
SPCS2-201ENST00000263672 UBTFP17480 764 aaKnown RBP25.25■■□□□ 1.63
SPCS2-201ENST00000263672 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
SPCS2-201ENST00000263672 CEP162Q5TB80 1403 aa25.18■■□□□ 1.62
SPCS2-201ENST00000263672 TNIKQ9UKE5 1360 aa25.07■■□□□ 1.6
SPCS2-201ENST00000263672 EEA1Q15075 1411 aa25.06■■□□□ 1.6
SPCS2-201ENST00000263672 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
SPCS2-201ENST00000263672 GOLGA3Q08378 1498 aa24.99■■□□□ 1.59
SPCS2-201ENST00000263672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.99■■□□□ 1.59
SPCS2-201ENST00000263672 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
SPCS2-201ENST00000263672 NCAPD3P42695 1498 aa24.9■■□□□ 1.58
SPCS2-201ENST00000263672 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
SPCS2-201ENST00000263672 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
SPCS2-201ENST00000263672 HMGXB3Q12766 1538 aa24.84■■□□□ 1.57
SPCS2-201ENST00000263672 CCER1Q8TC90 406 aaPredicted RBP24.84■■□□□ 1.57
SPCS2-201ENST00000263672 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
SPCS2-201ENST00000263672 KIF21BO75037 1637 aa24.78■■□□□ 1.56
SPCS2-201ENST00000263672 CLIP1P30622 1438 aa24.76■■□□□ 1.55
SPCS2-201ENST00000263672 CUX1P39880 1505 aa24.71■■□□□ 1.55
SPCS2-201ENST00000263672 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
SPCS2-201ENST00000263672 CFTRP13569 1480 aa24.67■■□□□ 1.54
SPCS2-201ENST00000263672 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
SPCS2-201ENST00000263672 VPS8Q8N3P4 1428 aa24.57■■□□□ 1.52
SPCS2-201ENST00000263672 APLP2Q06481 763 aa24.55■■□□□ 1.52
SPCS2-201ENST00000263672 CC2D2AQ9P2K1 1620 aa24.52■■□□□ 1.52
SPCS2-201ENST00000263672 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
SPCS2-201ENST00000263672 KIF27Q86VH2 1401 aa24.5■■□□□ 1.51
SPCS2-201ENST00000263672 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
SPCS2-201ENST00000263672 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
SPCS2-201ENST00000263672 CUX2O14529 1486 aa24.4■■□□□ 1.5
SPCS2-201ENST00000263672 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
SPCS2-201ENST00000263672 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
SPCS2-201ENST00000263672 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
SPCS2-201ENST00000263672 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
SPCS2-201ENST00000263672 NESP48681 1621 aa24.3■■□□□ 1.48
SPCS2-201ENST00000263672 IGF1RP08069 1367 aa24.29■■□□□ 1.48
SPCS2-201ENST00000263672 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
SPCS2-201ENST00000263672 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
SPCS2-201ENST00000263672 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
SPCS2-201ENST00000263672 CARMIL1Q5VZK9 1371 aa24.2■■□□□ 1.46
SPCS2-201ENST00000263672 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
SPCS2-201ENST00000263672 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
SPCS2-201ENST00000263672 DIEXFQ68CQ4 756 aaKnown RBP24.15■■□□□ 1.46
SPCS2-201ENST00000263672 ITGAEP38570 1179 aa24.11■■□□□ 1.45
SPCS2-201ENST00000263672 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
SPCS2-201ENST00000263672 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
SPCS2-201ENST00000263672 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
SPCS2-201ENST00000263672 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
SPCS2-201ENST00000263672 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
SPCS2-201ENST00000263672 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
SPCS2-201ENST00000263672 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
SPCS2-201ENST00000263672 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
SPCS2-201ENST00000263672 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
SPCS2-201ENST00000263672 RRBP1Q9P2E9 1410 aaKnown RBP23.92■■□□□ 1.42
SPCS2-201ENST00000263672 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
SPCS2-201ENST00000263672 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
SPCS2-201ENST00000263672 DHX57Q6P158 1386 aaKnown RBP23.89■■□□□ 1.41
SPCS2-201ENST00000263672 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms