RNA–Protein interactions for RNA: ENST00000300574.2

CRK-201, Transcript of CRK proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRK, Length 3,880 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRK-201ENST00000300574 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
CRK-201ENST00000300574 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
CRK-201ENST00000300574 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
CRK-201ENST00000300574 SUPT5HO00267 1087 aaKnown RBP26.91■■□□□ 1.9
CRK-201ENST00000300574 ABCC9O60706 1549 aa26.38■■□□□ 1.81
CRK-201ENST00000300574 HRCP23327 699 aa25.91■■□□□ 1.74
CRK-201ENST00000300574 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
CRK-201ENST00000300574 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
CRK-201ENST00000300574 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
CRK-201ENST00000300574 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
CRK-201ENST00000300574 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
CRK-201ENST00000300574 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
CRK-201ENST00000300574 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
CRK-201ENST00000300574 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
CRK-201ENST00000300574 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
CRK-201ENST00000300574 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
CRK-201ENST00000300574 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
CRK-201ENST00000300574 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
CRK-201ENST00000300574 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
CRK-201ENST00000300574 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
CRK-201ENST00000300574 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
CRK-201ENST00000300574 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
CRK-201ENST00000300574 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
CRK-201ENST00000300574 ZEB1P37275 1124 aaPredicted RBP24.41■■□□□ 1.5
CRK-201ENST00000300574 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
CRK-201ENST00000300574 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
CRK-201ENST00000300574 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
CRK-201ENST00000300574 NACADO15069 1562 aa24.23■■□□□ 1.47
CRK-201ENST00000300574 UBTFP17480 764 aaKnown RBP24.11■■□□□ 1.45
CRK-201ENST00000300574 MYT1Q01538 1121 aa24.08■■□□□ 1.45
CRK-201ENST00000300574 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
CRK-201ENST00000300574 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
CRK-201ENST00000300574 NEUROD1Q13562 356 aa24.03■■□□□ 1.44
CRK-201ENST00000300574 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
CRK-201ENST00000300574 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
CRK-201ENST00000300574 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
CRK-201ENST00000300574 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
CRK-201ENST00000300574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
CRK-201ENST00000300574 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
CRK-201ENST00000300574 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
CRK-201ENST00000300574 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
CRK-201ENST00000300574 APLP2Q06481 763 aa23.61■■□□□ 1.37
CRK-201ENST00000300574 FBLN2P98095 1184 aa23.53■■□□□ 1.36
CRK-201ENST00000300574 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
CRK-201ENST00000300574 WIZO95785 1651 aa23.49■■□□□ 1.35
CRK-201ENST00000300574 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
CRK-201ENST00000300574 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
CRK-201ENST00000300574 P3H3Q8IVL6 736 aa23.41■■□□□ 1.34
CRK-201ENST00000300574 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
CRK-201ENST00000300574 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
CRK-201ENST00000300574 ITGAEP38570 1179 aa23.29■■□□□ 1.32
CRK-201ENST00000300574 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
CRK-201ENST00000300574 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
CRK-201ENST00000300574 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
CRK-201ENST00000300574 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
CRK-201ENST00000300574 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
CRK-201ENST00000300574 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
CRK-201ENST00000300574 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
CRK-201ENST00000300574 MIER1Q8N108 512 aa23.1■■□□□ 1.29
CRK-201ENST00000300574 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
CRK-201ENST00000300574 SOGA1O94964 1423 aa22.99■■□□□ 1.27
CRK-201ENST00000300574 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
CRK-201ENST00000300574 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
CRK-201ENST00000300574 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
CRK-201ENST00000300574 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
CRK-201ENST00000300574 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
CRK-201ENST00000300574 NESP48681 1621 aa22.79■■□□□ 1.24
CRK-201ENST00000300574 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
CRK-201ENST00000300574 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
CRK-201ENST00000300574 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
CRK-201ENST00000300574 BCANQ96GW7 911 aa22.73■■□□□ 1.23
CRK-201ENST00000300574 BCL11AQ9H165 835 aa22.73■■□□□ 1.23
CRK-201ENST00000300574 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
CRK-201ENST00000300574 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
CRK-201ENST00000300574 FAM50AQ14320 339 aaKnown RBP22.71■■□□□ 1.23
CRK-201ENST00000300574 ANP32EQ9BTT0 268 aa22.68■■□□□ 1.22
CRK-201ENST00000300574 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
CRK-201ENST00000300574 MYT1LQ9UL68 1186 aa22.65■■□□□ 1.22
CRK-201ENST00000300574 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
CRK-201ENST00000300574 CUX2O14529 1486 aa22.63■■□□□ 1.21
CRK-201ENST00000300574 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
CRK-201ENST00000300574 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
CRK-201ENST00000300574 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
CRK-201ENST00000300574 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
CRK-201ENST00000300574 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
CRK-201ENST00000300574 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
CRK-201ENST00000300574 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
CRK-201ENST00000300574 CLIP1P30622 1438 aa22.45■■□□□ 1.18
CRK-201ENST00000300574 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
CRK-201ENST00000300574 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
CRK-201ENST00000300574 FKBP8Q14318 412 aa22.36■■□□□ 1.17
CRK-201ENST00000300574 CLSPNQ9HAW4 1339 aa22.33■■□□□ 1.17
CRK-201ENST00000300574 GOLGA3Q08378 1498 aa22.33■■□□□ 1.16
CRK-201ENST00000300574 NEFLP07196 543 aa22.32■■□□□ 1.16
CRK-201ENST00000300574 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
CRK-201ENST00000300574 CHIC2Q9UKJ5 165 aa22.31■■□□□ 1.16
CRK-201ENST00000300574 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
CRK-201ENST00000300574 ERICH6Q7L0X2 663 aa22.29■■□□□ 1.16
CRK-201ENST00000300574 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.16
CRK-201ENST00000300574 CFTRP13569 1480 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms