RNA–Protein interactions for RNA: ENST00000378045.4

FUNDC1-201, Transcript of FUN14 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUNDC1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-201ENST00000378045 NISCHQ9Y2I1 1504 aa31.68■■■□□ 2.66
FUNDC1-201ENST00000378045 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
FUNDC1-201ENST00000378045 ABCC9O60706 1549 aa28.23■■■□□ 2.11
FUNDC1-201ENST00000378045 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
FUNDC1-201ENST00000378045 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
FUNDC1-201ENST00000378045 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
FUNDC1-201ENST00000378045 NACADO15069 1562 aa26.68■■□□□ 1.86
FUNDC1-201ENST00000378045 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
FUNDC1-201ENST00000378045 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
FUNDC1-201ENST00000378045 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
FUNDC1-201ENST00000378045 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
FUNDC1-201ENST00000378045 DNAJC5BQ9UF47 199 aa26.21■■□□□ 1.79
FUNDC1-201ENST00000378045 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
FUNDC1-201ENST00000378045 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
FUNDC1-201ENST00000378045 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
FUNDC1-201ENST00000378045 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
FUNDC1-201ENST00000378045 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
FUNDC1-201ENST00000378045 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
FUNDC1-201ENST00000378045 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
FUNDC1-201ENST00000378045 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
FUNDC1-201ENST00000378045 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
FUNDC1-201ENST00000378045 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
FUNDC1-201ENST00000378045 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
FUNDC1-201ENST00000378045 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
FUNDC1-201ENST00000378045 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
FUNDC1-201ENST00000378045 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
FUNDC1-201ENST00000378045 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
FUNDC1-201ENST00000378045 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
FUNDC1-201ENST00000378045 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
FUNDC1-201ENST00000378045 NESP48681 1621 aa24.33■■□□□ 1.49
FUNDC1-201ENST00000378045 ERCC6Q03468 1493 aa24.32■■□□□ 1.48
FUNDC1-201ENST00000378045 WIZO95785 1651 aa24.26■■□□□ 1.47
FUNDC1-201ENST00000378045 CUX2O14529 1486 aa24.09■■□□□ 1.45
FUNDC1-201ENST00000378045 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
FUNDC1-201ENST00000378045 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
FUNDC1-201ENST00000378045 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
FUNDC1-201ENST00000378045 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
FUNDC1-201ENST00000378045 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
FUNDC1-201ENST00000378045 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
FUNDC1-201ENST00000378045 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
FUNDC1-201ENST00000378045 DNAJC5Q9H3Z4 198 aa23.79■■□□□ 1.4
FUNDC1-201ENST00000378045 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
FUNDC1-201ENST00000378045 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
FUNDC1-201ENST00000378045 FANCD2Q9BXW9 1451 aa23.69■■□□□ 1.38
FUNDC1-201ENST00000378045 WDR62O43379 1518 aa23.67■■□□□ 1.38
FUNDC1-201ENST00000378045 CFTRP13569 1480 aa23.67■■□□□ 1.38
FUNDC1-201ENST00000378045 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
FUNDC1-201ENST00000378045 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
FUNDC1-201ENST00000378045 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
FUNDC1-201ENST00000378045 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
FUNDC1-201ENST00000378045 DNMBPQ6XZF7 1577 aa23.22■■□□□ 1.31
FUNDC1-201ENST00000378045 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
FUNDC1-201ENST00000378045 ZNF608Q9ULD9 1512 aaPredicted RBP23.21■■□□□ 1.31
FUNDC1-201ENST00000378045 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
FUNDC1-201ENST00000378045 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
FUNDC1-201ENST00000378045 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
FUNDC1-201ENST00000378045 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
FUNDC1-201ENST00000378045 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
FUNDC1-201ENST00000378045 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
FUNDC1-201ENST00000378045 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
FUNDC1-201ENST00000378045 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
FUNDC1-201ENST00000378045 CUX1P39880 1505 aa23■■□□□ 1.27
FUNDC1-201ENST00000378045 OSCARQ8IYS5 282 aa23■■□□□ 1.27
FUNDC1-201ENST00000378045 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
FUNDC1-201ENST00000378045 CHD1O14646 1710 aa22.95■■□□□ 1.26
FUNDC1-201ENST00000378045 SOGA1O94964 1423 aa22.91■■□□□ 1.26
FUNDC1-201ENST00000378045 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
FUNDC1-201ENST00000378045 RIMBP3CA6NJZ7 1639 aa22.84■■□□□ 1.25
FUNDC1-201ENST00000378045 RIMBP3BA6NNM3 1639 aa22.84■■□□□ 1.25
FUNDC1-201ENST00000378045 RIMBP3Q9UFD9 1639 aa22.84■■□□□ 1.25
FUNDC1-201ENST00000378045 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
FUNDC1-201ENST00000378045 FBLN2P98095 1184 aa22.82■■□□□ 1.24
FUNDC1-201ENST00000378045 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
FUNDC1-201ENST00000378045 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
FUNDC1-201ENST00000378045 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
FUNDC1-201ENST00000378045 ARHGEF11O15085 1522 aa22.75■■□□□ 1.23
FUNDC1-201ENST00000378045 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
FUNDC1-201ENST00000378045 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
FUNDC1-201ENST00000378045 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
FUNDC1-201ENST00000378045 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
FUNDC1-201ENST00000378045 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
FUNDC1-201ENST00000378045 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
FUNDC1-201ENST00000378045 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
FUNDC1-201ENST00000378045 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
FUNDC1-201ENST00000378045 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
FUNDC1-201ENST00000378045 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
FUNDC1-201ENST00000378045 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
FUNDC1-201ENST00000378045 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
FUNDC1-201ENST00000378045 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
FUNDC1-201ENST00000378045 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
FUNDC1-201ENST00000378045 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
FUNDC1-201ENST00000378045 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
FUNDC1-201ENST00000378045 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
FUNDC1-201ENST00000378045 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
FUNDC1-201ENST00000378045 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
FUNDC1-201ENST00000378045 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
FUNDC1-201ENST00000378045 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
FUNDC1-201ENST00000378045 NUP160Q12769 1436 aa22.3■■□□□ 1.16
FUNDC1-201ENST00000378045 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
FUNDC1-201ENST00000378045 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms